RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 GLTPD2A6NH11 291 aa12.93□□□□□ -0.34
SMC1A-206ENST00000470241 SEMA3EO15041 775 aa12.93□□□□□ -0.34
SMC1A-206ENST00000470241 FRAT2O75474 233 aaPredicted RBP12.93□□□□□ -0.34
SMC1A-206ENST00000470241 DDNO94850 711 aaPredicted RBP12.93□□□□□ -0.34
SMC1A-206ENST00000470241 MCAMP43121 646 aa12.93□□□□□ -0.34
SMC1A-206ENST00000470241 CHAF1AQ13111 956 aaPredicted RBP12.93□□□□□ -0.34
SMC1A-206ENST00000470241 TNIP1Q15025 636 aa12.93□□□□□ -0.34
SMC1A-206ENST00000470241 GPC2Q8N158 579 aa12.93□□□□□ -0.34
SMC1A-206ENST00000470241 FBXW7Q969H0 707 aa12.93□□□□□ -0.34
SMC1A-206ENST00000470241 HMG20BQ9P0W2 317 aa12.93□□□□□ -0.34
SMC1A-206ENST00000470241 ZBTB47Q9UFB7 747 aaPredicted RBP12.93□□□□□ -0.34
SMC1A-206ENST00000470241 DENND2AQ9ULE3 1009 aa12.93□□□□□ -0.34
SMC1A-206ENST00000470241 GJA3Q9Y6H8 435 aa12.93□□□□□ -0.34
SMC1A-206ENST00000470241 TIAM2Q8IVF5 1701 aa12.93□□□□□ -0.34
SMC1A-206ENST00000470241 DICER1Q9UPY3 1922 aaKnown RBP12.92□□□□□ -0.34
SMC1A-206ENST00000470241 DPY19L2Q6NUT2 758 aa12.92□□□□□ -0.34
SMC1A-206ENST00000470241 RSBN1LQ6PCB5 846 aaPredicted RBP12.92□□□□□ -0.34
SMC1A-206ENST00000470241 PI16Q6UXB8 463 aa12.92□□□□□ -0.34
SMC1A-206ENST00000470241 CERS5Q8N5B7 392 aa12.92□□□□□ -0.34
SMC1A-206ENST00000470241 SPATA5Q8NB90 893 aa12.92□□□□□ -0.34
SMC1A-206ENST00000470241 ECHDC1Q9NTX5 307 aa12.92□□□□□ -0.34
SMC1A-206ENST00000470241 ZBTB12Q9Y330 459 aaPredicted RBP12.92□□□□□ -0.34
SMC1A-206ENST00000470241 PDS5AQ29RF7 1337 aaKnown RBP12.91□□□□□ -0.34
SMC1A-206ENST00000470241 CCDC88AQ3V6T2 1871 aa12.91□□□□□ -0.34
SMC1A-206ENST00000470241 SCN9AQ15858 1988 aa12.91□□□□□ -0.34
SMC1A-206ENST00000470241 ATP5JP18859 108 aa12.91□□□□□ -0.34
SMC1A-206ENST00000470241 PDE4AP27815 886 aa12.91□□□□□ -0.34
SMC1A-206ENST00000470241 GMPSP49915 693 aaPredicted RBP12.91□□□□□ -0.34
SMC1A-206ENST00000470241 FKBP1AP62942 108 aaKnown RBP12.91□□□□□ -0.34
SMC1A-206ENST00000470241 TSHZ3Q63HK5 1081 aa12.91□□□□□ -0.34
SMC1A-206ENST00000470241 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.91□□□□□ -0.34
SMC1A-206ENST00000470241 GMLQ99445 158 aa12.91□□□□□ -0.34
SMC1A-206ENST00000470241 SNRKQ9NRH2 765 aa12.91□□□□□ -0.34
SMC1A-206ENST00000470241 MX1P20591 662 aa12.9□□□□□ -0.34
SMC1A-206ENST00000470241 SCNN1DP51172 638 aa12.9□□□□□ -0.34
SMC1A-206ENST00000470241 GRIK5Q16478 980 aa12.9□□□□□ -0.34
SMC1A-206ENST00000470241 MFSD14BQ5SR56 506 aa12.9□□□□□ -0.34
SMC1A-206ENST00000470241 AGBL3Q8NEM8 1001 aa12.9□□□□□ -0.34
SMC1A-206ENST00000470241 WDR66Q8TBY9 1149 aa12.9□□□□□ -0.34
SMC1A-206ENST00000470241 PI4K2BQ8TCG2 481 aa12.9□□□□□ -0.34
SMC1A-206ENST00000470241 TBC1D22AQ8WUA7 517 aa12.9□□□□□ -0.34
SMC1A-206ENST00000470241 L3MBTL3Q96JM7 780 aaPredicted RBP12.9□□□□□ -0.34
SMC1A-206ENST00000470241 STAP2Q9UGK3 403 aa12.9□□□□□ -0.34
SMC1A-206ENST00000470241 NDUFB9Q9Y6M9 179 aa12.9□□□□□ -0.34
SMC1A-206ENST00000470241 TTC41PQ6P2S7 1318 aa12.89□□□□□ -0.35
SMC1A-206ENST00000470241 SALL1Q9NSC2 1324 aa12.89□□□□□ -0.35
SMC1A-206ENST00000470241 SHTN1A0MZ66 631 aa12.89□□□□□ -0.35
SMC1A-206ENST00000470241 POTECB2RU33 542 aa12.89□□□□□ -0.35
SMC1A-206ENST00000470241 CYP2E1P05181 493 aaPredicted RBP12.89□□□□□ -0.35
SMC1A-206ENST00000470241 RPS12P25398 132 aaKnown RBP12.89□□□□□ -0.35
SMC1A-206ENST00000470241 ZAP70P43403 619 aa12.89□□□□□ -0.35
SMC1A-206ENST00000470241 PDE1AP54750 535 aa12.89□□□□□ -0.35
SMC1A-206ENST00000470241 TBC1D9Q6ZT07 1266 aa12.89□□□□□ -0.35
SMC1A-206ENST00000470241 PLEKHM2Q8IWE5 1019 aa12.89□□□□□ -0.35
SMC1A-206ENST00000470241 DPF2Q92785 391 aa12.89□□□□□ -0.35
SMC1A-206ENST00000470241 GPATCH3Q96I76 525 aa12.89□□□□□ -0.35
SMC1A-206ENST00000470241 BOLA2Q9H3K6 86 aa12.89□□□□□ -0.35
SMC1A-206ENST00000470241 CHD4Q14839 1912 aa12.89□□□□□ -0.35
SMC1A-206ENST00000470241 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
SMC1A-206ENST00000470241 YY1P25490 414 aa12.88□□□□□ -0.35
SMC1A-206ENST00000470241 SKAP1Q86WV1 359 aa12.88□□□□□ -0.35
SMC1A-206ENST00000470241 KIAA0825Q8IV33 1275 aa12.88□□□□□ -0.35
SMC1A-206ENST00000470241 HAUS7Q99871 368 aa12.88□□□□□ -0.35
SMC1A-206ENST00000470241 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
SMC1A-206ENST00000470241 GPRC5DQ9NZD1 345 aa12.88□□□□□ -0.35
SMC1A-206ENST00000470241 ZNF646O15015 1829 aaPredicted RBP12.88□□□□□ -0.35
SMC1A-206ENST00000470241 F8W031 263 aaPredicted RBP12.87□□□□□ -0.35
SMC1A-206ENST00000470241 GLRX3O76003 335 aaKnown RBP12.87□□□□□ -0.35
SMC1A-206ENST00000470241 USP17L8P0C7I0 530 aa12.87□□□□□ -0.35
SMC1A-206ENST00000470241 PRDX5P30044 214 aa12.87□□□□□ -0.35
SMC1A-206ENST00000470241 ZNF280AP59817 542 aaPredicted RBP12.87□□□□□ -0.35
SMC1A-206ENST00000470241 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
SMC1A-206ENST00000470241 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
SMC1A-206ENST00000470241 EDC3Q96F86 508 aaKnown RBP12.87□□□□□ -0.35
SMC1A-206ENST00000470241 DNAJC2Q99543 621 aaKnown RBP12.87□□□□□ -0.35
SMC1A-206ENST00000470241 OSBPL3Q9H4L5 887 aa12.87□□□□□ -0.35
SMC1A-206ENST00000470241 PIH1D3Q9NQM4 214 aaKnown RBP12.87□□□□□ -0.35
SMC1A-206ENST00000470241 CNOT7Q9UIV1 285 aaKnown RBP12.87□□□□□ -0.35
SMC1A-206ENST00000470241 SUGT1Q9Y2Z0 365 aa12.87□□□□□ -0.35
SMC1A-206ENST00000470241 GOLIM4O00461 696 aa12.86□□□□□ -0.35
SMC1A-206ENST00000470241 ERC2O15083 957 aa12.86□□□□□ -0.35
SMC1A-206ENST00000470241 EPS15P42566 896 aa12.86□□□□□ -0.35
SMC1A-206ENST00000470241 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
SMC1A-206ENST00000470241 NMRK2Q9NPI5 230 aa12.86□□□□□ -0.35
SMC1A-206ENST00000470241 ABCF2Q9UG63 623 aa12.86□□□□□ -0.35
SMC1A-206ENST00000470241 TTF2Q9UNY4 1162 aaKnown RBP12.86□□□□□ -0.35
SMC1A-206ENST00000470241 AOX1Q06278 1338 aa12.86□□□□□ -0.35
SMC1A-206ENST00000470241 PSME4Q14997 1843 aa12.85□□□□□ -0.35
SMC1A-206ENST00000470241 WDR90Q96KV7 1748 aa12.85□□□□□ -0.35
SMC1A-206ENST00000470241 LDHBP07195 334 aaKnown RBP12.85□□□□□ -0.35
SMC1A-206ENST00000470241 LMOD1P29536 600 aaPredicted RBP12.85□□□□□ -0.35
SMC1A-206ENST00000470241 ERICH6Q7L0X2 663 aa12.85□□□□□ -0.35
SMC1A-206ENST00000470241 ZNF384Q8TF68 577 aa12.85□□□□□ -0.35
SMC1A-206ENST00000470241 RRAGCQ9HB90 399 aa12.85□□□□□ -0.35
SMC1A-206ENST00000470241 PAG1Q9NWQ8 432 aa12.85□□□□□ -0.35
SMC1A-206ENST00000470241 HACL1Q9UJ83 578 aa12.85□□□□□ -0.35
SMC1A-206ENST00000470241 GTF3C3Q9Y5Q9 886 aa12.85□□□□□ -0.35
SMC1A-206ENST00000470241 IQCA1LA6NCM1 817 aa12.84□□□□□ -0.35
SMC1A-206ENST00000470241 H7C1D1 291 aa12.84□□□□□ -0.35
SMC1A-206ENST00000470241 MAP4K4O95819 1239 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms