RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 GPC2Q8N158 579 aa23.39■■□□□ 1.33
PCCB-208ENST00000468777 TNIP1Q15025 636 aa23.37■■□□□ 1.33
PCCB-208ENST00000468777 C16orf71Q8IYS4 520 aaPredicted RBP23.37■■□□□ 1.33
PCCB-208ENST00000468777 RASGRF1Q13972 1273 aa23.36■■□□□ 1.33
PCCB-208ENST00000468777 SCARF1Q14162 830 aa23.36■■□□□ 1.33
PCCB-208ENST00000468777 DACT2Q5SW24 774 aa23.36■■□□□ 1.33
PCCB-208ENST00000468777 PI16Q6UXB8 463 aa23.36■■□□□ 1.33
PCCB-208ENST00000468777 GNL3LQ9NVN8 582 aaKnown RBP23.36■■□□□ 1.33
PCCB-208ENST00000468777 VIL1P09327 827 aaKnown RBP23.36■■□□□ 1.33
PCCB-208ENST00000468777 TTC39AQ5SRH9 613 aa23.36■■□□□ 1.33
PCCB-208ENST00000468777 STRIP1Q5VSL9 837 aa23.36■■□□□ 1.33
PCCB-208ENST00000468777 CCDC158Q5M9N0 1113 aa23.35■■□□□ 1.33
PCCB-208ENST00000468777 OTUD7AQ8TE49 926 aaPredicted RBP23.35■■□□□ 1.33
PCCB-208ENST00000468777 LNPKQ9C0E8 428 aa23.35■■□□□ 1.33
PCCB-208ENST00000468777 GMPSP49915 693 aaPredicted RBP23.34■■□□□ 1.33
PCCB-208ENST00000468777 RSBN1LQ6PCB5 846 aaPredicted RBP23.34■■□□□ 1.33
PCCB-208ENST00000468777 ZBTB47Q9UFB7 747 aaPredicted RBP23.34■■□□□ 1.33
PCCB-208ENST00000468777 ARID4AP29374 1257 aaPredicted RBP23.34■■□□□ 1.33
PCCB-208ENST00000468777 MCAMP43121 646 aa23.34■■□□□ 1.33
PCCB-208ENST00000468777 SCNN1DP51172 638 aa23.34■■□□□ 1.33
PCCB-208ENST00000468777 CERS5Q8N5B7 392 aa23.34■■□□□ 1.33
PCCB-208ENST00000468777 SHTN1A0MZ66 631 aa23.33■■□□□ 1.33
PCCB-208ENST00000468777 TSHZ3Q63HK5 1081 aa23.33■■□□□ 1.33
PCCB-208ENST00000468777 NDUFB9Q9Y6M9 179 aa23.33■■□□□ 1.33
PCCB-208ENST00000468777 AKAP11Q9UKA4 1901 aa23.33■■□□□ 1.33
PCCB-208ENST00000468777 FAM205AQ6ZU69 1335 aa23.33■■□□□ 1.32
PCCB-208ENST00000468777 MFSD14BQ5SR56 506 aa23.32■■□□□ 1.32
PCCB-208ENST00000468777 SNRKQ9NRH2 765 aa23.32■■□□□ 1.32
PCCB-208ENST00000468777 HMG20BQ9P0W2 317 aa23.32■■□□□ 1.32
PCCB-208ENST00000468777 NUCB1Q02818 461 aa23.32■■□□□ 1.32
PCCB-208ENST00000468777 NMRK2Q9NPI5 230 aa23.32■■□□□ 1.32
PCCB-208ENST00000468777 TSHZ2Q9NRE2 1034 aa23.32■■□□□ 1.32
PCCB-208ENST00000468777 DENND2AQ9ULE3 1009 aa23.32■■□□□ 1.32
PCCB-208ENST00000468777 WDR90Q96KV7 1748 aa23.32■■□□□ 1.32
PCCB-208ENST00000468777 UQCRFS1P1P0C7P4 283 aa23.31■■□□□ 1.32
PCCB-208ENST00000468777 CHD1LQ86WJ1 897 aa23.31■■□□□ 1.32
PCCB-208ENST00000468777 POTECB2RU33 542 aa23.3■■□□□ 1.32
PCCB-208ENST00000468777 F8W031 263 aaPredicted RBP23.3■■□□□ 1.32
PCCB-208ENST00000468777 SEMA3EO15041 775 aa23.3■■□□□ 1.32
PCCB-208ENST00000468777 GRIK5Q16478 980 aa23.3■■□□□ 1.32
PCCB-208ENST00000468777 KIAA0825Q8IV33 1275 aa23.3■■□□□ 1.32
PCCB-208ENST00000468777 SPATA5Q8NB90 893 aa23.3■■□□□ 1.32
PCCB-208ENST00000468777 L3MBTL3Q96JM7 780 aaPredicted RBP23.3■■□□□ 1.32
PCCB-208ENST00000468777 GMLQ99445 158 aa23.3■■□□□ 1.32
PCCB-208ENST00000468777 RRAGCQ9HB90 399 aa23.3■■□□□ 1.32
PCCB-208ENST00000468777 ZNF784Q8NCA9 323 aaPredicted RBP23.3■■□□□ 1.32
PCCB-208ENST00000468777 EPS15P42566 896 aa23.29■■□□□ 1.32
PCCB-208ENST00000468777 GPBP1L1Q9HC44 474 aaPredicted RBP23.29■■□□□ 1.32
PCCB-208ENST00000468777 GPRC5DQ9NZD1 345 aa23.29■■□□□ 1.32
PCCB-208ENST00000468777 MICALL2Q8IY33 904 aa23.28■■□□□ 1.32
PCCB-208ENST00000468777 AGBL3Q8NEM8 1001 aa23.28■■□□□ 1.32
PCCB-208ENST00000468777 CNOT7Q9UIV1 285 aaKnown RBP23.28■■□□□ 1.32
PCCB-208ENST00000468777 RPS12P25398 132 aaKnown RBP23.28■■□□□ 1.32
PCCB-208ENST00000468777 TBC1D9Q6ZT07 1266 aa23.28■■□□□ 1.32
PCCB-208ENST00000468777 WDR66Q8TBY9 1149 aa23.28■■□□□ 1.32
PCCB-208ENST00000468777 ZNF512BQ96KM6 892 aaPredicted RBP23.28■■□□□ 1.32
PCCB-208ENST00000468777 MYO3BQ8WXR4 1341 aa23.27■■□□□ 1.32
PCCB-208ENST00000468777 ZAP70P43403 619 aa23.27■■□□□ 1.32
PCCB-208ENST00000468777 DPF2Q92785 391 aa23.27■■□□□ 1.32
PCCB-208ENST00000468777 BOLA2Q9H3K6 86 aa23.27■■□□□ 1.32
PCCB-208ENST00000468777 ECHDC1Q9NTX5 307 aa23.27■■□□□ 1.32
PCCB-208ENST00000468777 ABCF2Q9UG63 623 aa23.27■■□□□ 1.32
PCCB-208ENST00000468777 SCN4AP35499 1836 aa23.27■■□□□ 1.32
PCCB-208ENST00000468777 SALL3Q9BXA9 1300 aa23.27■■□□□ 1.32
PCCB-208ENST00000468777 MYO5AQ9Y4I1 1855 aaKnown RBP23.26■■□□□ 1.31
PCCB-208ENST00000468777 MX1P20591 662 aa23.26■■□□□ 1.31
PCCB-208ENST00000468777 LMOD1P29536 600 aaPredicted RBP23.26■■□□□ 1.31
PCCB-208ENST00000468777 PRDX5P30044 214 aa23.26■■□□□ 1.31
PCCB-208ENST00000468777 TBC1D22AQ8WUA7 517 aa23.26■■□□□ 1.31
PCCB-208ENST00000468777 EGFRP00533 1210 aa23.26■■□□□ 1.31
PCCB-208ENST00000468777 USP17L8P0C7I0 530 aa23.26■■□□□ 1.31
PCCB-208ENST00000468777 FKBP1AP62942 108 aaKnown RBP23.26■■□□□ 1.31
PCCB-208ENST00000468777 DNAJC2Q99543 621 aaKnown RBP23.26■■□□□ 1.31
PCCB-208ENST00000468777 HACL1Q9UJ83 578 aa23.26■■□□□ 1.31
PCCB-208ENST00000468777 PDS5AQ29RF7 1337 aaKnown RBP23.26■■□□□ 1.31
PCCB-208ENST00000468777 CYP2E1P05181 493 aaPredicted RBP23.25■■□□□ 1.31
PCCB-208ENST00000468777 ATP5JP18859 108 aa23.25■■□□□ 1.31
PCCB-208ENST00000468777 SAMD7Q7Z3H4 446 aa23.25■■□□□ 1.31
PCCB-208ENST00000468777 ADAMTSL1Q8N6G6 1762 aa23.25■■□□□ 1.31
PCCB-208ENST00000468777 ZBTB22O15209 634 aa23.24■■□□□ 1.31
PCCB-208ENST00000468777 EDC3Q96F86 508 aaKnown RBP23.24■■□□□ 1.31
PCCB-208ENST00000468777 GPATCH3Q96I76 525 aa23.24■■□□□ 1.31
PCCB-208ENST00000468777 ANTXR1Q9H6X2 564 aa23.24■■□□□ 1.31
PCCB-208ENST00000468777 TTF2Q9UNY4 1162 aaKnown RBP23.24■■□□□ 1.31
PCCB-208ENST00000468777 IQCA1LA6NCM1 817 aa23.24■■□□□ 1.31
PCCB-208ENST00000468777 VEGFAP15692 232 aaPredicted RBP23.24■■□□□ 1.31
PCCB-208ENST00000468777 RBM26Q5T8P6 1007 aaKnown RBP23.24■■□□□ 1.31
PCCB-208ENST00000468777 TAF1DQ9H5J8 278 aaPredicted RBP23.24■■□□□ 1.31
PCCB-208ENST00000468777 SALL1Q9NSC2 1324 aa23.24■■□□□ 1.31
PCCB-208ENST00000468777 PDE4AP27815 886 aa23.23■■□□□ 1.31
PCCB-208ENST00000468777 EPHX2P34913 555 aa23.23■■□□□ 1.31
PCCB-208ENST00000468777 TBC1D10BQ4KMP7 808 aaPredicted RBP23.23■■□□□ 1.31
PCCB-208ENST00000468777 SKAP1Q86WV1 359 aa23.23■■□□□ 1.31
PCCB-208ENST00000468777 OGFOD1Q8N543 542 aa23.23■■□□□ 1.31
PCCB-208ENST00000468777 H7C1D1 291 aa23.22■■□□□ 1.31
PCCB-208ENST00000468777 PI4K2BQ8TCG2 481 aa23.22■■□□□ 1.31
PCCB-208ENST00000468777 TRPM4Q8TD43 1214 aa23.22■■□□□ 1.31
PCCB-208ENST00000468777 PCDHAC2Q9Y5I4 1007 aa23.22■■□□□ 1.31
PCCB-208ENST00000468777 TTC41PQ6P2S7 1318 aa23.22■■□□□ 1.31
PCCB-208ENST00000468777 LDHBP07195 334 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms