RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 EGFRP00533 1210 aa6.89□□□□□ -1.31
SSR3-204ENST00000467733 DPYDQ12882 1025 aa6.89□□□□□ -1.31
SSR3-204ENST00000467733 VTI1AQ96AJ9 217 aa6.89□□□□□ -1.31
SSR3-204ENST00000467733 MYO19Q96H55 970 aa6.89□□□□□ -1.31
SSR3-204ENST00000467733 RBSNQ9H1K0 784 aa6.89□□□□□ -1.31
SSR3-204ENST00000467733 QTRT2Q9H974 415 aaKnown RBP6.89□□□□□ -1.31
SSR3-204ENST00000467733 TLR7Q9NYK1 1049 aaKnown RBP6.89□□□□□ -1.31
SSR3-204ENST00000467733 TFIP11Q9UBB9 837 aaKnown RBP6.89□□□□□ -1.31
SSR3-204ENST00000467733 FAM135AQ9P2D6 1515 aa6.88□□□□□ -1.31
SSR3-204ENST00000467733 FAM196BA6NMK8 535 aa6.88□□□□□ -1.31
SSR3-204ENST00000467733 PSAPP07602 524 aa6.88□□□□□ -1.31
SSR3-204ENST00000467733 CD97P48960 835 aa6.88□□□□□ -1.31
SSR3-204ENST00000467733 PTK7Q13308 1070 aa6.88□□□□□ -1.31
SSR3-204ENST00000467733 C11orf91Q3C1V1 193 aa6.88□□□□□ -1.31
SSR3-204ENST00000467733 Q6ZS46 218 aa6.88□□□□□ -1.31
SSR3-204ENST00000467733 CACTIN-AS1Q8N1I8 211 aa6.88□□□□□ -1.31
SSR3-204ENST00000467733 GLMNQ92990 594 aa6.88□□□□□ -1.31
SSR3-204ENST00000467733 PLD4Q96BZ4 506 aa6.88□□□□□ -1.31
SSR3-204ENST00000467733 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.88□□□□□ -1.31
SSR3-204ENST00000467733 MED14O60244 1454 aa6.87□□□□□ -1.31
SSR3-204ENST00000467733 A2MP01023 1474 aa6.87□□□□□ -1.31
SSR3-204ENST00000467733 ARHGAP35Q9NRY4 1499 aa6.87□□□□□ -1.31
SSR3-204ENST00000467733 GHRHP01286 108 aa6.87□□□□□ -1.31
SSR3-204ENST00000467733 HOXD8P13378 290 aaPredicted RBP6.87□□□□□ -1.31
SSR3-204ENST00000467733 SOX18P35713 384 aa6.87□□□□□ -1.31
SSR3-204ENST00000467733 CRTC2Q53ET0 693 aaPredicted RBP6.87□□□□□ -1.31
SSR3-204ENST00000467733 HFE2Q6ZVN8 426 aa6.87□□□□□ -1.31
SSR3-204ENST00000467733 ANKMY2Q8IV38 441 aa6.87□□□□□ -1.31
SSR3-204ENST00000467733 MUC3BQ9H195 1237 aa6.87□□□□□ -1.31
SSR3-204ENST00000467733 RTCBQ9Y3I0 505 aaKnown RBP6.87□□□□□ -1.31
SSR3-204ENST00000467733 GTF3C3Q9Y5Q9 886 aa6.87□□□□□ -1.31
SSR3-204ENST00000467733 CCDC18Q5T9S5 1454 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 XIRP1Q702N8 1843 aaKnown RBP6.86□□□□□ -1.31
SSR3-204ENST00000467733 LOC102724428A0A0B4J2F2 783 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 USP17L15C9J2P7 530 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 USP17L10C9JJH3 530 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 USP17L13C9JLJ4 530 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 USP17L12C9JPN9 530 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 USP17L11C9JVI0 530 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 USP17L21D6R901 530 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 USP17L18D6R9N7 530 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 USP17L22D6RA61 530 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 USP17L17D6RBQ6 530 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 USP17L19D6RCP7 530 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 USP17L20D6RJB6 530 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 XYLBO75191 536 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 SSTR4P31391 388 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 TXKP42681 527 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 SIK1P57059 783 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 USP17L24Q0WX57 530 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 LRRC7Q96NW7 1537 aa6.86□□□□□ -1.31
SSR3-204ENST00000467733 ZC3H13Q5T200 1668 aaKnown RBP6.85□□□□□ -1.31
SSR3-204ENST00000467733 WEE1P30291 646 aa6.85□□□□□ -1.31
SSR3-204ENST00000467733 IRAK1P51617 712 aa6.85□□□□□ -1.31
SSR3-204ENST00000467733 GDF6Q6KF10 455 aaPredicted RBP6.85□□□□□ -1.31
SSR3-204ENST00000467733 IL22RA1Q8N6P7 574 aa6.85□□□□□ -1.31
SSR3-204ENST00000467733 KRTAP9-9Q9BYP9 154 aa6.85□□□□□ -1.31
SSR3-204ENST00000467733 KRTAP9-4Q9BYQ2 154 aa6.85□□□□□ -1.31
SSR3-204ENST00000467733 RGS17Q9UGC6 210 aaPredicted RBP6.85□□□□□ -1.31
SSR3-204ENST00000467733 RAXQ9Y2V3 346 aa6.85□□□□□ -1.31
SSR3-204ENST00000467733 KDM5DQ9BY66 1539 aa6.85□□□□□ -1.31
SSR3-204ENST00000467733 PZPP20742 1482 aa6.85□□□□□ -1.31
SSR3-204ENST00000467733 PLEKHH2Q8IVE3 1493 aa6.85□□□□□ -1.31
SSR3-204ENST00000467733 NPHP4O75161 1426 aaPredicted RBP6.84□□□□□ -1.31
SSR3-204ENST00000467733 TNRQ92752 1358 aa6.84□□□□□ -1.31
SSR3-204ENST00000467733 SPAG9O60271 1321 aaKnown RBP6.84□□□□□ -1.31
SSR3-204ENST00000467733 ALX3O95076 343 aa6.84□□□□□ -1.31
SSR3-204ENST00000467733 GLB1P16278 677 aa6.84□□□□□ -1.31
SSR3-204ENST00000467733 KANK4Q5T7N3 995 aaPredicted RBP6.84□□□□□ -1.31
SSR3-204ENST00000467733 NLRP1Q9C000 1473 aa6.84□□□□□ -1.31
SSR3-204ENST00000467733 UGGT1Q9NYU2 1555 aa6.83□□□□□ -1.32
SSR3-204ENST00000467733 KIAA1324LA8MWY0 1029 aaPredicted RBP6.83□□□□□ -1.32
SSR3-204ENST00000467733 DHX15O43143 795 aaKnown RBP6.83□□□□□ -1.32
SSR3-204ENST00000467733 COBLO75128 1261 aa6.83□□□□□ -1.32
SSR3-204ENST00000467733 LGR5O75473 907 aa6.83□□□□□ -1.32
SSR3-204ENST00000467733 IGLV1-40P01703 118 aa6.83□□□□□ -1.32
SSR3-204ENST00000467733 SETDB1Q15047 1291 aa6.83□□□□□ -1.32
SSR3-204ENST00000467733 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.83□□□□□ -1.32
SSR3-204ENST00000467733 NSUN5Q96P11 429 aaKnown RBP6.83□□□□□ -1.32
SSR3-204ENST00000467733 FMNL2Q96PY5 1086 aa6.83□□□□□ -1.32
SSR3-204ENST00000467733 PPP1R12CQ9BZL4 782 aa6.83□□□□□ -1.32
SSR3-204ENST00000467733 KIAA1107Q9UPP5 1409 aa6.83□□□□□ -1.32
SSR3-204ENST00000467733 J3QW42 95 aa6.82□□□□□ -1.32
SSR3-204ENST00000467733 OPLAHO14841 1288 aa6.82□□□□□ -1.32
SSR3-204ENST00000467733 PROSER2Q86WR7 435 aaPredicted RBP6.82□□□□□ -1.32
SSR3-204ENST00000467733 TREML1Q86YW5 311 aa6.82□□□□□ -1.32
SSR3-204ENST00000467733 RGL4Q8IZJ4 473 aa6.82□□□□□ -1.32
SSR3-204ENST00000467733 CMTR1Q8N1G2 835 aaKnown RBP6.82□□□□□ -1.32
SSR3-204ENST00000467733 CEP41Q9BYV8 373 aa6.82□□□□□ -1.32
SSR3-204ENST00000467733 VRTNQ9H8Y1 702 aa6.82□□□□□ -1.32
SSR3-204ENST00000467733 STOML1Q9UBI4 398 aa6.82□□□□□ -1.32
SSR3-204ENST00000467733 PPME1Q9Y570 386 aa6.82□□□□□ -1.32
SSR3-204ENST00000467733 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.82□□□□□ -1.32
SSR3-204ENST00000467733 GPATCH8Q9UKJ3 1502 aaKnown RBP6.81□□□□□ -1.32
SSR3-204ENST00000467733 MMP20O60882 483 aa6.81□□□□□ -1.32
SSR3-204ENST00000467733 YBX3P16989 372 aaKnown RBP eCLIP6.81□□□□□ -1.32
SSR3-204ENST00000467733 UVSSAQ2YD98 709 aa6.81□□□□□ -1.32
SSR3-204ENST00000467733 ANKLE2Q86XL3 938 aa6.81□□□□□ -1.32
SSR3-204ENST00000467733 CASKIN1Q8WXD9 1431 aa6.81□□□□□ -1.32
SSR3-204ENST00000467733 FYCO1Q9BQS8 1478 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms