RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 BRI3BPQ8WY22 251 aa11.97□□□□□ -0.49
ABCF3-205ENST00000466416 OPTNQ96CV9 577 aa11.97□□□□□ -0.49
ABCF3-205ENST00000466416 SHISA4Q96DD7 197 aa11.97□□□□□ -0.49
ABCF3-205ENST00000466416 CCDC85AQ96PX6 553 aaPredicted RBP11.97□□□□□ -0.49
ABCF3-205ENST00000466416 LAMB1P07942 1786 aa11.97□□□□□ -0.49
ABCF3-205ENST00000466416 SSC5DA1L4H1 1573 aa11.96□□□□□ -0.49
ABCF3-205ENST00000466416 CCL15-CCL14A0A0B4J2E2 113 aa11.96□□□□□ -0.49
ABCF3-205ENST00000466416 TLR2O60603 784 aa11.96□□□□□ -0.49
ABCF3-205ENST00000466416 GJB1P08034 283 aa11.96□□□□□ -0.49
ABCF3-205ENST00000466416 GJA8P48165 433 aa11.96□□□□□ -0.49
ABCF3-205ENST00000466416 LACTBP83111 547 aaPredicted RBP11.96□□□□□ -0.49
ABCF3-205ENST00000466416 CCL15Q16663 113 aa11.96□□□□□ -0.49
ABCF3-205ENST00000466416 KRT24Q2M2I5 525 aa11.96□□□□□ -0.49
ABCF3-205ENST00000466416 ELP3Q9H9T3 547 aa11.96□□□□□ -0.49
ABCF3-205ENST00000466416 COL6A3P12111 3177 aa11.95□□□□□ -0.5
ABCF3-205ENST00000466416 SOX1O00570 391 aaPredicted RBP11.95□□□□□ -0.5
ABCF3-205ENST00000466416 GOLGA2Q08379 1002 aa11.95□□□□□ -0.5
ABCF3-205ENST00000466416 MTFR1Q15390 333 aa11.95□□□□□ -0.5
ABCF3-205ENST00000466416 TXNRD3Q86VQ6 643 aa11.95□□□□□ -0.5
ABCF3-205ENST00000466416 HELBQ8NG08 1087 aaPredicted RBP11.95□□□□□ -0.5
ABCF3-205ENST00000466416 LRCH3Q96II8 777 aa11.95□□□□□ -0.5
ABCF3-205ENST00000466416 ZCCHC17Q9NP64 241 aaKnown RBP11.95□□□□□ -0.5
ABCF3-205ENST00000466416 CWC25Q9NXE8 425 aaPredicted RBP11.95□□□□□ -0.5
ABCF3-205ENST00000466416 SPDYE2BA6NHP3 402 aa11.94□□□□□ -0.5
ABCF3-205ENST00000466416 SPDYE6P0CI01 402 aa11.94□□□□□ -0.5
ABCF3-205ENST00000466416 CAPN2P17655 700 aa11.94□□□□□ -0.5
ABCF3-205ENST00000466416 HOXD10P28358 340 aa11.94□□□□□ -0.5
ABCF3-205ENST00000466416 RASA3Q14644 834 aa11.94□□□□□ -0.5
ABCF3-205ENST00000466416 CFAP100Q494V2 611 aa11.94□□□□□ -0.5
ABCF3-205ENST00000466416 FAM43AQ8N2R8 423 aa11.94□□□□□ -0.5
ABCF3-205ENST00000466416 MYD88Q99836 296 aa11.94□□□□□ -0.5
ABCF3-205ENST00000466416 ANKRD2Q9GZV1 360 aa11.94□□□□□ -0.5
ABCF3-205ENST00000466416 VEZTQ9HBM0 779 aa11.94□□□□□ -0.5
ABCF3-205ENST00000466416 CLRN2A0PK11 232 aa11.93□□□□□ -0.5
ABCF3-205ENST00000466416 GRK4P32298 578 aa11.93□□□□□ -0.5
ABCF3-205ENST00000466416 TMPOP42166 694 aaKnown RBP11.93□□□□□ -0.5
ABCF3-205ENST00000466416 CTSWP56202 376 aa11.93□□□□□ -0.5
ABCF3-205ENST00000466416 MAP3K9P80192 1104 aa11.93□□□□□ -0.5
ABCF3-205ENST00000466416 TNFAIP1Q13829 316 aa11.93□□□□□ -0.5
ABCF3-205ENST00000466416 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.93□□□□□ -0.5
ABCF3-205ENST00000466416 TTLL11Q8NHH1 800 aa11.93□□□□□ -0.5
ABCF3-205ENST00000466416 JARID2Q92833 1246 aaPredicted RBP11.93□□□□□ -0.5
ABCF3-205ENST00000466416 PRMT6Q96LA8 375 aaPredicted RBP11.93□□□□□ -0.5
ABCF3-205ENST00000466416 ARHGAP39Q9C0H5 1083 aa11.93□□□□□ -0.5
ABCF3-205ENST00000466416 SRRDQ9UH36 339 aa11.93□□□□□ -0.5
ABCF3-205ENST00000466416 STXBP5LQ9Y2K9 1186 aa11.93□□□□□ -0.5
ABCF3-205ENST00000466416 EVI5O60447 810 aa11.92□□□□□ -0.5
ABCF3-205ENST00000466416 CETPP11597 493 aa11.92□□□□□ -0.5
ABCF3-205ENST00000466416 CCL5P13501 91 aa11.92□□□□□ -0.5
ABCF3-205ENST00000466416 IGHMBP2P38935 993 aaKnown RBP11.92□□□□□ -0.5
ABCF3-205ENST00000466416 FKBP1AP62942 108 aaKnown RBP11.92□□□□□ -0.5
ABCF3-205ENST00000466416 UBXN2AP68543 259 aa11.92□□□□□ -0.5
ABCF3-205ENST00000466416 RAET1EQ8TD07 263 aa11.92□□□□□ -0.5
ABCF3-205ENST00000466416 TRIM47Q96LD4 638 aa11.92□□□□□ -0.5
ABCF3-205ENST00000466416 RNF208Q9H0X6 261 aa11.92□□□□□ -0.5
ABCF3-205ENST00000466416 CD209Q9NNX6 404 aa11.92□□□□□ -0.5
ABCF3-205ENST00000466416 ZNF646O15015 1829 aaPredicted RBP11.92□□□□□ -0.5
ABCF3-205ENST00000466416 FARP2O94887 1054 aaPredicted RBP11.91□□□□□ -0.5
ABCF3-205ENST00000466416 BMP8BP34820 402 aa11.91□□□□□ -0.5
ABCF3-205ENST00000466416 CERS5Q8N5B7 392 aa11.91□□□□□ -0.5
ABCF3-205ENST00000466416 DEFB123Q8N688 67 aa11.91□□□□□ -0.5
ABCF3-205ENST00000466416 CNKSR2Q8WXI2 1034 aa11.91□□□□□ -0.5
ABCF3-205ENST00000466416 METTL22Q9BUU2 404 aaPredicted RBP11.91□□□□□ -0.5
ABCF3-205ENST00000466416 COL25A1Q9BXS0 654 aaPredicted RBP11.91□□□□□ -0.5
ABCF3-205ENST00000466416 GREM2Q9H772 168 aa11.91□□□□□ -0.5
ABCF3-205ENST00000466416 STAP2Q9UGK3 403 aa11.91□□□□□ -0.5
ABCF3-205ENST00000466416 RIPOR2Q9Y4F9 1068 aa11.91□□□□□ -0.5
ABCF3-205ENST00000466416 LAS1LQ9Y4W2 734 aaKnown RBP11.91□□□□□ -0.5
ABCF3-205ENST00000466416 PCDHAC2Q9Y5I4 1007 aa11.91□□□□□ -0.5
ABCF3-205ENST00000466416 CSADQ9Y600 493 aa11.91□□□□□ -0.5
ABCF3-205ENST00000466416 PSMC4P43686 418 aa11.9□□□□□ -0.5
ABCF3-205ENST00000466416 KCNJ4P48050 445 aa11.9□□□□□ -0.5
ABCF3-205ENST00000466416 VGLL4Q14135 290 aa11.9□□□□□ -0.5
ABCF3-205ENST00000466416 DUSP27Q5VZP5 1158 aa11.9□□□□□ -0.5
ABCF3-205ENST00000466416 C17orf99Q6UX52 265 aa11.9□□□□□ -0.5
ABCF3-205ENST00000466416 U2AF1L4Q8WU68 220 aaKnown RBP11.9□□□□□ -0.5
ABCF3-205ENST00000466416 BIN2Q9UBW5 565 aaPredicted RBP11.9□□□□□ -0.5
ABCF3-205ENST00000466416 SPDYE5A6NIY4 337 aa11.89□□□□□ -0.51
ABCF3-205ENST00000466416 BTBD19C9JJ37 291 aa11.89□□□□□ -0.51
ABCF3-205ENST00000466416 F8W031 263 aaPredicted RBP11.89□□□□□ -0.51
ABCF3-205ENST00000466416 SGPL1O95470 568 aa11.89□□□□□ -0.51
ABCF3-205ENST00000466416 DDX58O95786 925 aaKnown RBP11.89□□□□□ -0.51
ABCF3-205ENST00000466416 KLRK1P26718 216 aa11.89□□□□□ -0.51
ABCF3-205ENST00000466416 RBM5P52756 815 aaKnown RBP eCLIP11.89□□□□□ -0.51
ABCF3-205ENST00000466416 SNAPC2Q13487 334 aa11.89□□□□□ -0.51
ABCF3-205ENST00000466416 C15orf52Q6ZUT6 534 aaKnown RBP11.89□□□□□ -0.51
ABCF3-205ENST00000466416 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.89□□□□□ -0.51
ABCF3-205ENST00000466416 MPHOSPH8Q99549 860 aa11.89□□□□□ -0.51
ABCF3-205ENST00000466416 PHAXQ9H814 394 aaKnown RBP11.89□□□□□ -0.51
ABCF3-205ENST00000466416 FMNL1O95466 1100 aaPredicted RBP11.88□□□□□ -0.51
ABCF3-205ENST00000466416 OSBPP22059 807 aa11.88□□□□□ -0.51
ABCF3-205ENST00000466416 SPDYE2Q495Y8 402 aa11.88□□□□□ -0.51
ABCF3-205ENST00000466416 ERO1BQ86YB8 467 aa11.88□□□□□ -0.51
ABCF3-205ENST00000466416 TEPSINQ96N21 525 aa11.88□□□□□ -0.51
ABCF3-205ENST00000466416 GDF15Q99988 308 aa11.88□□□□□ -0.51
ABCF3-205ENST00000466416 MTMR10Q9NXD2 777 aa11.88□□□□□ -0.51
ABCF3-205ENST00000466416 ZNF70Q9UC06 446 aaPredicted RBP11.88□□□□□ -0.51
ABCF3-205ENST00000466416 IL1R1P14778 569 aa11.87□□□□□ -0.51
ABCF3-205ENST00000466416 CTGFP29279 349 aa11.87□□□□□ -0.51
ABCF3-205ENST00000466416 TNNI2P48788 182 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms