RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 RASAL3Q86YV0 1011 aa18.1■□□□□ 0.49
SNRNP40-203ENST00000463988 RIPOR2Q9Y4F9 1068 aa18.1■□□□□ 0.49
SNRNP40-203ENST00000463988 FAM205AQ6ZU69 1335 aa18.09■□□□□ 0.49
SNRNP40-203ENST00000463988 MROH5Q6ZUA9 1318 aa18.09■□□□□ 0.49
SNRNP40-203ENST00000463988 DLGAP5Q15398 846 aa18.09■□□□□ 0.49
SNRNP40-203ENST00000463988 TRMT2AQ8IZ69 625 aaKnown RBP18.09■□□□□ 0.49
SNRNP40-203ENST00000463988 CSRNP1Q96S65 589 aa18.09■□□□□ 0.49
SNRNP40-203ENST00000463988 BICC1Q9H694 974 aaKnown RBP18.09■□□□□ 0.49
SNRNP40-203ENST00000463988 SCAF8Q9UPN6 1271 aaKnown RBP18.09■□□□□ 0.49
SNRNP40-203ENST00000463988 CT47B1P0C2W7 299 aaPredicted RBP18.08■□□□□ 0.48
SNRNP40-203ENST00000463988 PRAMEF18Q5VWM3 479 aa18.08■□□□□ 0.48
SNRNP40-203ENST00000463988 ANKRD44Q8N8A2 993 aa18.08■□□□□ 0.48
SNRNP40-203ENST00000463988 TDRD7Q8NHU6 1098 aaKnown RBP18.08■□□□□ 0.48
SNRNP40-203ENST00000463988 PUS3Q9BZE2 481 aaKnown RBP18.08■□□□□ 0.48
SNRNP40-203ENST00000463988 COL1A1P02452 1464 aaPredicted RBP18.07■□□□□ 0.48
SNRNP40-203ENST00000463988 UBE2Q2LH0YL09 131 aa18.07■□□□□ 0.48
SNRNP40-203ENST00000463988 CCER2I3L3R5 266 aa18.07■□□□□ 0.48
SNRNP40-203ENST00000463988 HIBADHP31937 336 aaKnown RBP18.07■□□□□ 0.48
SNRNP40-203ENST00000463988 MOB2Q70IA6 237 aa18.07■□□□□ 0.48
SNRNP40-203ENST00000463988 USP44Q9H0E7 712 aa18.07■□□□□ 0.48
SNRNP40-203ENST00000463988 RNF186Q9NXI6 227 aa18.07■□□□□ 0.48
SNRNP40-203ENST00000463988 CASP8AP2Q9UKL3 1982 aa18.06■□□□□ 0.48
SNRNP40-203ENST00000463988 TTLL12Q14166 644 aaPredicted RBP18.06■□□□□ 0.48
SNRNP40-203ENST00000463988 CDCA7LQ96GN5 454 aa18.06■□□□□ 0.48
SNRNP40-203ENST00000463988 FAM84BQ96KN1 310 aaPredicted RBP18.06■□□□□ 0.48
SNRNP40-203ENST00000463988 DEFB129Q9H1M3 183 aa18.06■□□□□ 0.48
SNRNP40-203ENST00000463988 PPP2R3BQ9Y5P8 575 aa18.06■□□□□ 0.48
SNRNP40-203ENST00000463988 SPDYE2BA6NHP3 402 aa18.05■□□□□ 0.48
SNRNP40-203ENST00000463988 MYO1BO43795 1136 aa18.05■□□□□ 0.48
SNRNP40-203ENST00000463988 TRPA1O75762 1119 aa18.05■□□□□ 0.48
SNRNP40-203ENST00000463988 SPDYE6P0CI01 402 aa18.05■□□□□ 0.48
SNRNP40-203ENST00000463988 CFAP100Q494V2 611 aa18.05■□□□□ 0.48
SNRNP40-203ENST00000463988 ARMC9Q7Z3E5 817 aa18.05■□□□□ 0.48
SNRNP40-203ENST00000463988 AKAP11Q9UKA4 1901 aa18.04■□□□□ 0.48
SNRNP40-203ENST00000463988 F8W031 263 aaPredicted RBP18.04■□□□□ 0.48
SNRNP40-203ENST00000463988 GYG1P46976 350 aa18.04■□□□□ 0.48
SNRNP40-203ENST00000463988 FBXO33Q7Z6M2 555 aa18.04■□□□□ 0.48
SNRNP40-203ENST00000463988 SMC4Q9NTJ3 1288 aa18.04■□□□□ 0.48
SNRNP40-203ENST00000463988 LRRC24Q50LG9 513 aa18.03■□□□□ 0.48
SNRNP40-203ENST00000463988 METTL24Q5JXM2 366 aa18.03■□□□□ 0.48
SNRNP40-203ENST00000463988 MFSD14BQ5SR56 506 aa18.03■□□□□ 0.48
SNRNP40-203ENST00000463988 LDLRAD1Q5T700 205 aa18.03■□□□□ 0.48
SNRNP40-203ENST00000463988 VGLL2Q8N8G2 317 aa18.03■□□□□ 0.48
SNRNP40-203ENST00000463988 PRMT6Q96LA8 375 aaPredicted RBP18.03■□□□□ 0.48
SNRNP40-203ENST00000463988 MCOLN1Q9GZU1 580 aa18.03■□□□□ 0.48
SNRNP40-203ENST00000463988 SERPINA10Q9UK55 444 aa18.03■□□□□ 0.48
SNRNP40-203ENST00000463988 UNCXA6NJT0 531 aa18.02■□□□□ 0.48
SNRNP40-203ENST00000463988 PDE8BO95263 885 aa18.02■□□□□ 0.48
SNRNP40-203ENST00000463988 PTPN12Q05209 780 aaKnown RBP18.02■□□□□ 0.48
SNRNP40-203ENST00000463988 MAP3K11Q16584 847 aa18.02■□□□□ 0.48
SNRNP40-203ENST00000463988 JAG2Q9Y219 1238 aa18.02■□□□□ 0.48
SNRNP40-203ENST00000463988 KIF16BQ96L93 1317 aa18.01■□□□□ 0.47
SNRNP40-203ENST00000463988 ECM29Q5VYK3 1845 aa18.01■□□□□ 0.47
SNRNP40-203ENST00000463988 TM4SF4P48230 202 aa18.01■□□□□ 0.47
SNRNP40-203ENST00000463988 DGKZQ13574 1117 aa18.01■□□□□ 0.47
SNRNP40-203ENST00000463988 SUPT20HL1Q3ZLR7 823 aa18.01■□□□□ 0.47
SNRNP40-203ENST00000463988 CAVIN4Q5BKX8 364 aa18.01■□□□□ 0.47
SNRNP40-203ENST00000463988 VPS37DQ86XT2 251 aa18.01■□□□□ 0.47
SNRNP40-203ENST00000463988 TTF2Q9UNY4 1162 aaKnown RBP18.01■□□□□ 0.47
SNRNP40-203ENST00000463988 PCDHAC2Q9Y5I4 1007 aa18.01■□□□□ 0.47
SNRNP40-203ENST00000463988 PPP1R12BO60237 982 aaPredicted RBP18■□□□□ 0.47
SNRNP40-203ENST00000463988 RBM5P52756 815 aaKnown RBP eCLIP18■□□□□ 0.47
SNRNP40-203ENST00000463988 TBC1D22AQ8WUA7 517 aa18■□□□□ 0.47
SNRNP40-203ENST00000463988 ANGEL1Q9UNK9 670 aaKnown RBP18■□□□□ 0.47
SNRNP40-203ENST00000463988 CLRN2A0PK11 232 aa17.99■□□□□ 0.47
SNRNP40-203ENST00000463988 RFX5P48382 616 aaPredicted RBP17.99■□□□□ 0.47
SNRNP40-203ENST00000463988 TNFAIP1Q13829 316 aa17.99■□□□□ 0.47
SNRNP40-203ENST00000463988 PRKG1Q13976 671 aa17.99■□□□□ 0.47
SNRNP40-203ENST00000463988 PUM3Q15397 648 aaKnown RBP17.99■□□□□ 0.47
SNRNP40-203ENST00000463988 SPDYE2Q495Y8 402 aa17.99■□□□□ 0.47
SNRNP40-203ENST00000463988 KLHDC4Q8TBB5 520 aa17.99■□□□□ 0.47
SNRNP40-203ENST00000463988 API5Q9BZZ5 524 aaKnown RBP17.99■□□□□ 0.47
SNRNP40-203ENST00000463988 HDAC5Q9UQL6 1122 aa17.99■□□□□ 0.47
SNRNP40-203ENST00000463988 CCDC85CA6NKD9 419 aa17.98■□□□□ 0.47
SNRNP40-203ENST00000463988 EYA2O00167 538 aa17.98■□□□□ 0.47
SNRNP40-203ENST00000463988 FGFR2P21802 821 aa17.98■□□□□ 0.47
SNRNP40-203ENST00000463988 HDLBPQ00341 1268 aaKnown RBP17.98■□□□□ 0.47
SNRNP40-203ENST00000463988 SREBF2Q12772 1141 aa17.98■□□□□ 0.47
SNRNP40-203ENST00000463988 VEZTQ9HBM0 779 aa17.98■□□□□ 0.47
SNRNP40-203ENST00000463988 FBXO3Q9UK99 471 aa17.98■□□□□ 0.47
SNRNP40-203ENST00000463988 NOB1Q9ULX3 412 aaKnown RBP17.98■□□□□ 0.47
SNRNP40-203ENST00000463988 AOX1Q06278 1338 aa17.98■□□□□ 0.47
SNRNP40-203ENST00000463988 SSC5DA1L4H1 1573 aa17.97■□□□□ 0.47
SNRNP40-203ENST00000463988 FRAT2O75474 233 aaPredicted RBP17.97■□□□□ 0.47
SNRNP40-203ENST00000463988 IFIT1P09914 478 aaKnown RBP17.97■□□□□ 0.47
SNRNP40-203ENST00000463988 UBTFL1P0CB47 393 aaPredicted RBP17.97■□□□□ 0.47
SNRNP40-203ENST00000463988 RASA3Q14644 834 aa17.97■□□□□ 0.47
SNRNP40-203ENST00000463988 NOM1Q5C9Z4 860 aaKnown RBP17.97■□□□□ 0.47
SNRNP40-203ENST00000463988 SPRYD7Q5W111 196 aa17.97■□□□□ 0.47
SNRNP40-203ENST00000463988 DZIP1LQ8IYY4 767 aaKnown RBP17.97■□□□□ 0.47
SNRNP40-203ENST00000463988 SLC10A4Q96EP9 437 aa17.97■□□□□ 0.47
SNRNP40-203ENST00000463988 MRIQ9BWK5 157 aa17.97■□□□□ 0.47
SNRNP40-203ENST00000463988 ZNF70Q9UC06 446 aaPredicted RBP17.97■□□□□ 0.47
SNRNP40-203ENST00000463988 ARAP2Q8WZ64 1704 aa17.97■□□□□ 0.47
SNRNP40-203ENST00000463988 CRKP46108 304 aa17.96■□□□□ 0.47
SNRNP40-203ENST00000463988 RGS19P49795 217 aa17.96■□□□□ 0.47
SNRNP40-203ENST00000463988 BCAMP50895 628 aa17.96■□□□□ 0.47
SNRNP40-203ENST00000463988 INHBEP58166 350 aa17.96■□□□□ 0.47
SNRNP40-203ENST00000463988 NBPF12Q5TAG4 269 aaPredicted RBP17.96■□□□□ 0.47
SNRNP40-203ENST00000463988 LPIN2Q92539 896 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms