RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 NBPF7P0C2Y1 421 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC3-205ENST00000462715 UBTFL1P0CB47 393 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC3-205ENST00000462715 ALDH1B1P30837 517 aa13.52□□□□□ -0.25
TRAPPC3-205ENST00000462715 BMS1Q14692 1282 aaKnown RBP13.52□□□□□ -0.25
TRAPPC3-205ENST00000462715 KCNF1Q9H3M0 494 aa13.52□□□□□ -0.25
TRAPPC3-205ENST00000462715 KCNA3P22001 575 aa13.51□□□□□ -0.25
TRAPPC3-205ENST00000462715 HOXA10P31260 410 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC3-205ENST00000462715 CASC1Q6TDU7 716 aa13.51□□□□□ -0.25
TRAPPC3-205ENST00000462715 C3orf67Q6ZVT6 689 aa13.51□□□□□ -0.25
TRAPPC3-205ENST00000462715 DDX46Q7L014 1031 aaKnown RBP13.51□□□□□ -0.25
TRAPPC3-205ENST00000462715 MYH3P11055 1940 aa13.51□□□□□ -0.25
TRAPPC3-205ENST00000462715 DALRD3Q5D0E6 543 aaKnown RBP13.51□□□□□ -0.25
TRAPPC3-205ENST00000462715 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC3-205ENST00000462715 TTLL6Q8N841 843 aa13.51□□□□□ -0.25
TRAPPC3-205ENST00000462715 RASSF4Q9H2L5 321 aa13.51□□□□□ -0.25
TRAPPC3-205ENST00000462715 PYCARDQ9ULZ3 195 aa13.51□□□□□ -0.25
TRAPPC3-205ENST00000462715 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC3-205ENST00000462715 PSEN1P49768 467 aa13.5□□□□□ -0.25
TRAPPC3-205ENST00000462715 TEX35Q5T0J7 233 aa13.5□□□□□ -0.25
TRAPPC3-205ENST00000462715 ERO1AQ96HE7 468 aa13.5□□□□□ -0.25
TRAPPC3-205ENST00000462715 CRAMP1Q96RY5 1269 aa13.5□□□□□ -0.25
TRAPPC3-205ENST00000462715 NOL10Q9BSC4 688 aaKnown RBP13.5□□□□□ -0.25
TRAPPC3-205ENST00000462715 TNNT3P45378 269 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC3-205ENST00000462715 NOP2P46087 812 aaKnown RBP13.5□□□□□ -0.25
TRAPPC3-205ENST00000462715 SUCLG2Q96I99 432 aa13.5□□□□□ -0.25
TRAPPC3-205ENST00000462715 MEIS3Q99687 375 aa13.5□□□□□ -0.25
TRAPPC3-205ENST00000462715 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
TRAPPC3-205ENST00000462715 TTLL11Q8NHH1 800 aa13.49□□□□□ -0.25
TRAPPC3-205ENST00000462715 IL17RAQ96F46 866 aa13.49□□□□□ -0.25
TRAPPC3-205ENST00000462715 FUCA2Q9BTY2 467 aa13.49□□□□□ -0.25
TRAPPC3-205ENST00000462715 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC3-205ENST00000462715 RTL9Q8NET4 1388 aa13.49□□□□□ -0.25
TRAPPC3-205ENST00000462715 BRCA1P38398 1863 aaKnown RBP13.49□□□□□ -0.25
TRAPPC3-205ENST00000462715 HNRNPH2P55795 449 aaKnown RBP13.49□□□□□ -0.25
TRAPPC3-205ENST00000462715 RAD51AP2Q09MP3 1159 aa13.49□□□□□ -0.25
TRAPPC3-205ENST00000462715 ANKRD45Q5TZF3 282 aa13.49□□□□□ -0.25
TRAPPC3-205ENST00000462715 C17orf53Q8N3J3 647 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC3-205ENST00000462715 BCS1LQ9Y276 419 aa13.49□□□□□ -0.25
TRAPPC3-205ENST00000462715 ATP8B1O43520 1251 aa13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 CSF1RP07333 972 aa13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 FOXO4P98177 505 aa13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 PRPF40BQ6NWY9 871 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 ZGPATQ8N5A5 531 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 GOLGB1Q14789 3259 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 CCDC171Q6TFL3 1326 aa13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 WDR33Q9C0J8 1336 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 KIF2AO00139 706 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 GNAI2P04899 355 aa13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 GRAPQ13588 217 aa13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 LMBR1LQ6UX01 489 aa13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 GRAPLQ8TC17 118 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 CCDC85AQ96PX6 553 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 CDC5LQ99459 802 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 BICC1Q9H694 974 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 CWC15Q9P013 229 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 CHMP3Q9Y3E7 222 aa13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 V9GYY5 206 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC3-205ENST00000462715 NEMFO60524 1076 aa13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 BBOX1O75936 387 aa13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 TNNT1P13805 278 aa13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 GPR162Q16538 588 aa13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 TMX4Q9H1E5 349 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 WWC3Q9ULE0 1092 aa13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 ZBTB7BO15156 539 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 UBE2HP62256 183 aa13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 RABL6Q3YEC7 729 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 EPHA10Q5JZY3 1008 aa13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 TMC4Q7Z404 712 aa13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 KAZALD1Q96I82 304 aa13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 MYCBPQ99417 103 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 GREM2Q9H772 168 aa13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 KCND1Q9NSA2 647 aa13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 LRRFIP2Q9Y608 721 aaKnown RBP13.47□□□□□ -0.25
TRAPPC3-205ENST00000462715 PPEF1O14829 653 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC3-205ENST00000462715 TPM4P67936 248 aa13.46□□□□□ -0.25
TRAPPC3-205ENST00000462715 IFIT5Q13325 482 aaKnown RBP13.46□□□□□ -0.25
TRAPPC3-205ENST00000462715 CCDC57Q2TAC2 916 aa13.46□□□□□ -0.25
TRAPPC3-205ENST00000462715 KMT5BQ4FZB7 885 aa13.46□□□□□ -0.25
TRAPPC3-205ENST00000462715 TTC22Q5TAA0 569 aa13.46□□□□□ -0.25
TRAPPC3-205ENST00000462715 SOGA3Q5TF21 947 aa13.46□□□□□ -0.25
TRAPPC3-205ENST00000462715 ICE2Q659A1 982 aa13.46□□□□□ -0.25
TRAPPC3-205ENST00000462715 ANKRD18BA2A2Z9 1011 aa13.45□□□□□ -0.26
TRAPPC3-205ENST00000462715 TUBB4AP04350 444 aa13.45□□□□□ -0.26
TRAPPC3-205ENST00000462715 ITGA6P23229 1130 aa13.45□□□□□ -0.26
TRAPPC3-205ENST00000462715 NCAPGQ9BPX3 1015 aa13.45□□□□□ -0.26
TRAPPC3-205ENST00000462715 CACNA1SQ13698 1873 aa13.45□□□□□ -0.26
TRAPPC3-205ENST00000462715 EPB41L2O43491 1005 aaKnown RBP13.45□□□□□ -0.26
TRAPPC3-205ENST00000462715 ANAPC15P60006 121 aa13.45□□□□□ -0.26
TRAPPC3-205ENST00000462715 RPS8P62241 208 aaKnown RBP13.45□□□□□ -0.26
TRAPPC3-205ENST00000462715 ANKRD18AQ8IVF6 992 aa13.45□□□□□ -0.26
TRAPPC3-205ENST00000462715 GOLGA6L1Q8N7Z2 621 aa13.45□□□□□ -0.26
TRAPPC3-205ENST00000462715 ANKRD44Q8N8A2 993 aa13.45□□□□□ -0.26
TRAPPC3-205ENST00000462715 SEC31BQ9NQW1 1179 aa13.45□□□□□ -0.26
TRAPPC3-205ENST00000462715 ARFGEF1Q9Y6D6 1849 aa13.45□□□□□ -0.26
TRAPPC3-205ENST00000462715 GRIN3BO60391 1043 aa13.44□□□□□ -0.26
TRAPPC3-205ENST00000462715 CASQ1P31415 396 aa13.44□□□□□ -0.26
TRAPPC3-205ENST00000462715 IGHMBP2P38935 993 aaKnown RBP13.44□□□□□ -0.26
TRAPPC3-205ENST00000462715 GTF2A1P52655 376 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC3-205ENST00000462715 GPS2Q13227 327 aa13.44□□□□□ -0.26
TRAPPC3-205ENST00000462715 CC2D2BQ6DHV5 1058 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms