RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 GPC2Q8N158 579 aa13.84□□□□□ -0.19
SSBP1-202ENST00000461433 OTUD7AQ8TE49 926 aaPredicted RBP13.84□□□□□ -0.19
SSBP1-202ENST00000461433 ZNF512BQ96KM6 892 aaPredicted RBP13.84□□□□□ -0.19
SSBP1-202ENST00000461433 MXD3Q9BW11 206 aa13.84□□□□□ -0.19
SSBP1-202ENST00000461433 SALL3Q9BXA9 1300 aa13.84□□□□□ -0.19
SSBP1-202ENST00000461433 TNIP1Q15025 636 aa13.83□□□□□ -0.2
SSBP1-202ENST00000461433 GNL3LQ9NVN8 582 aaKnown RBP13.83□□□□□ -0.2
SSBP1-202ENST00000461433 JAG2Q9Y219 1238 aa13.83□□□□□ -0.2
SSBP1-202ENST00000461433 WDR90Q96KV7 1748 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 SEMA3EO15041 775 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 YY1P25490 414 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 MCAMP43121 646 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 CCDC158Q5M9N0 1113 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 DPY19L2Q6NUT2 758 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 CHD1LQ86WJ1 897 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 CERS5Q8N5B7 392 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 GMLQ99445 158 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 PPP4R2Q9NY27 417 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 HMG20BQ9P0W2 317 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
SSBP1-202ENST00000461433 GJA3Q9Y6H8 435 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 POTECB2RU33 542 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 UQCRFS1P1P0C7P4 283 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 TTC39AQ5SRH9 613 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 RSBN1LQ6PCB5 846 aaPredicted RBP13.82□□□□□ -0.2
SSBP1-202ENST00000461433 PI16Q6UXB8 463 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 CCDC136Q96JN2 1154 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 LNPKQ9C0E8 428 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 DENND2AQ9ULE3 1009 aa13.82□□□□□ -0.2
SSBP1-202ENST00000461433 FRAT2O75474 233 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-202ENST00000461433 SCNN1DP51172 638 aa13.81□□□□□ -0.2
SSBP1-202ENST00000461433 FKBP1AP62942 108 aaKnown RBP13.81□□□□□ -0.2
SSBP1-202ENST00000461433 CHAF1AQ13111 956 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-202ENST00000461433 SPATA5Q8NB90 893 aa13.81□□□□□ -0.2
SSBP1-202ENST00000461433 FBXW7Q969H0 707 aa13.81□□□□□ -0.2
SSBP1-202ENST00000461433 L3MBTL3Q96JM7 780 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-202ENST00000461433 PDS5AQ29RF7 1337 aaKnown RBP13.81□□□□□ -0.2
SSBP1-202ENST00000461433 MYO5AQ9Y4I1 1855 aaKnown RBP13.8□□□□□ -0.2
SSBP1-202ENST00000461433 GMPSP49915 693 aaPredicted RBP13.8□□□□□ -0.2
SSBP1-202ENST00000461433 GRIK5Q16478 980 aa13.8□□□□□ -0.2
SSBP1-202ENST00000461433 CENPQQ7L2Z9 268 aaPredicted RBP13.8□□□□□ -0.2
SSBP1-202ENST00000461433 SCN4AP35499 1836 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 SHTN1A0MZ66 631 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 ATP5JP18859 108 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 MFSD14BQ5SR56 506 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 AGBL3Q8NEM8 1001 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 DPF2Q92785 391 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 SNRKQ9NRH2 765 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 ECHDC1Q9NTX5 307 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 NDUFB9Q9Y6M9 179 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 SALL1Q9NSC2 1324 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 RPS12P25398 132 aaKnown RBP13.79□□□□□ -0.2
SSBP1-202ENST00000461433 PDE4AP27815 886 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 ZAP70P43403 619 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 TSHZ3Q63HK5 1081 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 WDR66Q8TBY9 1149 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.79□□□□□ -0.2
SSBP1-202ENST00000461433 GPRC5DQ9NZD1 345 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 ZBTB47Q9UFB7 747 aaPredicted RBP13.79□□□□□ -0.2
SSBP1-202ENST00000461433 STAP2Q9UGK3 403 aa13.79□□□□□ -0.2
SSBP1-202ENST00000461433 TTC41PQ6P2S7 1318 aa13.78□□□□□ -0.2
SSBP1-202ENST00000461433 MYO3BQ8WXR4 1341 aa13.78□□□□□ -0.2
SSBP1-202ENST00000461433 CYP2E1P05181 493 aaPredicted RBP13.78□□□□□ -0.2
SSBP1-202ENST00000461433 MX1P20591 662 aa13.78□□□□□ -0.2
SSBP1-202ENST00000461433 EPS15P42566 896 aa13.78□□□□□ -0.2
SSBP1-202ENST00000461433 TBC1D9Q6ZT07 1266 aa13.78□□□□□ -0.2
SSBP1-202ENST00000461433 PI4K2BQ8TCG2 481 aa13.78□□□□□ -0.2
SSBP1-202ENST00000461433 ZNF526Q8TF50 670 aaPredicted RBP13.78□□□□□ -0.2
SSBP1-202ENST00000461433 TBC1D22AQ8WUA7 517 aa13.78□□□□□ -0.2
SSBP1-202ENST00000461433 PDE1AP54750 535 aa13.77□□□□□ -0.21
SSBP1-202ENST00000461433 KIAA0825Q8IV33 1275 aa13.77□□□□□ -0.21
SSBP1-202ENST00000461433 PLEKHM2Q8IWE5 1019 aa13.77□□□□□ -0.21
SSBP1-202ENST00000461433 BOLA2Q9H3K6 86 aa13.77□□□□□ -0.21
SSBP1-202ENST00000461433 RRAGCQ9HB90 399 aa13.77□□□□□ -0.21
SSBP1-202ENST00000461433 NMRK2Q9NPI5 230 aa13.77□□□□□ -0.21
SSBP1-202ENST00000461433 CNOT7Q9UIV1 285 aaKnown RBP13.77□□□□□ -0.21
SSBP1-202ENST00000461433 DOCK2Q92608 1830 aa13.77□□□□□ -0.21
SSBP1-202ENST00000461433 PRDX5P30044 214 aa13.76□□□□□ -0.21
SSBP1-202ENST00000461433 ZNF280AP59817 542 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-202ENST00000461433 MICALL2Q8IY33 904 aa13.76□□□□□ -0.21
SSBP1-202ENST00000461433 HAUS7Q99871 368 aa13.76□□□□□ -0.21
SSBP1-202ENST00000461433 ANTXR1Q9H6X2 564 aa13.76□□□□□ -0.21
SSBP1-202ENST00000461433 ADAMTSL1Q8N6G6 1762 aa13.76□□□□□ -0.21
SSBP1-202ENST00000461433 EGFRP00533 1210 aa13.75□□□□□ -0.21
SSBP1-202ENST00000461433 USP17L8P0C7I0 530 aa13.75□□□□□ -0.21
SSBP1-202ENST00000461433 ZNF384Q8TF68 577 aa13.75□□□□□ -0.21
SSBP1-202ENST00000461433 EDC3Q96F86 508 aaKnown RBP13.75□□□□□ -0.21
SSBP1-202ENST00000461433 GPATCH3Q96I76 525 aa13.75□□□□□ -0.21
SSBP1-202ENST00000461433 OSBPL3Q9H4L5 887 aa13.75□□□□□ -0.21
SSBP1-202ENST00000461433 PIH1D3Q9NQM4 214 aaKnown RBP13.75□□□□□ -0.21
SSBP1-202ENST00000461433 SUGT1Q9Y2Z0 365 aa13.75□□□□□ -0.21
SSBP1-202ENST00000461433 F8W031 263 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-202ENST00000461433 SKAP1Q86WV1 359 aa13.75□□□□□ -0.21
SSBP1-202ENST00000461433 ZNF784Q8NCA9 323 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-202ENST00000461433 TAF1DQ9H5J8 278 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-202ENST00000461433 ABCF2Q9UG63 623 aa13.75□□□□□ -0.21
SSBP1-202ENST00000461433 HACL1Q9UJ83 578 aa13.75□□□□□ -0.21
SSBP1-202ENST00000461433 TTF2Q9UNY4 1162 aaKnown RBP13.75□□□□□ -0.21
SSBP1-202ENST00000461433 VEGFAP15692 232 aaPredicted RBP13.74□□□□□ -0.21
SSBP1-202ENST00000461433 SAMD7Q7Z3H4 446 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms