RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 MUC3BQ9H195 1237 aa7.04□□□□□ -1.28
LINC00393-202ENST00000452852 SH2B1Q9NRF2 756 aaPredicted RBP7.04□□□□□ -1.28
LINC00393-202ENST00000452852 DCTN4Q9UJW0 460 aa7.04□□□□□ -1.28
LINC00393-202ENST00000452852 NEFLP07196 543 aa7.03□□□□□ -1.28
LINC00393-202ENST00000452852 EPHA1P21709 976 aa7.03□□□□□ -1.28
LINC00393-202ENST00000452852 PEAR1Q5VY43 1037 aaPredicted RBP7.03□□□□□ -1.28
LINC00393-202ENST00000452852 TMEM102Q8N9M5 508 aaPredicted RBP7.03□□□□□ -1.28
LINC00393-202ENST00000452852 NXPE3Q969Y0 559 aa7.03□□□□□ -1.28
LINC00393-202ENST00000452852 NIF3L1Q9GZT8 377 aa7.03□□□□□ -1.28
LINC00393-202ENST00000452852 DLL1O00548 723 aa7.02□□□□□ -1.29
LINC00393-202ENST00000452852 YBX3P16989 372 aaKnown RBP eCLIP7.02□□□□□ -1.29
LINC00393-202ENST00000452852 ADGRE1Q14246 886 aa7.02□□□□□ -1.29
LINC00393-202ENST00000452852 MBTPS1Q14703 1052 aa7.02□□□□□ -1.29
LINC00393-202ENST00000452852 FOXD4L6Q3SYB3 417 aaPredicted RBP7.02□□□□□ -1.29
LINC00393-202ENST00000452852 IGF2-ASQ6U949 168 aa7.02□□□□□ -1.29
LINC00393-202ENST00000452852 FOXD4L3Q6VB84 417 aaPredicted RBP7.02□□□□□ -1.29
LINC00393-202ENST00000452852 TMC7Q7Z402 723 aa7.02□□□□□ -1.29
LINC00393-202ENST00000452852 GALNT12Q8IXK2 581 aa7.02□□□□□ -1.29
LINC00393-202ENST00000452852 SRA1Q9HD15 236 aaKnown RBP7.02□□□□□ -1.29
LINC00393-202ENST00000452852 USP21Q9UK80 565 aa7.02□□□□□ -1.29
LINC00393-202ENST00000452852 BAZ1BQ9UIG0 1483 aaKnown RBP7.02□□□□□ -1.29
LINC00393-202ENST00000452852 CUX2O14529 1486 aa7.01□□□□□ -1.29
LINC00393-202ENST00000452852 FAM177BA6PVY3 158 aa7.01□□□□□ -1.29
LINC00393-202ENST00000452852 EIF1AYO14602 144 aaKnown RBP7.01□□□□□ -1.29
LINC00393-202ENST00000452852 CPNE3O75131 537 aaKnown RBP7.01□□□□□ -1.29
LINC00393-202ENST00000452852 MAPK1P28482 360 aa7.01□□□□□ -1.29
LINC00393-202ENST00000452852 NRG1Q02297 640 aaPredicted RBP7.01□□□□□ -1.29
LINC00393-202ENST00000452852 MAP4K3Q8IVH8 894 aa7.01□□□□□ -1.29
LINC00393-202ENST00000452852 GALNT11Q8NCW6 608 aa7.01□□□□□ -1.29
LINC00393-202ENST00000452852 DMRTB1Q96MA1 342 aa7.01□□□□□ -1.29
LINC00393-202ENST00000452852 A0A1W2PP55 124 aa7□□□□□ -1.29
LINC00393-202ENST00000452852 TXKP42681 527 aa7□□□□□ -1.29
LINC00393-202ENST00000452852 ALKBH8Q96BT7 664 aaKnown RBP7□□□□□ -1.29
LINC00393-202ENST00000452852 CARD10Q9BWT7 1032 aa7□□□□□ -1.29
LINC00393-202ENST00000452852 SOX13Q9UN79 622 aa7□□□□□ -1.29
LINC00393-202ENST00000452852 H3BRJ5 948 aa6.99□□□□□ -1.29
LINC00393-202ENST00000452852 FSCN2O14926 492 aa6.99□□□□□ -1.29
LINC00393-202ENST00000452852 CABP4P57796 275 aa6.99□□□□□ -1.29
LINC00393-202ENST00000452852 FAM117BQ6P1L5 589 aa6.99□□□□□ -1.29
LINC00393-202ENST00000452852 TXNRD3Q86VQ6 643 aa6.99□□□□□ -1.29
LINC00393-202ENST00000452852 ASAP3Q8TDY4 903 aa6.99□□□□□ -1.29
LINC00393-202ENST00000452852 BSNDQ8WZ55 320 aa6.99□□□□□ -1.29
LINC00393-202ENST00000452852 CSRNP1Q96S65 589 aa6.99□□□□□ -1.29
LINC00393-202ENST00000452852 BHLHE41Q9C0J9 482 aaPredicted RBP6.99□□□□□ -1.29
LINC00393-202ENST00000452852 DNAJC25Q9H1X3 360 aa6.99□□□□□ -1.29
LINC00393-202ENST00000452852 PEG3Q9GZU2 1588 aa6.99□□□□□ -1.29
LINC00393-202ENST00000452852 METTL12A8MUP2 240 aa6.98□□□□□ -1.29
LINC00393-202ENST00000452852 TM4SF5O14894 197 aa6.98□□□□□ -1.29
LINC00393-202ENST00000452852 IGSF3O75054 1194 aa6.98□□□□□ -1.29
LINC00393-202ENST00000452852 CD68P34810 354 aaPredicted RBP6.98□□□□□ -1.29
LINC00393-202ENST00000452852 IREB2P48200 963 aaKnown RBP6.98□□□□□ -1.29
LINC00393-202ENST00000452852 RSPO4Q2I0M5 234 aaPredicted RBP6.98□□□□□ -1.29
LINC00393-202ENST00000452852 VN1R5Q7Z5H4 357 aa6.98□□□□□ -1.29
LINC00393-202ENST00000452852 WFDC12Q8WWY7 111 aa6.98□□□□□ -1.29
LINC00393-202ENST00000452852 CCDC74AQ96AQ1 378 aa6.98□□□□□ -1.29
LINC00393-202ENST00000452852 LIN7BQ9HAP6 207 aa6.98□□□□□ -1.29
LINC00393-202ENST00000452852 NPHS2Q9NP85 383 aa6.98□□□□□ -1.29
LINC00393-202ENST00000452852 KCNK4Q9NYG8 393 aa6.98□□□□□ -1.29
LINC00393-202ENST00000452852 LOC105371045A0A1W2PR82 267 aa6.97□□□□□ -1.29
LINC00393-202ENST00000452852 PAX4O43316 350 aa6.97□□□□□ -1.29
LINC00393-202ENST00000452852 NOS3P29474 1203 aa6.97□□□□□ -1.29
LINC00393-202ENST00000452852 PIP4K2BP78356 416 aa6.97□□□□□ -1.29
LINC00393-202ENST00000452852 LRP8Q14114 963 aa6.97□□□□□ -1.29
LINC00393-202ENST00000452852 DSC3Q14574 896 aa6.97□□□□□ -1.29
LINC00393-202ENST00000452852 KIAA0319Q5VV43 1072 aa6.97□□□□□ -1.29
LINC00393-202ENST00000452852 KLHL23Q8NBE8 558 aa6.97□□□□□ -1.29
LINC00393-202ENST00000452852 DCAF11Q8TEB1 546 aa6.97□□□□□ -1.29
LINC00393-202ENST00000452852 SLC7A3Q8WY07 619 aa6.97□□□□□ -1.29
LINC00393-202ENST00000452852 KLHDC7BQ96G42 594 aa6.97□□□□□ -1.29
LINC00393-202ENST00000452852 TCF12Q99081 682 aa6.97□□□□□ -1.29
LINC00393-202ENST00000452852 MRPL18Q9H0U6 180 aaKnown RBP6.97□□□□□ -1.29
LINC00393-202ENST00000452852 SEC31BQ9NQW1 1179 aa6.97□□□□□ -1.29
LINC00393-202ENST00000452852 TPSG1Q9NRR2 321 aa6.97□□□□□ -1.29
LINC00393-202ENST00000452852 LAMC3Q9Y6N6 1575 aa6.96□□□□□ -1.29
LINC00393-202ENST00000452852 UNCXA6NJT0 531 aa6.96□□□□□ -1.3
LINC00393-202ENST00000452852 DDX3YO15523 660 aaKnown RBP6.96□□□□□ -1.3
LINC00393-202ENST00000452852 TREHO43280 583 aa6.96□□□□□ -1.3
LINC00393-202ENST00000452852 ALX3O95076 343 aa6.96□□□□□ -1.3
LINC00393-202ENST00000452852 PLCB3Q01970 1234 aa6.96□□□□□ -1.3
LINC00393-202ENST00000452852 HGSNATQ68CP4 663 aa6.96□□□□□ -1.3
LINC00393-202ENST00000452852 CCNJLQ8IV13 435 aa6.96□□□□□ -1.3
LINC00393-202ENST00000452852 WNT8BQ93098 351 aa6.96□□□□□ -1.3
LINC00393-202ENST00000452852 NESP48681 1621 aa6.95□□□□□ -1.3
LINC00393-202ENST00000452852 A0A096LPE4 126 aa6.95□□□□□ -1.3
LINC00393-202ENST00000452852 A0A1W2PPZ6 126 aa6.95□□□□□ -1.3
LINC00393-202ENST00000452852 F8W735 103 aaPredicted RBP6.95□□□□□ -1.3
LINC00393-202ENST00000452852 SOX1O00570 391 aaPredicted RBP6.95□□□□□ -1.3
LINC00393-202ENST00000452852 ADAM11O75078 769 aa6.95□□□□□ -1.3
LINC00393-202ENST00000452852 WISP1O95388 367 aa6.95□□□□□ -1.3
LINC00393-202ENST00000452852 GRIA4P48058 902 aa6.95□□□□□ -1.3
LINC00393-202ENST00000452852 IKBKEQ14164 716 aa6.95□□□□□ -1.3
LINC00393-202ENST00000452852 SPRED3Q2MJR0 410 aa6.95□□□□□ -1.3
LINC00393-202ENST00000452852 TMEM130Q8N3G9 435 aa6.95□□□□□ -1.3
LINC00393-202ENST00000452852 EPS8L3Q8TE67 593 aaKnown RBP6.95□□□□□ -1.3
LINC00393-202ENST00000452852 EHD4Q9H223 541 aa6.95□□□□□ -1.3
LINC00393-202ENST00000452852 AKTIPQ9H8T0 292 aa6.95□□□□□ -1.3
LINC00393-202ENST00000452852 OSGEPQ9NPF4 335 aa6.95□□□□□ -1.3
LINC00393-202ENST00000452852 MROH2BQ7Z745 1585 aa6.95□□□□□ -1.3
LINC00393-202ENST00000452852 KIF21AQ7Z4S6 1674 aa6.94□□□□□ -1.3
LINC00393-202ENST00000452852 DYRK3O43781 588 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms