RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 RABL6Q3YEC7 729 aaPredicted RBP15.64■□□□□ 0.09
SYNGAP1-204ENST00000449372 ANO6Q4KMQ2 910 aa15.64■□□□□ 0.09
SYNGAP1-204ENST00000449372 LRRN4CLQ8ND94 238 aa15.64■□□□□ 0.09
SYNGAP1-204ENST00000449372 RFX5P48382 616 aaPredicted RBP15.63■□□□□ 0.09
SYNGAP1-204ENST00000449372 ARID5BQ14865 1188 aa15.63■□□□□ 0.09
SYNGAP1-204ENST00000449372 SUFUQ9UMX1 484 aa15.63■□□□□ 0.09
SYNGAP1-204ENST00000449372 ACTN2P35609 894 aa15.63■□□□□ 0.09
SYNGAP1-204ENST00000449372 SMC1AQ14683 1233 aaKnown RBP15.63■□□□□ 0.09
SYNGAP1-204ENST00000449372 REXO1L1PQ8IX06 675 aa15.63■□□□□ 0.09
SYNGAP1-204ENST00000449372 MYD88Q99836 296 aa15.63■□□□□ 0.09
SYNGAP1-204ENST00000449372 CHMP3Q9Y3E7 222 aa15.63■□□□□ 0.09
SYNGAP1-204ENST00000449372 ELP1O95163 1332 aa15.63■□□□□ 0.09
SYNGAP1-204ENST00000449372 SYT1P21579 422 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 LEKR1Q6ZMV7 388 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 CCAR2Q8N163 923 aaKnown RBP15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 PLBD2Q8NHP8 589 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 UBXN4Q92575 508 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 L2HGDHQ9H9P8 463 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 GOLGA6L19H0YKK7 550 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 SEC31AO94979 1220 aaKnown RBP15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 ZRSR1Q15695 479 aaKnown RBP15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 EGFL6Q8IUX8 553 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 UBXN6Q9BZV1 441 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 PPM1EQ8WY54 764 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 EXOC4Q96A65 974 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 ADAM21Q9UKJ8 722 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 PALD1Q9ULE6 856 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 KIF1CO43896 1103 aaKnown RBP15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 IVLP07476 585 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 TDO2P48775 406 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 KRT32Q14532 448 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 IQUBQ8NA54 791 aa15.62■□□□□ 0.09
SYNGAP1-204ENST00000449372 LARP1BQ659C4 914 aaKnown RBP15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 TMED8Q6PL24 325 aaPredicted RBP15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 MNS1Q8NEH6 495 aa15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 EVI5LQ96CN4 794 aa15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 ATP8B1O43520 1251 aa15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 GSCP56915 257 aaPredicted RBP15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 CKAP2LQ8IYA6 745 aa15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 JAKMIP1Q96N16 626 aaKnown RBP15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 TNMDQ9H2S6 317 aa15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 SNX14Q9Y5W7 946 aa15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 EIF3CLB5ME19 914 aaKnown RBP15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 AK2P54819 239 aa15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 DNAJC21Q5F1R6 531 aaKnown RBP15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 CCDC34Q96HJ3 373 aa15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 EIF3CQ99613 913 aaKnown RBP15.61■□□□□ 0.09
SYNGAP1-204ENST00000449372 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.61■□□□□ 0.091e-6■■■■□ 24.9
SYNGAP1-204ENST00000449372 DNM1Q05193 864 aaKnown RBP15.6■□□□□ 0.09
SYNGAP1-204ENST00000449372 SNW1Q13573 536 aaKnown RBP15.6■□□□□ 0.09
SYNGAP1-204ENST00000449372 PSD3Q9NYI0 1048 aa15.6■□□□□ 0.09
SYNGAP1-204ENST00000449372 GJB2P29033 226 aa15.6■□□□□ 0.09
SYNGAP1-204ENST00000449372 NEXNQ0ZGT2 675 aa15.6■□□□□ 0.09
SYNGAP1-204ENST00000449372 MCTP2Q6DN12 878 aa15.6■□□□□ 0.09
SYNGAP1-204ENST00000449372 ECHDC1Q9NTX5 307 aa15.6■□□□□ 0.09
SYNGAP1-204ENST00000449372 ORC3Q9UBD5 711 aaPredicted RBP15.6■□□□□ 0.09
SYNGAP1-204ENST00000449372 SWT1Q5T5J6 900 aaKnown RBP15.6■□□□□ 0.09
SYNGAP1-204ENST00000449372 GORABQ5T7V8 394 aa15.6■□□□□ 0.09
SYNGAP1-204ENST00000449372 STRN4Q9NRL3 753 aa15.6■□□□□ 0.09
SYNGAP1-204ENST00000449372 SUGP1Q8IWZ8 645 aaKnown RBP15.59■□□□□ 0.09
SYNGAP1-204ENST00000449372 TDRD7Q8NHU6 1098 aaKnown RBP15.59■□□□□ 0.09
SYNGAP1-204ENST00000449372 COPRSQ9NQ92 184 aa15.59■□□□□ 0.09
SYNGAP1-204ENST00000449372 HMG20BQ9P0W2 317 aa15.59■□□□□ 0.09
SYNGAP1-204ENST00000449372 CTAGE5O15320 804 aa15.59■□□□□ 0.09
SYNGAP1-204ENST00000449372 MAP2K2P36507 400 aa15.59■□□□□ 0.09
SYNGAP1-204ENST00000449372 CEP120Q8N960 986 aa15.59■□□□□ 0.09
SYNGAP1-204ENST00000449372 EAF2Q96CJ1 260 aaPredicted RBP15.59■□□□□ 0.09
SYNGAP1-204ENST00000449372 MED4Q9NPJ6 270 aa15.59■□□□□ 0.09
SYNGAP1-204ENST00000449372 CCDC69A6NI79 296 aa15.59■□□□□ 0.09
SYNGAP1-204ENST00000449372 ATP6V1AP38606 617 aa15.59■□□□□ 0.09
SYNGAP1-204ENST00000449372 ANKRD20A12PQ8NF67 263 aa15.59■□□□□ 0.09
SYNGAP1-204ENST00000449372 H7C1W4 665 aa15.58■□□□□ 0.09
SYNGAP1-204ENST00000449372 SASH3O75995 380 aa15.58■□□□□ 0.09
SYNGAP1-204ENST00000449372 CDC25BP30305 580 aa15.58■□□□□ 0.09
SYNGAP1-204ENST00000449372 ZNF165P49910 485 aa15.58■□□□□ 0.09
SYNGAP1-204ENST00000449372 CCDC93Q567U6 631 aa15.58■□□□□ 0.09
SYNGAP1-204ENST00000449372 CWC27Q6UX04 472 aaKnown RBP15.58■□□□□ 0.09
SYNGAP1-204ENST00000449372 G3BP1Q13283 466 aaKnown RBP eCLIP15.58■□□□□ 0.08
SYNGAP1-204ENST00000449372 BLOC1S2Q6QNY1 142 aa15.58■□□□□ 0.08
SYNGAP1-204ENST00000449372 CCDC83Q8IWF9 413 aa15.58■□□□□ 0.08
SYNGAP1-204ENST00000449372 SYTL4Q96C24 671 aaPredicted RBP15.58■□□□□ 0.08
SYNGAP1-204ENST00000449372 BTG4Q9NY30 223 aa15.58■□□□□ 0.08
SYNGAP1-204ENST00000449372 CFAP45Q9UL16 551 aa15.58■□□□□ 0.08
SYNGAP1-204ENST00000449372 TBC1D8O95759 1140 aa15.58■□□□□ 0.08
SYNGAP1-204ENST00000449372 PTPN12Q05209 780 aaKnown RBP15.58■□□□□ 0.08
SYNGAP1-204ENST00000449372 TTLL7Q6ZT98 887 aa15.58■□□□□ 0.08
SYNGAP1-204ENST00000449372 FOXO4P98177 505 aa15.57■□□□□ 0.08
SYNGAP1-204ENST00000449372 FAM212AQ96EL1 285 aa15.57■□□□□ 0.08
SYNGAP1-204ENST00000449372 MAP4K4O95819 1239 aaPredicted RBP15.57■□□□□ 0.08
SYNGAP1-204ENST00000449372 A1BGP04217 495 aa15.57■□□□□ 0.08
SYNGAP1-204ENST00000449372 BICD2Q8TD16 824 aa15.57■□□□□ 0.08
SYNGAP1-204ENST00000449372 DDX54Q8TDD1 881 aaKnown RBP15.57■□□□□ 0.08
SYNGAP1-204ENST00000449372 LSG1Q9H089 658 aaKnown RBP15.57■□□□□ 0.08
SYNGAP1-204ENST00000449372 BCL9O00512 1426 aa15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 ANKRD36CQ5JPF3 1778 aa15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 EVA1CP58658 441 aa15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 CCZ1BP86790 482 aa15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 CCZ1P86791 482 aaPredicted RBP15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 MMS22LQ6ZRQ5 1243 aa15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 KLHDC4Q8TBB5 520 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms