RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 CTAGE9A4FU28 777 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 PDLIM1O00151 329 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 IPO5O00410 1097 aaKnown RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 PFDN1O60925 122 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 KRT38O76015 456 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 GSTA1P08263 222 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 CCDC166P0CW27 439 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 NMIQ13287 307 aaPredicted RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 E2F4Q16254 413 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 SPECC1Q5M775 1068 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 DAAM2Q86T65 1068 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 CHD1LQ86WJ1 897 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 PPP1R9AQ9ULJ8 1098 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 TTF2Q9UNY4 1162 aaKnown RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 KIF24Q5T7B8 1368 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 GPTP24298 496 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 DDIT3P35638 169 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 BLVRAP53004 296 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 CHMP4BP1P59074 171 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 USH1GQ495M9 461 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 C6orf163Q5TEZ5 329 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 DZIP3Q86Y13 1208 aaKnown RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 RAB3IPQ96QF0 476 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 PYM1Q9BRP8 204 aaKnown RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 PAPOLBQ9NRJ5 636 aaKnown RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 SCOCQ9UIL1 159 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 AREL1O15033 823 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 TACC1O75410 805 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 RNF8O76064 485 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 FSBPO95073 299 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 CYP2E1P05181 493 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 FNTAP49354 379 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 RPS6KA3P51812 740 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 PHLDB3Q6NSJ2 640 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 ZSCAN25Q6NSZ9 544 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 NFXL1Q6ZNB6 911 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 PPFIBP1Q86W92 1011 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 C1orf131Q8NDD1 294 aaKnown RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 BCAS4Q8TDM0 211 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 SMCR8Q8TEV9 937 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 GTF3C6Q969F1 213 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 RUNDC1Q96C34 613 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 ANKIB1Q9P2G1 1089 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 CORO1CQ9ULV4 474 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 UHRF1BP1Q6BDS2 1440 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 CASKIN1Q8WXD9 1431 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 EIF3DO15371 548 aaKnown RBP eCLIP3.29□□□□□ -1.889e-7■□□□□ 9.6
CHD9-203ENST00000447540 GCLCP48506 637 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 SF3A1Q15459 793 aaKnown RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 CFAP100Q494V2 611 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 CTAGE1Q96RT6 745 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 OSBPL5Q9H0X9 879 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 FAM169AQ9Y6X4 670 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 NAIPQ13075 1403 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 STXBP3O00186 592 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 HSF2BPO75031 334 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 COPB2P35606 906 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 HSPA9P38646 679 aaKnown RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 NEK4P51957 841 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 GNG11P61952 73 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 CUL4BQ13620 913 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 SLC5A9Q2M3M2 681 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 MAP7D1Q3KQU3 841 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 LRRC49Q8IUZ0 686 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 USP6NLQ92738 828 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 CATSPER2Q96P56 530 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 CNOT10Q9H9A5 744 aaKnown RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 PRDM16Q9HAZ2 1276 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 TMED5Q9Y3A6 229 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 TADA3O75528 432 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 CHGAP10645 457 aaKnown RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 AMPHP49418 695 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 ZNF131P52739 623 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 PDIA5Q14554 519 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 SUZ12Q15022 739 aaKnown RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 CLUL1Q15846 466 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 KLC3Q6P597 504 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 ATF7IPQ6VMQ6 1270 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 SDR16C5Q8N3Y7 309 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 B4GALNT2Q8NHY0 566 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 CCDC110Q8TBZ0 833 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 LRRC45Q96CN5 670 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 SPDL1Q96EA4 605 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 USP19O94966 1318 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 TOP1P11387 765 aaKnown RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 TRIM14Q14142 442 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 CC2D1AQ6P1N0 951 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 TUBB6Q9BUF5 446 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 SEPT11Q9NVA2 429 aaKnown RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 SEPT10Q9P0V9 454 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 DSEQ9UL01 958 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 IKBKGQ9Y6K9 419 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 RALGAPBQ86X10 1494 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 GOLGA8AA7E2F4 631 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 H0YC42 278 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 GJA8P48165 433 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 CLCN2P51788 898 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 TPD52P55327 224 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 ARPC4P59998 168 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 NEK11Q8NG66 645 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms