RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	ARHGAP22	Q7Z5H3	698 aa		7.82	□□□□□ -1.16
TRIM6-205	ENST00000445329	SPDYE3	A6NKU9	549 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329		H7C1W4	665 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	CAST	P20810	708 aa	Known RBP	7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	PTGS1	P23219	599 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	STIP1	P31948	543 aa	Known RBP	7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	FOSB	P53539	338 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	DEUP1	Q05D60	604 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	SF3B2	Q13435	895 aa	Known RBP	7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	LRRC23	Q53EV4	343 aa	Predicted RBP	7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	OLFML1	Q6UWY5	402 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	CACTIN-AS1	Q8N1I8	211 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	SAMD3	Q8N6K7	520 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	FBXO9	Q9UK97	447 aa	Predicted RBP	7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	LMTK3	Q96Q04	1460 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	USP47	Q96K76	1375 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	GOLGA6L19	H0YKK7	550 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	E2F6	O75461	281 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	DDR1	Q08345	913 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	ARHGAP27	Q6ZUM4	889 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	NYAP1	Q6ZVC0	841 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	RMDN2	Q96LZ7	410 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	HOMER3	Q9NSC5	361 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	ADAMTS13	Q76LX8	1427 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	NCKAP5L	Q9HCH0	1330 aa		7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	SCAF11	Q99590	1463 aa	Known RBP	7.81	□□□□□ -1.16
TRIM6-205	ENST00000445329	MET	P08581	1390 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	DYTN	A2CJ06	578 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	ERC2	O15083	957 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	MCM2	P49736	904 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	IRF5	Q13568	498 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	CCDC80	Q76M96	950 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	SYAP1	Q96A49	352 aa	Predicted RBP	7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	MKS1	Q9NXB0	559 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	MIS18A	Q9NYP9	233 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	VPS18	Q9P253	973 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	TPX2	Q9ULW0	747 aa	Known RBP	7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	SETBP1	Q9Y6X0	1596 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	ANKRD36B	Q8N2N9	1353 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	PLEKHG1	Q9ULL1	1385 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329		K7ELQ4	463 aa	Predicted RBP	7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	SH3BP5	O60239	455 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	MBD3	O95983	291 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	KBTBD12	Q3ZCT8	623 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	CCDC65	Q8IXS2	484 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	LMBR1	Q8WVP7	490 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	TCP11	Q8WWU5	503 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	KCNN1	Q92952	543 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	THUMPD2	Q9BTF0	503 aa	Known RBP	7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	DNAAF2	Q9NVR5	837 aa	Known RBP	7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	PDZRN3	Q9UPQ7	1066 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	EID1	Q9Y6B2	187 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	LAMC1	P11047	1609 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	LRPPRC	P42704	1394 aa	Known RBP	7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	ST20-MTHFS	A0A0A6YYL1	179 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329		M0R2C6	588 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	MAP4K4	O95819	1239 aa	Predicted RBP	7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	MME	P08473	750 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	SMARCA1	P28370	1054 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	ADCY1	Q08828	1119 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	FILIP1	Q7Z7B0	1213 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	MIPOL1	Q8TD10	442 aa		7.8	□□□□□ -1.16
TRIM6-205	ENST00000445329	OPA1	O60313	960 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	SASH3	O75995	380 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	HDGF	P51858	240 aa	Known RBP	7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	PKN1	Q16512	942 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	FXN	Q16595	210 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	FILIP1L	Q4L180	1135 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	SLC30A9	Q6PML9	568 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	ANKLE2	Q86XL3	938 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	DZIP1	Q86YF9	867 aa	Known RBP	7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	SNRNP27	Q8WVK2	155 aa	Known RBP	7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	RSPH1	Q8WYR4	309 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	DNAI1	Q9UI46	699 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	MED14	O60244	1454 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	ZEB2	O60315	1214 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	KCNA2	P16389	499 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	GBP2	P32456	591 aa	Predicted RBP	7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	LRMP	Q12912	555 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	CEP57	Q86XR8	500 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	ATP11C	Q8NB49	1132 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	OR8K1	Q8NGG5	319 aa		7.79	□□□□□ -1.16
TRIM6-205	ENST00000445329	POLR1A	O95602	1720 aa	Predicted RBP	7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	ATP8B1	O43520	1251 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	HCLS1	P14317	486 aa	Predicted RBP	7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	GUCY1B3	Q02153	619 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	WLS	Q5T9L3	541 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	TMCO4	Q5TGY1	634 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	DUSP27	Q5VZP5	1158 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	MYOCD	Q8IZQ8	938 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	RUFY1	Q96T51	708 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	YIPF3	Q9GZM5	350 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	GPCPD1	Q9NPB8	672 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	EIF3A	Q14152	1382 aa	Known RBP	7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	EIF3F	O00303	357 aa	Predicted RBP	7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	EXOC5	O00471	708 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	TPPP	O94811	219 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	TBC1D8	O95759	1140 aa		7.78	□□□□□ -1.16
TRIM6-205	ENST00000445329	PTPN14	Q15678	1187 aa		7.78	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms