RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 PTPN12Q05209 780 aaKnown RBP7.7□□□□□ -1.18
HMGB3P6-201ENST00000444896 CACTIN-AS1Q8N1I8 211 aa7.7□□□□□ -1.18
HMGB3P6-201ENST00000444896 TRIM11Q96F44 468 aa7.7□□□□□ -1.18
HMGB3P6-201ENST00000444896 ZNF576Q9H609 170 aa7.7□□□□□ -1.18
HMGB3P6-201ENST00000444896 CNTNAP5Q8WYK1 1306 aa7.7□□□□□ -1.18
HMGB3P6-201ENST00000444896 GSTT1P30711 240 aa7.69□□□□□ -1.18
HMGB3P6-201ENST00000444896 DTHD1Q6ZMT9 781 aa7.69□□□□□ -1.18
HMGB3P6-201ENST00000444896 DMRTC2Q8IXT2 367 aaPredicted RBP7.69□□□□□ -1.18
HMGB3P6-201ENST00000444896 BACH2Q9BYV9 841 aa7.69□□□□□ -1.18
HMGB3P6-201ENST00000444896 MRS2Q9HD23 443 aa7.69□□□□□ -1.18
HMGB3P6-201ENST00000444896 VTI1BQ9UEU0 232 aa7.69□□□□□ -1.18
HMGB3P6-201ENST00000444896 SPDYE3A6NKU9 549 aa7.68□□□□□ -1.18
HMGB3P6-201ENST00000444896 LINC01387J3KSC0 135 aa7.68□□□□□ -1.18
HMGB3P6-201ENST00000444896 TM4SF5O14894 197 aa7.68□□□□□ -1.18
HMGB3P6-201ENST00000444896 RECKO95980 971 aa7.68□□□□□ -1.18
HMGB3P6-201ENST00000444896 XRCC5P13010 732 aaKnown RBP7.68□□□□□ -1.18
HMGB3P6-201ENST00000444896 FAAP100Q0VG06 881 aa7.68□□□□□ -1.18
HMGB3P6-201ENST00000444896 ZNF423Q2M1K9 1284 aa7.68□□□□□ -1.18
HMGB3P6-201ENST00000444896 HGSNATQ68CP4 663 aa7.68□□□□□ -1.18
HMGB3P6-201ENST00000444896 NOP53Q9NZM5 478 aaKnown RBP7.68□□□□□ -1.18
HMGB3P6-201ENST00000444896 PPME1Q9Y570 386 aa7.68□□□□□ -1.18
HMGB3P6-201ENST00000444896 USP31Q70CQ4 1352 aa7.68□□□□□ -1.18
HMGB3P6-201ENST00000444896 SOX1O00570 391 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P6-201ENST00000444896 GNB5O14775 395 aa7.67□□□□□ -1.18
HMGB3P6-201ENST00000444896 MEI1Q5TIA1 1274 aa7.67□□□□□ -1.18
HMGB3P6-201ENST00000444896 TXNDC11Q6PKC3 985 aa7.67□□□□□ -1.18
HMGB3P6-201ENST00000444896 WFDC8Q8IUA0 241 aa7.67□□□□□ -1.18
HMGB3P6-201ENST00000444896 CLEC4MQ9H2X3 399 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P6-201ENST00000444896 AKAP2Q9Y2D5 859 aa7.67□□□□□ -1.18
HMGB3P6-201ENST00000444896 ESRRAP11474 423 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P6-201ENST00000444896 CDC25BP30305 580 aa7.66□□□□□ -1.18
HMGB3P6-201ENST00000444896 RPS26P11Q5JNZ5 115 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P6-201ENST00000444896 ANKRD24Q8TF21 1146 aa7.66□□□□□ -1.18
HMGB3P6-201ENST00000444896 CRELD1Q96HD1 420 aa7.66□□□□□ -1.18
HMGB3P6-201ENST00000444896 SEC31BQ9NQW1 1179 aa7.66□□□□□ -1.18
HMGB3P6-201ENST00000444896 FAM177BA6PVY3 158 aa7.65□□□□□ -1.18
HMGB3P6-201ENST00000444896 H3BRJ5 948 aa7.65□□□□□ -1.18
HMGB3P6-201ENST00000444896 PCDH1Q08174 1060 aa7.65□□□□□ -1.18
HMGB3P6-201ENST00000444896 SETDB1Q15047 1291 aa7.65□□□□□ -1.18
HMGB3P6-201ENST00000444896 TAF1CQ15572 869 aaPredicted RBP7.65□□□□□ -1.18
HMGB3P6-201ENST00000444896 TSNAXIP1Q2TAA8 658 aa7.65□□□□□ -1.18
HMGB3P6-201ENST00000444896 TRAPPC3LQ5T215 181 aa7.65□□□□□ -1.18
HMGB3P6-201ENST00000444896 TMEM151AQ8N4L1 468 aa7.65□□□□□ -1.18
HMGB3P6-201ENST00000444896 PLVAPQ9BX97 442 aa7.65□□□□□ -1.18
HMGB3P6-201ENST00000444896 ZFYVE1Q9HBF4 777 aa7.65□□□□□ -1.18
HMGB3P6-201ENST00000444896 E9PSI1 815 aa7.64□□□□□ -1.19
HMGB3P6-201ENST00000444896 DEAF1O75398 565 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P6-201ENST00000444896 ZNF157P51786 506 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P6-201ENST00000444896 NPM2Q86SE8 214 aaKnown RBP7.64□□□□□ -1.19
HMGB3P6-201ENST00000444896 TMEM87AQ8NBN3 555 aa7.64□□□□□ -1.19
HMGB3P6-201ENST00000444896 GALNT11Q8NCW6 608 aa7.64□□□□□ -1.19
HMGB3P6-201ENST00000444896 PPM1HQ9ULR3 514 aa7.64□□□□□ -1.19
HMGB3P6-201ENST00000444896 A0A0A0MRY4 1105 aa7.63□□□□□ -1.19
HMGB3P6-201ENST00000444896 FSCN2O14926 492 aa7.63□□□□□ -1.19
HMGB3P6-201ENST00000444896 FBXO24O75426 580 aa7.63□□□□□ -1.19
HMGB3P6-201ENST00000444896 GDF11O95390 407 aa7.63□□□□□ -1.19
HMGB3P6-201ENST00000444896 B3GALT4O96024 378 aa7.63□□□□□ -1.19
HMGB3P6-201ENST00000444896 ITGAEP38570 1179 aa7.63□□□□□ -1.19
HMGB3P6-201ENST00000444896 CABP4P57796 275 aa7.63□□□□□ -1.19
HMGB3P6-201ENST00000444896 RASSF7Q02833 373 aa7.63□□□□□ -1.19
HMGB3P6-201ENST00000444896 IKBKEQ14164 716 aa7.63□□□□□ -1.19
HMGB3P6-201ENST00000444896 PRRT3Q5FWE3 981 aa7.63□□□□□ -1.19
HMGB3P6-201ENST00000444896 NECAB3Q96P71 396 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P6-201ENST00000444896 BCL11AQ9H165 835 aa7.63□□□□□ -1.19
HMGB3P6-201ENST00000444896 ST13P50502 369 aaKnown RBP7.62□□□□□ -1.19
HMGB3P6-201ENST00000444896 PIP4K2BP78356 416 aa7.62□□□□□ -1.19
HMGB3P6-201ENST00000444896 KCNMA1Q12791 1236 aa7.62□□□□□ -1.19
HMGB3P6-201ENST00000444896 TPTE2Q6XPS3 522 aa7.62□□□□□ -1.19
HMGB3P6-201ENST00000444896 WNT8BQ93098 351 aa7.62□□□□□ -1.19
HMGB3P6-201ENST00000444896 KLHDC7BQ96G42 594 aa7.62□□□□□ -1.19
HMGB3P6-201ENST00000444896 CARD10Q9BWT7 1032 aa7.62□□□□□ -1.19
HMGB3P6-201ENST00000444896 OSGEPQ9NPF4 335 aa7.62□□□□□ -1.19
HMGB3P6-201ENST00000444896 IGSF5Q9NSI5 407 aa7.62□□□□□ -1.19
HMGB3P6-201ENST00000444896 TTF2Q9UNY4 1162 aaKnown RBP7.62□□□□□ -1.19
HMGB3P6-201ENST00000444896 FAM229AH3BQW9 127 aa7.61□□□□□ -1.19
HMGB3P6-201ENST00000444896 ENC1O14682 589 aa7.61□□□□□ -1.19
HMGB3P6-201ENST00000444896 FBXO11Q86XK2 927 aa7.61□□□□□ -1.19
HMGB3P6-201ENST00000444896 FMR1NBQ8N0W7 255 aaPredicted RBP7.61□□□□□ -1.19
HMGB3P6-201ENST00000444896 DTWD1Q8N5C7 304 aa7.61□□□□□ -1.19
HMGB3P6-201ENST00000444896 SLC7A3Q8WY07 619 aa7.61□□□□□ -1.19
HMGB3P6-201ENST00000444896 SOX17Q9H6I2 414 aaPredicted RBP7.61□□□□□ -1.19
HMGB3P6-201ENST00000444896 PAGE1O75459 146 aa7.6□□□□□ -1.19
HMGB3P6-201ENST00000444896 CELA3AP09093 270 aa7.6□□□□□ -1.19
HMGB3P6-201ENST00000444896 COL8A1P27658 744 aa7.6□□□□□ -1.19
HMGB3P6-201ENST00000444896 RAC1P63000 192 aa7.6□□□□□ -1.19
HMGB3P6-201ENST00000444896 TRIM28Q13263 835 aaKnown RBP7.6□□□□□ -1.19
HMGB3P6-201ENST00000444896 FAM117BQ6P1L5 589 aa7.6□□□□□ -1.19
HMGB3P6-201ENST00000444896 SV2BQ7L1I2 683 aa7.6□□□□□ -1.19
HMGB3P6-201ENST00000444896 STK35Q8TDR2 534 aa7.6□□□□□ -1.19
HMGB3P6-201ENST00000444896 TRIM56Q9BRZ2 755 aaKnown RBP7.6□□□□□ -1.19
HMGB3P6-201ENST00000444896 TMEM39AQ9NV64 488 aa7.6□□□□□ -1.19
HMGB3P6-201ENST00000444896 KCNK4Q9NYG8 393 aa7.6□□□□□ -1.19
HMGB3P6-201ENST00000444896 GPN3Q9UHW5 284 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P6-201ENST00000444896 DLL1O00548 723 aa7.59□□□□□ -1.19
HMGB3P6-201ENST00000444896 DDX3YO15523 660 aaKnown RBP7.59□□□□□ -1.19
HMGB3P6-201ENST00000444896 FANCCQ00597 558 aa7.59□□□□□ -1.19
HMGB3P6-201ENST00000444896 C19orf57Q0VDD7 668 aa7.59□□□□□ -1.19
HMGB3P6-201ENST00000444896 ALYREFQ86V81 257 aaKnown RBP7.59□□□□□ -1.19
HMGB3P6-201ENST00000444896 MAP4K3Q8IVH8 894 aa7.59□□□□□ -1.19
HMGB3P6-201ENST00000444896 KLHL23Q8NBE8 558 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms