RNA–Protein interactions for RNA: ENST00000442744.6

UBA52-202, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA52, Length 2,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-202ENST00000442744 C17orf50Q8WW18 174 aa12.5□□□□□ -0.41
UBA52-202ENST00000442744 E2F7Q96AV8 911 aa12.5□□□□□ -0.41
UBA52-202ENST00000442744 SHPRHQ149N8 1683 aa12.5□□□□□ -0.41
UBA52-202ENST00000442744 MAGEA8P43361 318 aa12.5□□□□□ -0.41
UBA52-202ENST00000442744 TMED1Q13445 227 aa12.5□□□□□ -0.41
UBA52-202ENST00000442744 CCDC158Q5M9N0 1113 aa12.5□□□□□ -0.41
UBA52-202ENST00000442744 ERAP2Q6P179 960 aa12.5□□□□□ -0.41
UBA52-202ENST00000442744 PGBD3Q8N328 593 aa12.5□□□□□ -0.41
UBA52-202ENST00000442744 ZNF713Q8N859 430 aaPredicted RBP12.5□□□□□ -0.41
UBA52-202ENST00000442744 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.5□□□□□ -0.41
UBA52-202ENST00000442744 CCSER2Q9H7U1 834 aa12.5□□□□□ -0.41
UBA52-202ENST00000442744 ORC4O43929 436 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 FECHP22830 423 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 CASP2P42575 452 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 ESCO1Q5FWF5 840 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 TMEM164Q5U3C3 297 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 TMEM132EQ6IEE7 984 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 RNPC3Q96LT9 517 aaKnown RBP12.49□□□□□ -0.41
UBA52-202ENST00000442744 FRMD6Q96NE9 622 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 SERINC2Q96SA4 455 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 LGR6Q9HBX8 967 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 XPO7Q9UIA9 1087 aaKnown RBP12.49□□□□□ -0.41
UBA52-202ENST00000442744 A6NCN8 305 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 H0Y3Z8 333 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 RPL17P18621 184 aaKnown RBP12.49□□□□□ -0.41
UBA52-202ENST00000442744 SNX16P57768 344 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 SLMAPQ14BN4 828 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 ACBD5Q5T8D3 534 aaPredicted RBP12.49□□□□□ -0.41
UBA52-202ENST00000442744 MNS1Q8NEH6 495 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 NLRP2Q9NX02 1062 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 TMOD4Q9NZQ9 345 aa12.49□□□□□ -0.41
UBA52-202ENST00000442744 TSPOAP1O95153 1857 aa12.48□□□□□ -0.41
UBA52-202ENST00000442744 MROH2AA6NES4 1674 aa12.48□□□□□ -0.41
UBA52-202ENST00000442744 GTPBP10A4D1E9 387 aaKnown RBP12.48□□□□□ -0.41
UBA52-202ENST00000442744 CCDC159P0C7I6 412 aa12.48□□□□□ -0.41
UBA52-202ENST00000442744 RASA1P20936 1047 aa12.48□□□□□ -0.41
UBA52-202ENST00000442744 SEC13P55735 322 aa12.48□□□□□ -0.41
UBA52-202ENST00000442744 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.48□□□□□ -0.41
UBA52-202ENST00000442744 SWT1Q5T5J6 900 aaKnown RBP12.48□□□□□ -0.41
UBA52-202ENST00000442744 CTR9Q6PD62 1173 aa12.48□□□□□ -0.41
UBA52-202ENST00000442744 CFAP65Q6ZU64 1925 aaKnown RBP12.48□□□□□ -0.41
UBA52-202ENST00000442744 ENPP3O14638 875 aa12.48□□□□□ -0.41
UBA52-202ENST00000442744 C14orf80Q86SX3 495 aa12.48□□□□□ -0.41
UBA52-202ENST00000442744 TFIP11Q9UBB9 837 aaKnown RBP12.48□□□□□ -0.41
UBA52-202ENST00000442744 RRP15Q9Y3B9 282 aaKnown RBP12.48□□□□□ -0.41
UBA52-202ENST00000442744 TET3O43151 1660 aa12.48□□□□□ -0.41
UBA52-202ENST00000442744 XRCC5P13010 732 aaKnown RBP12.47□□□□□ -0.41
UBA52-202ENST00000442744 PARP10Q53GL7 1025 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 RASGRP2Q7LDG7 609 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 BHMTQ93088 406 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 GPR101Q96P66 508 aaPredicted RBP12.47□□□□□ -0.41
UBA52-202ENST00000442744 KIF2CQ99661 725 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 ANO2Q9NQ90 1003 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 TYW1Q9NV66 732 aaKnown RBP12.47□□□□□ -0.41
UBA52-202ENST00000442744 MAPK8IP3Q9UPT6 1336 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 POLR3AO14802 1390 aaPredicted RBP12.47□□□□□ -0.41
UBA52-202ENST00000442744 SLC27A2O14975 620 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 MYL1P05976 194 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 RFC5P40937 340 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 MTHFSP49914 203 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 SH3BGRP55822 239 aaPredicted RBP12.47□□□□□ -0.41
UBA52-202ENST00000442744 SLFNL1Q499Z3 407 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 NUTM2DQ5VT03 806 aaPredicted RBP12.47□□□□□ -0.41
UBA52-202ENST00000442744 NFXL1Q6ZNB6 911 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 C11orf74Q86VG3 221 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 BRSK2Q8IWQ3 736 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 IPCEF1Q8WWN9 437 aaPredicted RBP12.47□□□□□ -0.41
UBA52-202ENST00000442744 SNX21Q969T3 373 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 FAM161BQ96MY7 647 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 RTEL1-TNFRSF6BF6WH68 1400 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 KIAA1210Q9ULL0 1709 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 DEPDC5O75140 1603 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 ARAP3Q8WWN8 1544 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 ELL2O00472 640 aaPredicted RBP12.47□□□□□ -0.41
UBA52-202ENST00000442744 BBOX1O75936 387 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 HOXD10P28358 340 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 INF2Q27J81 1249 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 GMLQ99445 158 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.47□□□□□ -0.41
UBA52-202ENST00000442744 ANTXR1Q9H6X2 564 aa12.47□□□□□ -0.41
UBA52-202ENST00000442744 TSPAN6O43657 245 aa12.46□□□□□ -0.41
UBA52-202ENST00000442744 GLULP15104 373 aa12.46□□□□□ -0.41
UBA52-202ENST00000442744 UNC5DQ6UXZ4 953 aa12.46□□□□□ -0.41
UBA52-202ENST00000442744 MED4Q9NPJ6 270 aa12.46□□□□□ -0.41
UBA52-202ENST00000442744 MRGBPQ9NV56 204 aa12.46□□□□□ -0.41
UBA52-202ENST00000442744 SLAIN2Q9P270 581 aa12.46□□□□□ -0.41
UBA52-202ENST00000442744 STAG3Q9UJ98 1225 aa12.46□□□□□ -0.41
UBA52-202ENST00000442744 SMARCA1P28370 1054 aa12.46□□□□□ -0.42
UBA52-202ENST00000442744 CTHP32929 405 aa12.46□□□□□ -0.42
UBA52-202ENST00000442744 BPIFB3P59826 476 aa12.46□□□□□ -0.42
UBA52-202ENST00000442744 LUZP4Q9P127 313 aa12.46□□□□□ -0.42
UBA52-202ENST00000442744 NOS1P29475 1434 aa12.45□□□□□ -0.42
UBA52-202ENST00000442744 SMTNL1A8MU46 457 aa12.45□□□□□ -0.42
UBA52-202ENST00000442744 PPFIA2O75334 1257 aa12.45□□□□□ -0.42
UBA52-202ENST00000442744 INMTO95050 263 aa12.45□□□□□ -0.42
UBA52-202ENST00000442744 NUCB1Q02818 461 aa12.45□□□□□ -0.42
UBA52-202ENST00000442744 KIAA1614Q5VZ46 1190 aa12.45□□□□□ -0.42
UBA52-202ENST00000442744 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.45□□□□□ -0.42
UBA52-202ENST00000442744 SYAP1Q96A49 352 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms