RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 TNS3Q68CZ2 1445 aa15.83■□□□□ 0.13
HERPUD1-204ENST00000439977 EVA1CP58658 441 aa15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 IFIT5Q13325 482 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 TPD52L1Q16890 204 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 INCENPQ9NQS7 918 aa15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 WDR17Q8IZU2 1322 aa15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 USP27XA6NNY8 438 aa15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 ERVV-2B6SEH9 535 aa15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 GPAA1O43292 621 aa15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 TNNT1P13805 278 aa15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 IL2RBP14784 551 aa15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 STK38Q15208 465 aa15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 HLFQ16534 295 aa15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 METTL24Q5JXM2 366 aa15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 LDHAL6AQ6ZMR3 332 aa15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 RALYLQ86SE5 291 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 TRMT1Q9NXH9 659 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-204ENST00000439977 IDH1O75874 414 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 ANTXR2P58335 489 aa15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 SNAP23O00161 211 aa15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 ZNF213O14771 459 aa15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 CIAO1O76071 339 aa15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 MARCKSP29966 332 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 GTF2F1P35269 517 aaKnown RBP eCLIP15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 CBX1P83916 185 aa15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 PPP4R3BQ5MIZ7 849 aa15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 DHX40Q8IX18 779 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 HELBQ8NG08 1087 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 ISCA1Q9BUE6 129 aa15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 GREM2Q9H772 168 aa15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 HPS5Q9UPZ3 1129 aa15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 ARFGEF2Q9Y6D5 1785 aa15.82■□□□□ 0.12
HERPUD1-204ENST00000439977 SPDYE4A6NLX3 237 aa15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 KIF28PB7ZC32 967 aa15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 SLC9C2Q5TAH2 1124 aa15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 BRINP3Q76B58 766 aa15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 STK11IPQ8N1F8 1099 aa15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 TMOD3Q9NYL9 352 aa15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 MCAMP43121 646 aa15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 MRPS27Q92552 414 aaKnown RBP15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 SENP2Q9HC62 589 aa15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 ALS2Q96Q42 1657 aa15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 ATP2B3Q16720 1220 aa15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 DPCR1Q3MIW9 517 aa15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 LRRC8AQ8IWT6 810 aa15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 CTNNA3Q9UI47 895 aa15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 AKAP2Q9Y2D5 859 aa15.81■□□□□ 0.12
HERPUD1-204ENST00000439977 UBE2Q2LH0YL09 131 aa15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 ITGA6P23229 1130 aa15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 FMR1NBQ8N0W7 255 aaPredicted RBP15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 KLHL34Q8N239 644 aa15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 LINC00301Q8NCQ3 95 aa15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 SYTL4Q96C24 671 aaPredicted RBP15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 MYL10Q9BUA6 226 aa15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 CNNM1Q9NRU3 951 aa15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 ZNF142P52746 1687 aaPredicted RBP15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 CTAGE5O15320 804 aa15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 MTERF4Q7Z6M4 381 aaKnown RBP15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 MB21D2Q8IYB1 491 aaPredicted RBP15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 FBXO18Q8NFZ0 1043 aa15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 NCOA7Q8NI08 942 aa15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 APPBP2Q92624 585 aa15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 PHKBQ93100 1093 aa15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 ANO10Q9NW15 660 aa15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 LMTK3Q96Q04 1460 aa15.8■□□□□ 0.12
HERPUD1-204ENST00000439977 SKILP12757 684 aa15.79■□□□□ 0.12
HERPUD1-204ENST00000439977 KIF6Q6ZMV9 814 aa15.79■□□□□ 0.12
HERPUD1-204ENST00000439977 A0A0G2JS52 829 aa15.79■□□□□ 0.12
HERPUD1-204ENST00000439977 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-204ENST00000439977 PIGBQ92521 554 aa15.79■□□□□ 0.12
HERPUD1-204ENST00000439977 ATG3Q9NT62 314 aa15.79■□□□□ 0.12
HERPUD1-204ENST00000439977 ZRSR1Q15695 479 aaKnown RBP15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 ADALQ6DHV7 355 aa15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 SYNE3Q6ZMZ3 975 aa15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 MICU3Q86XE3 530 aa15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 CEP57L1Q8IYX8 460 aa15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 CCDC94Q9BW85 323 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 RTEL1Q9NZ71 1219 aa15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 SPTLC2O15270 562 aa15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 MYSM1Q5VVJ2 828 aa15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 TBC1D10CQ8IV04 446 aa15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 NBPF3Q9H094 633 aa15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 COL18A1P39060 1754 aa15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 CCDC69A6NI79 296 aa15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 B4E1Z4 1266 aa15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 CYB5R4Q7L1T6 521 aa15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 PDCL2Q8N4E4 241 aa15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 ZBTB38Q8NAP3 1195 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 PIH1D3Q9NQM4 214 aaKnown RBP15.78■□□□□ 0.12
HERPUD1-204ENST00000439977 U2AF2P26368 475 aaKnown RBP eCLIP15.77■□□□□ 0.128e-8■■□□□ 14.2
HERPUD1-204ENST00000439977 PTPN21Q16825 1174 aa15.77■□□□□ 0.12
HERPUD1-204ENST00000439977 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.77■□□□□ 0.12
HERPUD1-204ENST00000439977 TBC1D2BQ9UPU7 963 aa15.77■□□□□ 0.12
HERPUD1-204ENST00000439977 V9GYY5 206 aaPredicted RBP15.77■□□□□ 0.12
HERPUD1-204ENST00000439977 SMC2O95347 1197 aa15.77■□□□□ 0.11
HERPUD1-204ENST00000439977 TRDNQ13061 729 aa15.77■□□□□ 0.11
HERPUD1-204ENST00000439977 TTLL11Q8NHH1 800 aa15.77■□□□□ 0.11
HERPUD1-204ENST00000439977 KIF1AQ12756 1690 aa15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 DHX16O60231 1041 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-204ENST00000439977 WDHD1O75717 1129 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms