RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 SURF6O75683 361 aaKnown RBP5.77□□□□□ -1.49
EDEM3-203ENST00000439962 ALDH1L1O75891 902 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 GNAI3P08754 354 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 TTLL12Q14166 644 aaPredicted RBP5.77□□□□□ -1.49
EDEM3-203ENST00000439962 RABEP1Q15276 862 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 NBPF9Q3BBW0 867 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 PI16Q6UXB8 463 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 GPC2Q8N158 579 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 EYA3Q99504 573 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 HDAC5Q9UQL6 1122 aa5.77□□□□□ -1.49
EDEM3-203ENST00000439962 SBF1O95248 1867 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 CDHR2Q9BYE9 1310 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 ADORA1P30542 326 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 HIRAP54198 1017 aaPredicted RBP5.76□□□□□ -1.49
EDEM3-203ENST00000439962 TTC22Q5TAA0 569 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 MOB2Q70IA6 237 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 USP48Q86UV5 1035 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 SIRT2Q8IXJ6 389 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 SUPT20HQ8NEM7 779 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 RANBP2P49792 3224 aaKnown RBP5.76□□□□□ -1.49
EDEM3-203ENST00000439962 AK9Q5TCS8 1911 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 RTL9Q8NET4 1388 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 KIF13BQ9NQT8 1826 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 IQCA1LA6NCM1 817 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 CSF1RP07333 972 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 TFCP2Q12800 502 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 GRIK5Q16478 980 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 ANKRD45Q5TZF3 282 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 CC2D2BQ6DHV5 1058 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 CEP85Q6P2H3 762 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 OGFOD1Q8N543 542 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 GGA3Q9NZ52 723 aa5.76□□□□□ -1.49
EDEM3-203ENST00000439962 SPEF2Q9C093 1822 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 NRXN2Q9P2S2 1712 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 REC8O95072 547 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 GNAI2P04899 355 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 ATP2B4P23634 1241 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 PTPN12Q05209 780 aaKnown RBP5.75□□□□□ -1.49
EDEM3-203ENST00000439962 TNIP1Q15025 636 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 MFSD14BQ5SR56 506 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 ANGEL2Q5VTE6 544 aaKnown RBP5.75□□□□□ -1.49
EDEM3-203ENST00000439962 TBC1D9Q6ZT07 1266 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 KRT26Q7Z3Y9 468 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 PLEKHM2Q8IWE5 1019 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 GBP4Q96PP9 640 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 CCDC8Q9H0W5 538 aaPredicted RBP5.75□□□□□ -1.49
EDEM3-203ENST00000439962 CD209Q9NNX6 404 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 GPRC5DQ9NZD1 345 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 CEP126Q9P2H0 1117 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 A0A0C4DFX4 3053 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 USP17L3A6NCW0 530 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 USP17L4A6NCW7 530 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 CELF2O95319 508 aaKnown RBP5.75□□□□□ -1.49
EDEM3-203ENST00000439962 HSPA6P17066 643 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 MCM2P49736 904 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 TSHZ3Q63HK5 1081 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 USP17L1Q7RTZ2 530 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 SMC1BQ8NDV3 1235 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 LNPKQ9C0E8 428 aa5.75□□□□□ -1.49
EDEM3-203ENST00000439962 CWC22Q9HCG8 908 aaKnown RBP5.75□□□□□ -1.49
EDEM3-203ENST00000439962 K7ELQ4 463 aaPredicted RBP5.74□□□□□ -1.49
EDEM3-203ENST00000439962 USP17L8P0C7I0 530 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 HIBADHP31937 336 aaKnown RBP5.74□□□□□ -1.49
EDEM3-203ENST00000439962 MCM4P33991 863 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 MFAP1P55081 439 aaKnown RBP5.74□□□□□ -1.49
EDEM3-203ENST00000439962 ANAPC15P60006 121 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 G3BP1Q13283 466 aaKnown RBP eCLIP5.74□□□□□ -1.49
EDEM3-203ENST00000439962 DIXDC1Q155Q3 683 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 KIF4BQ2VIQ3 1234 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 CAVIN4Q5BKX8 364 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 COL24A1Q17RW2 1714 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 DDX60Q8IY21 1712 aaKnown RBP5.74□□□□□ -1.49
EDEM3-203ENST00000439962 TCP10L2B9ZVM9 353 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 SMARCA5O60264 1052 aaPredicted RBP5.74□□□□□ -1.49
EDEM3-203ENST00000439962 RAB11FIP3O75154 756 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 CAPN15O75808 1086 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 SLURP2P0DP57 97 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 PHKA1P46020 1223 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 TCP10Q12799 353 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 SCARF1Q14162 830 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 ATP2B3Q16720 1220 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 CYP4F22Q6NT55 531 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 CHADLQ6NUI6 762 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 CERS5Q8N5B7 392 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 FAM84BQ96KN1 310 aaPredicted RBP5.74□□□□□ -1.49
EDEM3-203ENST00000439962 ANKRD2Q9GZV1 360 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 STAP2Q9UGK3 403 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 TTF2Q9UNY4 1162 aaKnown RBP5.74□□□□□ -1.49
EDEM3-203ENST00000439962 RIPOR2Q9Y4F9 1068 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 ANKRD36CQ5JPF3 1778 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 SALL3Q9BXA9 1300 aa5.74□□□□□ -1.49
EDEM3-203ENST00000439962 ARFGEF1Q9Y6D6 1849 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 EYA2O00167 538 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 PDE8BO95263 885 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 RAB3GAP1Q15042 981 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 ZNF804AQ7Z570 1209 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 LAMB2P55268 1798 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 FER1L6Q2WGJ9 1857 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 LTBP3Q9NS15 1303 aa5.73□□□□□ -1.49
EDEM3-203ENST00000439962 A0A1B0GUL7 405 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 244.2 ms