RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CDC25BP30305 580 aa6.45□□□□□ -1.38
TRAPPC13-204ENST00000438419 COL19A1Q14993 1142 aa6.45□□□□□ -1.38
TRAPPC13-204ENST00000438419 SHISA2Q6UWI4 295 aa6.45□□□□□ -1.38
TRAPPC13-204ENST00000438419 PI16Q6UXB8 463 aa6.45□□□□□ -1.38
TRAPPC13-204ENST00000438419 VN1R5Q7Z5H4 357 aa6.45□□□□□ -1.38
TRAPPC13-204ENST00000438419 CCNJLQ8IV13 435 aa6.45□□□□□ -1.38
TRAPPC13-204ENST00000438419 SETDB2Q96T68 719 aa6.45□□□□□ -1.38
TRAPPC13-204ENST00000438419 PODXL2Q9NZ53 605 aa6.45□□□□□ -1.38
TRAPPC13-204ENST00000438419 PNMA6FA0A0J9YX94 578 aa6.44□□□□□ -1.38
TRAPPC13-204ENST00000438419 DLL1O00548 723 aa6.44□□□□□ -1.38
TRAPPC13-204ENST00000438419 GRIA4P48058 902 aa6.44□□□□□ -1.38
TRAPPC13-204ENST00000438419 GALNT11Q8NCW6 608 aa6.44□□□□□ -1.38
TRAPPC13-204ENST00000438419 MUC3BQ9H195 1237 aa6.44□□□□□ -1.38
TRAPPC13-204ENST00000438419 LIN7BQ9HAP6 207 aa6.44□□□□□ -1.38
TRAPPC13-204ENST00000438419 WWC3Q9ULE0 1092 aa6.44□□□□□ -1.38
TRAPPC13-204ENST00000438419 P4HBP07237 508 aaKnown RBP6.43□□□□□ -1.38
TRAPPC13-204ENST00000438419 SPRED3Q2MJR0 410 aa6.43□□□□□ -1.38
TRAPPC13-204ENST00000438419 HGSNATQ68CP4 663 aa6.43□□□□□ -1.38
TRAPPC13-204ENST00000438419 BSNDQ8WZ55 320 aa6.43□□□□□ -1.38
TRAPPC13-204ENST00000438419 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
TRAPPC13-204ENST00000438419 MAPK8P45983 427 aa6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 GRM2Q14416 872 aa6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 FOXD4L6Q3SYB3 417 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 FOXD4L3Q6VB84 417 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 NPAS4Q8IUM7 802 aa6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 GLIS3Q8NEA6 775 aa6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 ASAP3Q8TDY4 903 aa6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 LENG1Q96BZ8 264 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 CARD10Q9BWT7 1032 aa6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 EHD4Q9H223 541 aa6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 A0A096LPE4 126 aa6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 A0A1W2PPZ6 126 aa6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 H3BRJ5 948 aa6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 FSCN2O14926 492 aa6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 YBX3P16989 372 aaKnown RBP eCLIP6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 FGD1P98174 961 aa6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 MAP4K3Q8IVH8 894 aa6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 SRA1Q9HD15 236 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 KCNK4Q9NYG8 393 aa6.42□□□□□ -1.38
TRAPPC13-204ENST00000438419 SOX1O00570 391 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-204ENST00000438419 GADD45BO75293 160 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-204ENST00000438419 APBA3O96018 575 aa6.41□□□□□ -1.38
TRAPPC13-204ENST00000438419 ATP2B2Q01814 1243 aa6.41□□□□□ -1.38
TRAPPC13-204ENST00000438419 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.41□□□□□ -1.38
TRAPPC13-204ENST00000438419 PRPF40BQ6NWY9 871 aaKnown RBP6.41□□□□□ -1.38
TRAPPC13-204ENST00000438419 IGF2-ASQ6U949 168 aa6.41□□□□□ -1.38
TRAPPC13-204ENST00000438419 KLHDC7BQ96G42 594 aa6.41□□□□□ -1.38
TRAPPC13-204ENST00000438419 ABCB6Q9NP58 842 aa6.41□□□□□ -1.38
TRAPPC13-204ENST00000438419 C9orf172C9J069 976 aa6.4□□□□□ -1.39
TRAPPC13-204ENST00000438419 DDX3YO15523 660 aaKnown RBP6.4□□□□□ -1.39
TRAPPC13-204ENST00000438419 ADAM11O75078 769 aa6.4□□□□□ -1.39
TRAPPC13-204ENST00000438419 ITPKAP23677 461 aa6.4□□□□□ -1.39
TRAPPC13-204ENST00000438419 PIP4K2BP78356 416 aa6.4□□□□□ -1.39
TRAPPC13-204ENST00000438419 ADGRE1Q14246 886 aa6.4□□□□□ -1.39
TRAPPC13-204ENST00000438419 ZNF423Q2M1K9 1284 aa6.4□□□□□ -1.39
TRAPPC13-204ENST00000438419 EAPPQ56P03 285 aaPredicted RBP6.4□□□□□ -1.39
TRAPPC13-204ENST00000438419 FBF1Q8TES7 1133 aa6.4□□□□□ -1.39
TRAPPC13-204ENST00000438419 WNT8BQ93098 351 aa6.4□□□□□ -1.39
TRAPPC13-204ENST00000438419 NACC1Q96RE7 527 aa6.4□□□□□ -1.39
TRAPPC13-204ENST00000438419 TMEM238LA0A1B0GVL6 79 aa6.39□□□□□ -1.39
TRAPPC13-204ENST00000438419 WISP1O95388 367 aa6.39□□□□□ -1.39
TRAPPC13-204ENST00000438419 ESRRAP11474 423 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC13-204ENST00000438419 CD68P34810 354 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC13-204ENST00000438419 CABP4P57796 275 aa6.39□□□□□ -1.39
TRAPPC13-204ENST00000438419 IKBKEQ14164 716 aa6.39□□□□□ -1.39
TRAPPC13-204ENST00000438419 MBTPS1Q14703 1052 aa6.39□□□□□ -1.39
TRAPPC13-204ENST00000438419 ALG1LQ6GMV1 187 aa6.39□□□□□ -1.39
TRAPPC13-204ENST00000438419 KLHL23Q8NBE8 558 aa6.39□□□□□ -1.39
TRAPPC13-204ENST00000438419 ARID1BQ8NFD5 2236 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC13-204ENST00000438419 BCO2Q9BYV7 579 aa6.39□□□□□ -1.39
TRAPPC13-204ENST00000438419 OSGEPQ9NPF4 335 aa6.39□□□□□ -1.39
TRAPPC13-204ENST00000438419 SEC31BQ9NQW1 1179 aa6.39□□□□□ -1.39
TRAPPC13-204ENST00000438419 NLRP2Q9NX02 1062 aa6.39□□□□□ -1.39
TRAPPC13-204ENST00000438419 FAM177BA6PVY3 158 aa6.38□□□□□ -1.39
TRAPPC13-204ENST00000438419 LDHBP07195 334 aaKnown RBP6.38□□□□□ -1.39
TRAPPC13-204ENST00000438419 FAM117BQ6P1L5 589 aa6.38□□□□□ -1.39
TRAPPC13-204ENST00000438419 NXPE4Q6UWF7 544 aa6.38□□□□□ -1.39
TRAPPC13-204ENST00000438419 FOXD4L4Q8WXT5 416 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC13-204ENST00000438419 SLC7A3Q8WY07 619 aa6.38□□□□□ -1.39
TRAPPC13-204ENST00000438419 KRTAP4-2Q9BYR5 136 aa6.38□□□□□ -1.39
TRAPPC13-204ENST00000438419 OSBPL7Q9BZF2 842 aa6.38□□□□□ -1.39
TRAPPC13-204ENST00000438419 CLEC4MQ9H2X3 399 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC13-204ENST00000438419 ZNF576Q9H609 170 aa6.38□□□□□ -1.39
TRAPPC13-204ENST00000438419 RNF19AQ9NV58 838 aa6.38□□□□□ -1.39
TRAPPC13-204ENST00000438419 PRPF40AO75400 957 aaKnown RBP6.37□□□□□ -1.39
TRAPPC13-204ENST00000438419 NRG1Q02297 640 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC13-204ENST00000438419 PTPN12Q05209 780 aaKnown RBP6.37□□□□□ -1.39
TRAPPC13-204ENST00000438419 PCDH1Q08174 1060 aa6.37□□□□□ -1.39
TRAPPC13-204ENST00000438419 C19orf57Q0VDD7 668 aa6.37□□□□□ -1.39
TRAPPC13-204ENST00000438419 TMEM130Q8N3G9 435 aa6.37□□□□□ -1.39
TRAPPC13-204ENST00000438419 USP21Q9UK80 565 aa6.37□□□□□ -1.39
TRAPPC13-204ENST00000438419 TRAK1Q9UPV9 953 aa6.37□□□□□ -1.39
TRAPPC13-204ENST00000438419 F8W735 103 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC13-204ENST00000438419 ALX3O95076 343 aa6.36□□□□□ -1.39
TRAPPC13-204ENST00000438419 NOS3P29474 1203 aa6.36□□□□□ -1.39
TRAPPC13-204ENST00000438419 GATA4P43694 442 aa6.36□□□□□ -1.39
TRAPPC13-204ENST00000438419 FBXO33Q7Z6M2 555 aa6.36□□□□□ -1.39
TRAPPC13-204ENST00000438419 RGS22Q8NE09 1264 aa6.36□□□□□ -1.39
TRAPPC13-204ENST00000438419 WFDC12Q8WWY7 111 aa6.36□□□□□ -1.39
TRAPPC13-204ENST00000438419 BCL2L13Q9BXK5 485 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms