RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 EAF1Q96JC9 268 aaPredicted RBP8.6□□□□□ -1.03
SPEN-202ENST00000438066 NBPF4Q96M43 638 aa8.6□□□□□ -1.03
SPEN-202ENST00000438066 CEP63Q96MT8 703 aa8.6□□□□□ -1.03
SPEN-202ENST00000438066 GINM1Q9NU53 330 aa8.6□□□□□ -1.03
SPEN-202ENST00000438066 KANSL3Q9P2N6 904 aa8.6□□□□□ -1.03
SPEN-202ENST00000438066 POTECB2RU33 542 aa8.6□□□□□ -1.03
SPEN-202ENST00000438066 XRCC5P13010 732 aaKnown RBP8.6□□□□□ -1.03
SPEN-202ENST00000438066 TTC39BQ5VTQ0 682 aaPredicted RBP8.6□□□□□ -1.03
SPEN-202ENST00000438066 ZNF296Q8WUU4 475 aaPredicted RBP8.6□□□□□ -1.03
SPEN-202ENST00000438066 TMEM74Q96NL1 305 aa8.6□□□□□ -1.03
SPEN-202ENST00000438066 SRPK1Q96SB4 655 aaKnown RBP8.6□□□□□ -1.03
SPEN-202ENST00000438066 TSEN34Q9BSV6 310 aaKnown RBP8.6□□□□□ -1.03
SPEN-202ENST00000438066 PKD2L1Q9P0L9 805 aa8.6□□□□□ -1.03
SPEN-202ENST00000438066 TEX14Q8IWB6 1497 aa8.59□□□□□ -1.03
SPEN-202ENST00000438066 ZFYVE16Q7Z3T8 1539 aa8.59□□□□□ -1.03
SPEN-202ENST00000438066 TTC24A2A3L6 582 aaPredicted RBP8.59□□□□□ -1.03
SPEN-202ENST00000438066 CYP2E1P05181 493 aaPredicted RBP8.59□□□□□ -1.03
SPEN-202ENST00000438066 TSPY4P0CV99 314 aa8.59□□□□□ -1.03
SPEN-202ENST00000438066 TSPY10P0CW01 314 aa8.59□□□□□ -1.03
SPEN-202ENST00000438066 HSD3B2P26439 372 aa8.59□□□□□ -1.03
SPEN-202ENST00000438066 MAP3K10Q02779 954 aa8.59□□□□□ -1.03
SPEN-202ENST00000438066 NLRP13Q86W25 1043 aa8.59□□□□□ -1.03
SPEN-202ENST00000438066 PMEPA1Q969W9 287 aa8.59□□□□□ -1.03
SPEN-202ENST00000438066 TRIM55Q9BYV6 548 aa8.59□□□□□ -1.03
SPEN-202ENST00000438066 TRAK1Q9UPV9 953 aa8.59□□□□□ -1.03
SPEN-202ENST00000438066 AKAP2Q9Y2D5 859 aa8.59□□□□□ -1.03
SPEN-202ENST00000438066 MAGI2Q86UL8 1455 aa8.59□□□□□ -1.03
SPEN-202ENST00000438066 INO80Q9ULG1 1556 aaPredicted RBP8.59□□□□□ -1.03
SPEN-202ENST00000438066 DUOX2Q9NRD8 1548 aa8.58□□□□□ -1.04
SPEN-202ENST00000438066 IQGAP3Q86VI3 1631 aa8.58□□□□□ -1.04
SPEN-202ENST00000438066 A0A1W2PP55 124 aa8.58□□□□□ -1.04
SPEN-202ENST00000438066 SPINT1O43278 529 aa8.58□□□□□ -1.04
SPEN-202ENST00000438066 CLSTN1O94985 981 aa8.58□□□□□ -1.04
SPEN-202ENST00000438066 VEGFBP49765 207 aa8.58□□□□□ -1.04
SPEN-202ENST00000438066 PTPROQ16827 1216 aa8.58□□□□□ -1.04
SPEN-202ENST00000438066 KIAA0319Q5VV43 1072 aa8.58□□□□□ -1.04
SPEN-202ENST00000438066 OXCT2Q9BYC2 517 aaPredicted RBP8.58□□□□□ -1.04
SPEN-202ENST00000438066 FANCAO15360 1455 aa8.57□□□□□ -1.04
SPEN-202ENST00000438066 A0A1W2PNR3 127 aa8.57□□□□□ -1.04
SPEN-202ENST00000438066 FAM160A1Q05DH4 1040 aa8.57□□□□□ -1.04
SPEN-202ENST00000438066 CTC1Q2NKJ3 1217 aa8.57□□□□□ -1.04
SPEN-202ENST00000438066 PEAR1Q5VY43 1037 aaPredicted RBP8.57□□□□□ -1.04
SPEN-202ENST00000438066 FBXL19Q6PCT2 694 aa8.57□□□□□ -1.04
SPEN-202ENST00000438066 GJA3Q9Y6H8 435 aa8.57□□□□□ -1.04
SPEN-202ENST00000438066 FAM135AQ9P2D6 1515 aa8.57□□□□□ -1.04
SPEN-202ENST00000438066 TRAPPC8Q9Y2L5 1435 aa8.57□□□□□ -1.04
SPEN-202ENST00000438066 CFAP74Q9C0B2 1584 aa8.57□□□□□ -1.04
SPEN-202ENST00000438066 hCG_2014768A0A024R1R8 64 aa8.57□□□□□ -1.04
SPEN-202ENST00000438066 RAB11FIP3O75154 756 aa8.57□□□□□ -1.04
SPEN-202ENST00000438066 MSX1P28360 303 aa8.57□□□□□ -1.04
SPEN-202ENST00000438066 EFCAB2Q5VUJ9 269 aa8.57□□□□□ -1.04
SPEN-202ENST00000438066 ZNF598Q86UK7 904 aaKnown RBP8.57□□□□□ -1.04
SPEN-202ENST00000438066 HNRNPLLQ8WVV9 542 aaKnown RBP8.57□□□□□ -1.04
SPEN-202ENST00000438066 TLR6Q9Y2C9 796 aa8.57□□□□□ -1.04
SPEN-202ENST00000438066 ERBINQ96RT1 1412 aa8.56□□□□□ -1.04
SPEN-202ENST00000438066 CCDC85CA6NKD9 419 aa8.56□□□□□ -1.04
SPEN-202ENST00000438066 U2SURPO15042 1029 aaKnown RBP8.56□□□□□ -1.04
SPEN-202ENST00000438066 EGFRP00533 1210 aa8.56□□□□□ -1.04
SPEN-202ENST00000438066 EDN3P14138 238 aa8.56□□□□□ -1.04
SPEN-202ENST00000438066 DTHD1Q6ZMT9 781 aa8.56□□□□□ -1.04
SPEN-202ENST00000438066 LINC00528Q8N1L1 170 aa8.56□□□□□ -1.04
SPEN-202ENST00000438066 CPLX3Q8WVH0 158 aa8.56□□□□□ -1.04
SPEN-202ENST00000438066 MKL1Q969V6 931 aa8.56□□□□□ -1.04
SPEN-202ENST00000438066 ANAPC16Q96DE5 110 aa8.56□□□□□ -1.04
SPEN-202ENST00000438066 BRD7Q9NPI1 651 aa8.56□□□□□ -1.04
SPEN-202ENST00000438066 UBP1Q9NZI7 540 aa8.56□□□□□ -1.04
SPEN-202ENST00000438066 SIRPGQ9P1W8 387 aa8.56□□□□□ -1.04
SPEN-202ENST00000438066 DEPDC5O75140 1603 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 A0A1B0GTH6 734 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 RHOQP17081 205 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 SOX9P48436 509 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 IGBP1P78318 339 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 TPTE2Q6XPS3 522 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 KRT25Q7Z3Z0 450 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 ABCB6Q9NP58 842 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 TIMMDC1Q9NPL8 285 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 RTEL1-TNFRSF6BF6WH68 1400 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 RIMBP3CA6NJZ7 1639 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 RIMBP3BA6NNM3 1639 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 RIMBP3Q9UFD9 1639 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 NUP155O75694 1391 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 ATP7AQ04656 1500 aa8.55□□□□□ -1.04
SPEN-202ENST00000438066 KLF4O43474 513 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 SASH3O75995 380 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 RAB33AQ14088 237 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 CDAN1Q8IWY9 1227 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 RNF217Q8TC41 542 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 KCNB2Q92953 911 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 RHOVQ96L33 236 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 NT5C1AQ9BXI3 368 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 ZCCHC2Q9C0B9 1178 aaKnown RBP8.54□□□□□ -1.04
SPEN-202ENST00000438066 SNTG2Q9NY99 539 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 STRIP2Q9ULQ0 834 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 PPM1HQ9ULR3 514 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 UPP2O95045 317 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 RNF187Q5TA31 235 aaPredicted RBP8.54□□□□□ -1.04
SPEN-202ENST00000438066 LYSMD3Q7Z3D4 306 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 CYP4X1Q8N118 509 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 PHC3Q8NDX5 983 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 RNPC3Q96LT9 517 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms