RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 AKAP11Q9UKA4 1901 aa16.56■□□□□ 0.24
CDCA4P4-201ENST00000435216 IL1R1P14778 569 aa16.55■□□□□ 0.24
CDCA4P4-201ENST00000435216 ZBED3Q96IU2 234 aaPredicted RBP16.55■□□□□ 0.24
CDCA4P4-201ENST00000435216 FZD1Q9UP38 647 aa16.55■□□□□ 0.24
CDCA4P4-201ENST00000435216 MKRN3Q13064 507 aaKnown RBP16.54■□□□□ 0.24
CDCA4P4-201ENST00000435216 DGKZQ13574 1117 aa16.54■□□□□ 0.24
CDCA4P4-201ENST00000435216 DLGAP5Q15398 846 aa16.54■□□□□ 0.24
CDCA4P4-201ENST00000435216 SSH1Q8WYL5 1049 aa16.54■□□□□ 0.24
CDCA4P4-201ENST00000435216 BICC1Q9H694 974 aaKnown RBP16.54■□□□□ 0.24
CDCA4P4-201ENST00000435216 AOX1Q06278 1338 aa16.53■□□□□ 0.24
CDCA4P4-201ENST00000435216 E9PSI1 815 aa16.53■□□□□ 0.24
CDCA4P4-201ENST00000435216 NF2P35240 595 aa16.53■□□□□ 0.24
CDCA4P4-201ENST00000435216 GYG1P46976 350 aa16.53■□□□□ 0.24
CDCA4P4-201ENST00000435216 APOBEC3FQ8IUX4 373 aaKnown RBP16.53■□□□□ 0.24
CDCA4P4-201ENST00000435216 CDCA7LQ96GN5 454 aa16.53■□□□□ 0.24
CDCA4P4-201ENST00000435216 SAGE1Q9NXZ1 904 aa16.53■□□□□ 0.24
CDCA4P4-201ENST00000435216 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.53■□□□□ 0.24
CDCA4P4-201ENST00000435216 ECM29Q5VYK3 1845 aa16.52■□□□□ 0.24
CDCA4P4-201ENST00000435216 UTYO14607 1347 aa16.52■□□□□ 0.24
CDCA4P4-201ENST00000435216 CLRN2A0PK11 232 aa16.52■□□□□ 0.24
CDCA4P4-201ENST00000435216 SLFN5Q08AF3 891 aa16.52■□□□□ 0.24
CDCA4P4-201ENST00000435216 CFAP100Q494V2 611 aa16.52■□□□□ 0.24
CDCA4P4-201ENST00000435216 MMP14P50281 582 aa16.51■□□□□ 0.23
CDCA4P4-201ENST00000435216 PTPN12Q05209 780 aaKnown RBP16.51■□□□□ 0.23
CDCA4P4-201ENST00000435216 LRRC24Q50LG9 513 aa16.51■□□□□ 0.23
CDCA4P4-201ENST00000435216 ANKRD44Q8N8A2 993 aa16.51■□□□□ 0.23
CDCA4P4-201ENST00000435216 KLHDC4Q8TBB5 520 aa16.51■□□□□ 0.23
CDCA4P4-201ENST00000435216 PRMT6Q96LA8 375 aaPredicted RBP16.51■□□□□ 0.23
CDCA4P4-201ENST00000435216 DEFB129Q9H1M3 183 aa16.51■□□□□ 0.23
CDCA4P4-201ENST00000435216 RBM5P52756 815 aaKnown RBP eCLIP16.5■□□□□ 0.23
CDCA4P4-201ENST00000435216 UBE4AQ14139 1066 aa16.5■□□□□ 0.23
CDCA4P4-201ENST00000435216 MTMR14Q8NCE2 650 aa16.5■□□□□ 0.23
CDCA4P4-201ENST00000435216 FAM84BQ96KN1 310 aaPredicted RBP16.5■□□□□ 0.23
CDCA4P4-201ENST00000435216 VEZTQ9HBM0 779 aa16.5■□□□□ 0.23
CDCA4P4-201ENST00000435216 ANGEL1Q9UNK9 670 aaKnown RBP16.5■□□□□ 0.23
CDCA4P4-201ENST00000435216 IQSEC3Q9UPP2 1182 aaPredicted RBP16.5■□□□□ 0.23
CDCA4P4-201ENST00000435216 RIPOR2Q9Y4F9 1068 aa16.5■□□□□ 0.23
CDCA4P4-201ENST00000435216 PTPRCP08575 1304 aa16.49■□□□□ 0.23
CDCA4P4-201ENST00000435216 SSC5DA1L4H1 1573 aa16.49■□□□□ 0.23
CDCA4P4-201ENST00000435216 SPDYE2BA6NHP3 402 aa16.49■□□□□ 0.23
CDCA4P4-201ENST00000435216 SPDYE6P0CI01 402 aa16.49■□□□□ 0.23
CDCA4P4-201ENST00000435216 HIBADHP31937 336 aaKnown RBP16.49■□□□□ 0.23
CDCA4P4-201ENST00000435216 RABL6Q3YEC7 729 aaPredicted RBP16.49■□□□□ 0.23
CDCA4P4-201ENST00000435216 MFSD14BQ5SR56 506 aa16.49■□□□□ 0.23
CDCA4P4-201ENST00000435216 ARMC9Q7Z3E5 817 aa16.49■□□□□ 0.23
CDCA4P4-201ENST00000435216 TDRD7Q8NHU6 1098 aaKnown RBP16.49■□□□□ 0.23
CDCA4P4-201ENST00000435216 FAM205AQ6ZU69 1335 aa16.48■□□□□ 0.23
CDCA4P4-201ENST00000435216 TBC1D8O95759 1140 aa16.48■□□□□ 0.23
CDCA4P4-201ENST00000435216 FKBP1AP62942 108 aaKnown RBP16.48■□□□□ 0.23
CDCA4P4-201ENST00000435216 METTL24Q5JXM2 366 aa16.48■□□□□ 0.23
CDCA4P4-201ENST00000435216 USP44Q9H0E7 712 aa16.48■□□□□ 0.23
CDCA4P4-201ENST00000435216 COL1A1P02452 1464 aaPredicted RBP16.48■□□□□ 0.23
CDCA4P4-201ENST00000435216 ARAP2Q8WZ64 1704 aa16.48■□□□□ 0.23
CDCA4P4-201ENST00000435216 MROH5Q6ZUA9 1318 aa16.47■□□□□ 0.23
CDCA4P4-201ENST00000435216 MYO1BO43795 1136 aa16.47■□□□□ 0.23
CDCA4P4-201ENST00000435216 GRIK5Q16478 980 aa16.47■□□□□ 0.23
CDCA4P4-201ENST00000435216 REM2Q8IYK8 340 aaPredicted RBP16.47■□□□□ 0.23
CDCA4P4-201ENST00000435216 SMC4Q9NTJ3 1288 aa16.47■□□□□ 0.23
CDCA4P4-201ENST00000435216 TTF2Q9UNY4 1162 aaKnown RBP16.47■□□□□ 0.23
CDCA4P4-201ENST00000435216 CHAF1AQ13111 956 aaPredicted RBP16.46■□□□□ 0.23
CDCA4P4-201ENST00000435216 LDLRAD1Q5T700 205 aa16.46■□□□□ 0.23
CDCA4P4-201ENST00000435216 NBPF12Q5TAG4 269 aaPredicted RBP16.46■□□□□ 0.23
CDCA4P4-201ENST00000435216 CLMNQ96JQ2 1002 aa16.46■□□□□ 0.23
CDCA4P4-201ENST00000435216 VPS37DQ86XT2 251 aa16.45■□□□□ 0.22
CDCA4P4-201ENST00000435216 VGLL2Q8N8G2 317 aa16.45■□□□□ 0.22
CDCA4P4-201ENST00000435216 TDRD3Q9H7E2 651 aaKnown RBP16.45■□□□□ 0.22
CDCA4P4-201ENST00000435216 PDE8BO95263 885 aa16.44■□□□□ 0.22
CDCA4P4-201ENST00000435216 TM4SF4P48230 202 aa16.44■□□□□ 0.22
CDCA4P4-201ENST00000435216 RASA3Q14644 834 aa16.44■□□□□ 0.22
CDCA4P4-201ENST00000435216 ALDH1L2Q3SY69 923 aa16.44■□□□□ 0.22
CDCA4P4-201ENST00000435216 SPRYD7Q5W111 196 aa16.44■□□□□ 0.22
CDCA4P4-201ENST00000435216 FBXO33Q7Z6M2 555 aa16.44■□□□□ 0.22
CDCA4P4-201ENST00000435216 CDAN1Q8IWY9 1227 aa16.44■□□□□ 0.22
CDCA4P4-201ENST00000435216 PPP2R3BQ9Y5P8 575 aa16.44■□□□□ 0.22
CDCA4P4-201ENST00000435216 PPP1R12BO60237 982 aaPredicted RBP16.43■□□□□ 0.22
CDCA4P4-201ENST00000435216 FRAT2O75474 233 aaPredicted RBP16.43■□□□□ 0.22
CDCA4P4-201ENST00000435216 BCAMP50895 628 aa16.43■□□□□ 0.22
CDCA4P4-201ENST00000435216 TRMT2AQ8IZ69 625 aaKnown RBP16.43■□□□□ 0.22
CDCA4P4-201ENST00000435216 ZNF296Q8WUU4 475 aaPredicted RBP16.43■□□□□ 0.22
CDCA4P4-201ENST00000435216 SLC10A4Q96EP9 437 aa16.43■□□□□ 0.22
CDCA4P4-201ENST00000435216 R3HDMLQ9H3Y0 253 aa16.43■□□□□ 0.22
CDCA4P4-201ENST00000435216 ZNF70Q9UC06 446 aaPredicted RBP16.43■□□□□ 0.22
CDCA4P4-201ENST00000435216 SERPINA10Q9UK55 444 aa16.43■□□□□ 0.22
CDCA4P4-201ENST00000435216 TCP10L2B9ZVM9 353 aa16.42■□□□□ 0.22
CDCA4P4-201ENST00000435216 CRKP46108 304 aa16.42■□□□□ 0.22
CDCA4P4-201ENST00000435216 RFX5P48382 616 aaPredicted RBP16.42■□□□□ 0.22
CDCA4P4-201ENST00000435216 SREBF2Q12772 1141 aa16.42■□□□□ 0.22
CDCA4P4-201ENST00000435216 MAP3K11Q16584 847 aa16.42■□□□□ 0.22
CDCA4P4-201ENST00000435216 SUPT20HL1Q3ZLR7 823 aa16.42■□□□□ 0.22
CDCA4P4-201ENST00000435216 SPDYE2Q495Y8 402 aa16.42■□□□□ 0.22
CDCA4P4-201ENST00000435216 CAVIN4Q5BKX8 364 aa16.42■□□□□ 0.22
CDCA4P4-201ENST00000435216 CTU1Q7Z7A3 348 aaKnown RBP16.42■□□□□ 0.22
CDCA4P4-201ENST00000435216 DZIP1LQ8IYY4 767 aaKnown RBP16.42■□□□□ 0.22
CDCA4P4-201ENST00000435216 NOB1Q9ULX3 412 aaKnown RBP16.42■□□□□ 0.22
CDCA4P4-201ENST00000435216 OTOFQ9HC10 1997 aa16.41■□□□□ 0.22
CDCA4P4-201ENST00000435216 USP2O75604 605 aaPredicted RBP16.41■□□□□ 0.22
CDCA4P4-201ENST00000435216 MLLT1Q03111 559 aaPredicted RBP16.41■□□□□ 0.22
CDCA4P4-201ENST00000435216 GPR25O00155 361 aa16.4■□□□□ 0.22
CDCA4P4-201ENST00000435216 EYA2O00167 538 aa16.4■□□□□ 0.22
CDCA4P4-201ENST00000435216 RGS19P49795 217 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms