RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 AKAP2Q9Y2D5 859 aa15.58■□□□□ 0.08
SNRNP200-202ENST00000429650 CDC25BP30305 580 aa15.58■□□□□ 0.08
SNRNP200-202ENST00000429650 FAM160A1Q05DH4 1040 aa15.58■□□□□ 0.08
SNRNP200-202ENST00000429650 GORABQ5T7V8 394 aa15.58■□□□□ 0.08
SNRNP200-202ENST00000429650 SARM1Q6SZW1 724 aa15.58■□□□□ 0.08
SNRNP200-202ENST00000429650 CLIP2Q9UDT6 1046 aa15.58■□□□□ 0.08
SNRNP200-202ENST00000429650 KINO60870 393 aaKnown RBP15.57■□□□□ 0.08
SNRNP200-202ENST00000429650 ZFYP08048 801 aaPredicted RBP15.57■□□□□ 0.08
SNRNP200-202ENST00000429650 IL2RBP14784 551 aa15.57■□□□□ 0.08
SNRNP200-202ENST00000429650 HAND2P61296 217 aa15.57■□□□□ 0.08
SNRNP200-202ENST00000429650 CHAF1AQ13111 956 aaPredicted RBP15.57■□□□□ 0.08
SNRNP200-202ENST00000429650 SCARF1Q14162 830 aa15.57■□□□□ 0.08
SNRNP200-202ENST00000429650 WASHC4Q2M389 1173 aa15.57■□□□□ 0.08
SNRNP200-202ENST00000429650 GOLGA6L19H0YKK7 550 aa15.57■□□□□ 0.08
SNRNP200-202ENST00000429650 ME1P48163 572 aa15.57■□□□□ 0.08
SNRNP200-202ENST00000429650 IMMTQ16891 758 aaKnown RBP15.57■□□□□ 0.08
SNRNP200-202ENST00000429650 FSIP1Q8NA03 581 aa15.57■□□□□ 0.08
SNRNP200-202ENST00000429650 FGAP02671 866 aa15.56■□□□□ 0.08
SNRNP200-202ENST00000429650 MYH7P12883 1935 aa15.56■□□□□ 0.08
SNRNP200-202ENST00000429650 RIOK3O14730 519 aaKnown RBP15.56■□□□□ 0.08
SNRNP200-202ENST00000429650 TRIM28Q13263 835 aaKnown RBP15.56■□□□□ 0.08
SNRNP200-202ENST00000429650 CCDC144BQ3MJ40 725 aa15.56■□□□□ 0.08
SNRNP200-202ENST00000429650 BRINP3Q76B58 766 aa15.56■□□□□ 0.08
SNRNP200-202ENST00000429650 CCDC144CPQ8IYA2 1237 aa15.56■□□□□ 0.08
SNRNP200-202ENST00000429650 MB21D2Q8IYB1 491 aaPredicted RBP15.56■□□□□ 0.08
SNRNP200-202ENST00000429650 APPBP2Q92624 585 aa15.56■□□□□ 0.08
SNRNP200-202ENST00000429650 CCDC85AQ96PX6 553 aaPredicted RBP15.56■□□□□ 0.08
SNRNP200-202ENST00000429650 RTEL1Q9NZ71 1219 aa15.56■□□□□ 0.08
SNRNP200-202ENST00000429650 DDX60Q8IY21 1712 aaKnown RBP15.56■□□□□ 0.08
SNRNP200-202ENST00000429650 PCCAP05165 728 aaPredicted RBP15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 ZAP70P43403 619 aa15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 CACTINQ8WUQ7 758 aaKnown RBP15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 PLA2G12BQ9BX93 195 aa15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 PCDHA7Q9UN72 937 aa15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 ZNF330Q9Y3S2 320 aaPredicted RBP15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 TOGARAM1Q9Y4F4 1720 aa15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 FAM177BA6PVY3 158 aa15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 PRC1O43663 620 aa15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 HSPA2P54652 639 aa15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 FAM89AQ96GI7 184 aa15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 CARD10Q9BWT7 1032 aa15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 PUS7LQ9H0K6 701 aaKnown RBP15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 ABCC12Q96J65 1359 aa15.55■□□□□ 0.08
SNRNP200-202ENST00000429650 CSF1RP07333 972 aa15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 HSP90AB3PQ58FF7 597 aa15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 OTUD7BQ6GQQ9 843 aa15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 FMR1NBQ8N0W7 255 aaPredicted RBP15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 MRPS27Q92552 414 aaKnown RBP15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 MRFAP1L1Q96HT8 127 aa15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 BCL2L12Q9HB09 334 aa15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 ANO10Q9NW15 660 aa15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 HPS5Q9UPZ3 1129 aa15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 A0A087WWV3 80 aa15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 KLF18A0A0U1RQI7 1052 aa15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 ANTXR2P58335 489 aa15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 IFIT5Q13325 482 aaKnown RBP15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 ADALQ6DHV7 355 aa15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 PI16Q6UXB8 463 aa15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 DHX40Q8IX18 779 aaKnown RBP15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 RIC1Q4ADV7 1423 aa15.54■□□□□ 0.08
SNRNP200-202ENST00000429650 GOLGA8BA8MQT2 603 aa15.53■□□□□ 0.08
SNRNP200-202ENST00000429650 ZBTB38Q8NAP3 1195 aaPredicted RBP15.53■□□□□ 0.08
SNRNP200-202ENST00000429650 LINC00301Q8NCQ3 95 aa15.53■□□□□ 0.08
SNRNP200-202ENST00000429650 C8orf76Q96K31 380 aa15.53■□□□□ 0.08
SNRNP200-202ENST00000429650 ARID3AQ99856 593 aa15.53■□□□□ 0.08
SNRNP200-202ENST00000429650 XIRP1Q702N8 1843 aaKnown RBP15.53■□□□□ 0.08
SNRNP200-202ENST00000429650 A0A1W2PQ27 194 aa15.53■□□□□ 0.08
SNRNP200-202ENST00000429650 A0A1W2PQ64 194 aa15.53■□□□□ 0.08
SNRNP200-202ENST00000429650 A0A1W2PQD8 194 aa15.53■□□□□ 0.08
SNRNP200-202ENST00000429650 BECN2A8MW95 431 aa15.53■□□□□ 0.08
SNRNP200-202ENST00000429650 DHX16O60231 1041 aaKnown RBP15.53■□□□□ 0.08
SNRNP200-202ENST00000429650 NCOA7Q8NI08 942 aa15.53■□□□□ 0.08
SNRNP200-202ENST00000429650 AKAP11Q9UKA4 1901 aa15.53■□□□□ 0.08
SNRNP200-202ENST00000429650 GPAA1O43292 621 aa15.52■□□□□ 0.08
SNRNP200-202ENST00000429650 KIF6Q6ZMV9 814 aa15.52■□□□□ 0.08
SNRNP200-202ENST00000429650 FBXO18Q8NFZ0 1043 aa15.52■□□□□ 0.08
SNRNP200-202ENST00000429650 C16orf45Q96MC5 204 aaPredicted RBP15.52■□□□□ 0.08
SNRNP200-202ENST00000429650 TMOD3Q9NYL9 352 aa15.52■□□□□ 0.08
SNRNP200-202ENST00000429650 ORC3Q9UBD5 711 aaPredicted RBP15.52■□□□□ 0.08
SNRNP200-202ENST00000429650 CLIC4Q9Y696 253 aa15.52■□□□□ 0.08
SNRNP200-202ENST00000429650 CEP57L1Q8IYX8 460 aa15.52■□□□□ 0.07
SNRNP200-202ENST00000429650 ERCC4Q92889 916 aaPredicted RBP15.52■□□□□ 0.07
SNRNP200-202ENST00000429650 A0A1B0GVL5 298 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 POLR3DP05423 398 aaPredicted RBP15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 STK38Q15208 465 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 ATP2B3Q16720 1220 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 RALYLQ86SE5 291 aaKnown RBP15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 LRRC8AQ8IWT6 810 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 DNAJC10Q8IXB1 793 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 CCDC94Q9BW85 323 aaPredicted RBP15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 POLR3EQ9NVU0 708 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 RIPOR2Q9Y4F9 1068 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 ZNF213O14771 459 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 CTIFO43310 598 aaKnown RBP15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 YEATS4O95619 227 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 MCAMP43121 646 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 NDUFA8P51970 172 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 RAB11FIP4Q86YS3 637 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 SYNE4Q8N205 404 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms