RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 NF2P35240 595 aa12.96□□□□□ -0.33
ZNF3-208ENST00000428683 GYG1P46976 350 aa12.96□□□□□ -0.33
ZNF3-208ENST00000428683 MMP14P50281 582 aa12.96□□□□□ -0.33
ZNF3-208ENST00000428683 FKBP1BP68106 108 aa12.96□□□□□ -0.33
ZNF3-208ENST00000428683 RASAL3Q86YV0 1011 aa12.96□□□□□ -0.33
ZNF3-208ENST00000428683 HIBADHP31937 336 aaKnown RBP12.95□□□□□ -0.34
ZNF3-208ENST00000428683 RBM5P52756 815 aaKnown RBP eCLIP12.95□□□□□ -0.34
ZNF3-208ENST00000428683 MKRN3Q13064 507 aaKnown RBP12.95□□□□□ -0.34
ZNF3-208ENST00000428683 UBE4AQ14139 1066 aa12.95□□□□□ -0.34
ZNF3-208ENST00000428683 CFAP100Q494V2 611 aa12.95□□□□□ -0.34
ZNF3-208ENST00000428683 LRRC24Q50LG9 513 aa12.95□□□□□ -0.34
ZNF3-208ENST00000428683 ZBED3Q96IU2 234 aaPredicted RBP12.95□□□□□ -0.34
ZNF3-208ENST00000428683 FZD1Q9UP38 647 aa12.95□□□□□ -0.34
ZNF3-208ENST00000428683 RIPOR2Q9Y4F9 1068 aa12.95□□□□□ -0.34
ZNF3-208ENST00000428683 THSD7BQ9C0I4 1608 aa12.95□□□□□ -0.34
ZNF3-208ENST00000428683 UTYO14607 1347 aa12.94□□□□□ -0.34
ZNF3-208ENST00000428683 PTPRCP08575 1304 aa12.94□□□□□ -0.34
ZNF3-208ENST00000428683 CLRN2A0PK11 232 aa12.94□□□□□ -0.34
ZNF3-208ENST00000428683 DGKZQ13574 1117 aa12.94□□□□□ -0.34
ZNF3-208ENST00000428683 APOBEC3FQ8IUX4 373 aaKnown RBP12.94□□□□□ -0.34
ZNF3-208ENST00000428683 ANKRD44Q8N8A2 993 aa12.94□□□□□ -0.34
ZNF3-208ENST00000428683 KLHDC4Q8TBB5 520 aa12.94□□□□□ -0.34
ZNF3-208ENST00000428683 FAM84BQ96KN1 310 aaPredicted RBP12.94□□□□□ -0.34
ZNF3-208ENST00000428683 PRMT6Q96LA8 375 aaPredicted RBP12.94□□□□□ -0.34
ZNF3-208ENST00000428683 MCOLN1Q9GZU1 580 aa12.94□□□□□ -0.34
ZNF3-208ENST00000428683 USP44Q9H0E7 712 aa12.94□□□□□ -0.34
ZNF3-208ENST00000428683 IQSEC3Q9UPP2 1182 aaPredicted RBP12.94□□□□□ -0.34
ZNF3-208ENST00000428683 CACNA1FO60840 1977 aa12.94□□□□□ -0.34
ZNF3-208ENST00000428683 PTPN12Q05209 780 aaKnown RBP12.93□□□□□ -0.34
ZNF3-208ENST00000428683 RABL6Q3YEC7 729 aaPredicted RBP12.93□□□□□ -0.34
ZNF3-208ENST00000428683 METTL24Q5JXM2 366 aa12.93□□□□□ -0.34
ZNF3-208ENST00000428683 ARMC9Q7Z3E5 817 aa12.93□□□□□ -0.34
ZNF3-208ENST00000428683 TDRD7Q8NHU6 1098 aaKnown RBP12.93□□□□□ -0.34
ZNF3-208ENST00000428683 DEFB129Q9H1M3 183 aa12.93□□□□□ -0.34
ZNF3-208ENST00000428683 VEZTQ9HBM0 779 aa12.93□□□□□ -0.34
ZNF3-208ENST00000428683 SMC4Q9NTJ3 1288 aa12.93□□□□□ -0.34
ZNF3-208ENST00000428683 ANGEL1Q9UNK9 670 aaKnown RBP12.93□□□□□ -0.34
ZNF3-208ENST00000428683 AOX1Q06278 1338 aa12.92□□□□□ -0.34
ZNF3-208ENST00000428683 MROH5Q6ZUA9 1318 aa12.92□□□□□ -0.34
ZNF3-208ENST00000428683 MYO1BO43795 1136 aa12.92□□□□□ -0.34
ZNF3-208ENST00000428683 FKBP1AP62942 108 aaKnown RBP12.92□□□□□ -0.34
ZNF3-208ENST00000428683 ALDH1L2Q3SY69 923 aa12.92□□□□□ -0.34
ZNF3-208ENST00000428683 MFSD14BQ5SR56 506 aa12.92□□□□□ -0.34
ZNF3-208ENST00000428683 VPS37DQ86XT2 251 aa12.92□□□□□ -0.34
ZNF3-208ENST00000428683 MTMR14Q8NCE2 650 aa12.92□□□□□ -0.34
ZNF3-208ENST00000428683 SAGE1Q9NXZ1 904 aa12.92□□□□□ -0.34
ZNF3-208ENST00000428683 PSME4Q14997 1843 aa12.92□□□□□ -0.34
ZNF3-208ENST00000428683 FAM205AQ6ZU69 1335 aa12.91□□□□□ -0.34
ZNF3-208ENST00000428683 SPDYE2BA6NHP3 402 aa12.91□□□□□ -0.34
ZNF3-208ENST00000428683 FRAT2O75474 233 aaPredicted RBP12.91□□□□□ -0.34
ZNF3-208ENST00000428683 TBC1D8O95759 1140 aa12.91□□□□□ -0.34
ZNF3-208ENST00000428683 SPDYE6P0CI01 402 aa12.91□□□□□ -0.34
ZNF3-208ENST00000428683 CHAF1AQ13111 956 aaPredicted RBP12.91□□□□□ -0.34
ZNF3-208ENST00000428683 REM2Q8IYK8 340 aaPredicted RBP12.91□□□□□ -0.34
ZNF3-208ENST00000428683 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
ZNF3-208ENST00000428683 NOB1Q9ULX3 412 aaKnown RBP12.91□□□□□ -0.34
ZNF3-208ENST00000428683 TTF2Q9UNY4 1162 aaKnown RBP12.91□□□□□ -0.34
ZNF3-208ENST00000428683 PDE8BO95263 885 aa12.9□□□□□ -0.34
ZNF3-208ENST00000428683 BCAMP50895 628 aa12.9□□□□□ -0.34
ZNF3-208ENST00000428683 CAVIN4Q5BKX8 364 aa12.9□□□□□ -0.34
ZNF3-208ENST00000428683 NBPF12Q5TAG4 269 aaPredicted RBP12.9□□□□□ -0.34
ZNF3-208ENST00000428683 FBXO33Q7Z6M2 555 aa12.9□□□□□ -0.34
ZNF3-208ENST00000428683 TDRD3Q9H7E2 651 aaKnown RBP12.9□□□□□ -0.34
ZNF3-208ENST00000428683 CASP8AP2Q9UKL3 1982 aa12.89□□□□□ -0.35
ZNF3-208ENST00000428683 RASA3Q14644 834 aa12.89□□□□□ -0.35
ZNF3-208ENST00000428683 GRIK5Q16478 980 aa12.89□□□□□ -0.35
ZNF3-208ENST00000428683 LDLRAD1Q5T700 205 aa12.89□□□□□ -0.35
ZNF3-208ENST00000428683 SLC10A4Q96EP9 437 aa12.89□□□□□ -0.35
ZNF3-208ENST00000428683 CCER2I3L3R5 266 aa12.88□□□□□ -0.35
ZNF3-208ENST00000428683 PPP1R12BO60237 982 aaPredicted RBP12.88□□□□□ -0.35
ZNF3-208ENST00000428683 CRKP46108 304 aa12.88□□□□□ -0.35
ZNF3-208ENST00000428683 TM4SF4P48230 202 aa12.88□□□□□ -0.35
ZNF3-208ENST00000428683 SUPT20HL1Q3ZLR7 823 aa12.88□□□□□ -0.35
ZNF3-208ENST00000428683 ZNF70Q9UC06 446 aaPredicted RBP12.88□□□□□ -0.35
ZNF3-208ENST00000428683 PAPPA2Q9BXP8 1791 aa12.88□□□□□ -0.35
ZNF3-208ENST00000428683 TCP10L2B9ZVM9 353 aa12.87□□□□□ -0.35
ZNF3-208ENST00000428683 EYA2O00167 538 aa12.87□□□□□ -0.35
ZNF3-208ENST00000428683 USP2O75604 605 aaPredicted RBP12.87□□□□□ -0.35
ZNF3-208ENST00000428683 RFX5P48382 616 aaPredicted RBP12.87□□□□□ -0.35
ZNF3-208ENST00000428683 SPRYD7Q5W111 196 aa12.87□□□□□ -0.35
ZNF3-208ENST00000428683 DZIP1LQ8IYY4 767 aaKnown RBP12.87□□□□□ -0.35
ZNF3-208ENST00000428683 VGLL2Q8N8G2 317 aa12.87□□□□□ -0.35
ZNF3-208ENST00000428683 CLMNQ96JQ2 1002 aa12.87□□□□□ -0.35
ZNF3-208ENST00000428683 SIL1Q9H173 461 aa12.87□□□□□ -0.35
ZNF3-208ENST00000428683 SERPINA10Q9UK55 444 aa12.87□□□□□ -0.35
ZNF3-208ENST00000428683 PPP2R3BQ9Y5P8 575 aa12.87□□□□□ -0.35
ZNF3-208ENST00000428683 ZNF646O15015 1829 aaPredicted RBP12.87□□□□□ -0.35
ZNF3-208ENST00000428683 IFIT1P09914 478 aaKnown RBP12.86□□□□□ -0.35
ZNF3-208ENST00000428683 UBTFL1P0CB47 393 aaPredicted RBP12.86□□□□□ -0.35
ZNF3-208ENST00000428683 SREBF2Q12772 1141 aa12.86□□□□□ -0.35
ZNF3-208ENST00000428683 SPDYE2Q495Y8 402 aa12.86□□□□□ -0.35
ZNF3-208ENST00000428683 API5Q9BZZ5 524 aaKnown RBP12.86□□□□□ -0.35
ZNF3-208ENST00000428683 CT47B1P0C2W7 299 aaPredicted RBP12.85□□□□□ -0.35
ZNF3-208ENST00000428683 FGFR2P21802 821 aa12.85□□□□□ -0.35
ZNF3-208ENST00000428683 CACNB3P54284 484 aa12.85□□□□□ -0.35
ZNF3-208ENST00000428683 PUM3Q15397 648 aaKnown RBP12.85□□□□□ -0.35
ZNF3-208ENST00000428683 MAP3K11Q16584 847 aa12.85□□□□□ -0.35
ZNF3-208ENST00000428683 ATG9AQ7Z3C6 839 aa12.85□□□□□ -0.35
ZNF3-208ENST00000428683 CTU1Q7Z7A3 348 aaKnown RBP12.85□□□□□ -0.35
ZNF3-208ENST00000428683 CDAN1Q8IWY9 1227 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms