RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 SASH1O94885 1247 aa11.38□□□□□ -0.59
CMSS1-201ENST00000421999 TSPY3P0CV98 308 aa11.38□□□□□ -0.59
CMSS1-201ENST00000421999 TSPY8P0CW00 308 aa11.38□□□□□ -0.59
CMSS1-201ENST00000421999 EIF5P55010 431 aaKnown RBP11.38□□□□□ -0.59
CMSS1-201ENST00000421999 GUCY1B3Q02153 619 aa11.38□□□□□ -0.59
CMSS1-201ENST00000421999 KBTBD3Q8NAB2 608 aa11.38□□□□□ -0.59
CMSS1-201ENST00000421999 CAMTA1Q9Y6Y1 1673 aa11.37□□□□□ -0.59
CMSS1-201ENST00000421999 ADORA1P30542 326 aa11.37□□□□□ -0.59
CMSS1-201ENST00000421999 BCAMP50895 628 aa11.37□□□□□ -0.59
CMSS1-201ENST00000421999 EN1Q05925 392 aaPredicted RBP11.37□□□□□ -0.59
CMSS1-201ENST00000421999 TBC1D9BQ66K14 1250 aa11.37□□□□□ -0.59
CMSS1-201ENST00000421999 ARHGAP27Q6ZUM4 889 aa11.37□□□□□ -0.59
CMSS1-201ENST00000421999 ISCA1Q9BUE6 129 aa11.37□□□□□ -0.59
CMSS1-201ENST00000421999 DEKP35659 375 aaKnown RBP11.37□□□□□ -0.59
CMSS1-201ENST00000421999 POLA2Q14181 598 aa11.37□□□□□ -0.59
CMSS1-201ENST00000421999 TRMT1LQ7Z2T5 733 aaKnown RBP11.37□□□□□ -0.59
CMSS1-201ENST00000421999 LINC00116Q8NCU8 138 aa11.37□□□□□ -0.59
CMSS1-201ENST00000421999 NCOA7Q8NI08 942 aa11.37□□□□□ -0.59
CMSS1-201ENST00000421999 DENND2AQ9ULE3 1009 aa11.37□□□□□ -0.59
CMSS1-201ENST00000421999 LIMCH1Q9UPQ0 1083 aa11.37□□□□□ -0.59
CMSS1-201ENST00000421999 NALCNQ8IZF0 1738 aa11.37□□□□□ -0.59
CMSS1-201ENST00000421999 PLCG2P16885 1265 aa11.37□□□□□ -0.59
CMSS1-201ENST00000421999 USP26Q9BXU7 913 aa11.37□□□□□ -0.59
CMSS1-201ENST00000421999 PRPF40AO75400 957 aaKnown RBP11.36□□□□□ -0.59
CMSS1-201ENST00000421999 MMP10P09238 476 aa11.36□□□□□ -0.59
CMSS1-201ENST00000421999 KRT85P78386 507 aa11.36□□□□□ -0.59
CMSS1-201ENST00000421999 NIM1KQ8IY84 436 aa11.36□□□□□ -0.59
CMSS1-201ENST00000421999 AOX1Q06278 1338 aa11.36□□□□□ -0.59
CMSS1-201ENST00000421999 WDR33Q9C0J8 1336 aaKnown RBP11.36□□□□□ -0.59
CMSS1-201ENST00000421999 CCDC102BQ68D86 513 aa11.36□□□□□ -0.59
CMSS1-201ENST00000421999 HMG20BQ9P0W2 317 aa11.36□□□□□ -0.59
CMSS1-201ENST00000421999 IPO7O95373 1038 aaKnown RBP11.36□□□□□ -0.59
CMSS1-201ENST00000421999 FNBP4Q8N3X1 1017 aaPredicted RBP11.36□□□□□ -0.59
CMSS1-201ENST00000421999 SPATA5Q8NB90 893 aa11.36□□□□□ -0.59
CMSS1-201ENST00000421999 SNAP23O00161 211 aa11.36□□□□□ -0.59
CMSS1-201ENST00000421999 MBD4O95243 580 aa11.36□□□□□ -0.59
CMSS1-201ENST00000421999 PHKA1P46020 1223 aa11.36□□□□□ -0.59
CMSS1-201ENST00000421999 ESR2Q92731 530 aa11.36□□□□□ -0.59
CMSS1-201ENST00000421999 SGSM2O43147 1006 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 KIF5BP33176 963 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 EPS15P42566 896 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 BRF1Q92994 677 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 CUL5Q93034 780 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 CCDC171Q6TFL3 1326 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 CREB3L3Q68CJ9 461 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 WWC2Q6AWC2 1192 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 OLFM4Q6UX06 510 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 CHST3Q7LGC8 479 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 TEX11Q8IYF3 940 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 C8orf76Q96K31 380 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 FBXO3Q9UK99 471 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 PIK3C2AO00443 1686 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 CPA1P15085 419 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 PRKG1Q13976 671 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 SLC27A3Q5K4L6 730 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 CNKSR1Q969H4 720 aa11.35□□□□□ -0.59
CMSS1-201ENST00000421999 NAP1L5Q96NT1 182 aaPredicted RBP11.35□□□□□ -0.59
CMSS1-201ENST00000421999 TNNI2P48788 182 aa11.34□□□□□ -0.59
CMSS1-201ENST00000421999 NLRP5P59047 1200 aa11.34□□□□□ -0.59
CMSS1-201ENST00000421999 SUPT20HQ8NEM7 779 aa11.34□□□□□ -0.59
CMSS1-201ENST00000421999 MON2Q7Z3U7 1717 aa11.34□□□□□ -0.59
CMSS1-201ENST00000421999 TRIM28Q13263 835 aaKnown RBP11.34□□□□□ -0.59
CMSS1-201ENST00000421999 MTX1Q13505 466 aa11.34□□□□□ -0.59
CMSS1-201ENST00000421999 CIAO1O76071 339 aa11.34□□□□□ -0.59
CMSS1-201ENST00000421999 GTF2IP78347 998 aa11.34□□□□□ -0.59
CMSS1-201ENST00000421999 WTAPQ15007 396 aa11.34□□□□□ -0.59
CMSS1-201ENST00000421999 APPBP2Q92624 585 aa11.34□□□□□ -0.59
CMSS1-201ENST00000421999 SEC62Q99442 399 aaKnown RBP11.34□□□□□ -0.59
CMSS1-201ENST00000421999 CCDC194A0A1B0GVG4 234 aa11.34□□□□□ -0.59
CMSS1-201ENST00000421999 MCM5P33992 734 aa11.34□□□□□ -0.59
CMSS1-201ENST00000421999 NECAB1Q8N987 351 aa11.34□□□□□ -0.59
CMSS1-201ENST00000421999 ARMT1Q9H993 441 aa11.34□□□□□ -0.59
CMSS1-201ENST00000421999 BMP2KQ9NSY1 1161 aaPredicted RBP11.34□□□□□ -0.59
CMSS1-201ENST00000421999 ZNF142P52746 1687 aaPredicted RBP11.33□□□□□ -0.59
CMSS1-201ENST00000421999 GPAA1O43292 621 aa11.33□□□□□ -0.6
CMSS1-201ENST00000421999 IARSP41252 1262 aaKnown RBP11.33□□□□□ -0.6
CMSS1-201ENST00000421999 ANAPC15P60006 121 aa11.33□□□□□ -0.6
CMSS1-201ENST00000421999 EAPPQ56P03 285 aaPredicted RBP11.33□□□□□ -0.6
CMSS1-201ENST00000421999 PI16Q6UXB8 463 aa11.33□□□□□ -0.6
CMSS1-201ENST00000421999 STAP2Q9UGK3 403 aa11.33□□□□□ -0.6
CMSS1-201ENST00000421999 OFD1O75665 1012 aa11.33□□□□□ -0.6
CMSS1-201ENST00000421999 TNIP1Q15025 636 aa11.33□□□□□ -0.6
CMSS1-201ENST00000421999 RNF214Q8ND24 703 aa11.33□□□□□ -0.6
CMSS1-201ENST00000421999 WDR66Q8TBY9 1149 aa11.33□□□□□ -0.6
CMSS1-201ENST00000421999 SH2B1Q9NRF2 756 aaPredicted RBP11.33□□□□□ -0.6
CMSS1-201ENST00000421999 HELLSQ9NRZ9 838 aa11.33□□□□□ -0.6
CMSS1-201ENST00000421999 ZBTB7AO95365 584 aa11.33□□□□□ -0.6
CMSS1-201ENST00000421999 DHX8Q14562 1220 aaKnown RBP11.33□□□□□ -0.6
CMSS1-201ENST00000421999 NFIXQ14938 502 aa11.33□□□□□ -0.6
CMSS1-201ENST00000421999 TMX3Q96JJ7 454 aa11.33□□□□□ -0.6
CMSS1-201ENST00000421999 FAM13BQ9NYF5 915 aa11.33□□□□□ -0.6
CMSS1-201ENST00000421999 RAD50Q92878 1312 aa11.32□□□□□ -0.6
CMSS1-201ENST00000421999 ZNF532Q9HCE3 1301 aa11.32□□□□□ -0.6
CMSS1-201ENST00000421999 METAP2P50579 478 aaKnown RBP eCLIP11.32□□□□□ -0.6
CMSS1-201ENST00000421999 IFIT1BQ5T764 474 aaKnown RBP11.32□□□□□ -0.6
CMSS1-201ENST00000421999 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
CMSS1-201ENST00000421999 TTC6Q86TZ1 520 aa11.32□□□□□ -0.6
CMSS1-201ENST00000421999 A0A0D9SFI3 127 aa11.32□□□□□ -0.6
CMSS1-201ENST00000421999 CAMTA2O94983 1202 aa11.32□□□□□ -0.6
CMSS1-201ENST00000421999 ADRA2BP18089 450 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms