RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 UBE3CQ15386 1083 aa22.35■■□□□ 1.17
CROCCP3-202ENST00000420820 PUM3Q15397 648 aaKnown RBP22.35■■□□□ 1.17
CROCCP3-202ENST00000420820 CCDC102BQ68D86 513 aa22.35■■□□□ 1.17
CROCCP3-202ENST00000420820 NAA16Q6N069 864 aaPredicted RBP22.35■■□□□ 1.17
CROCCP3-202ENST00000420820 LPIN2Q92539 896 aa22.35■■□□□ 1.17
CROCCP3-202ENST00000420820 RTL9Q8NET4 1388 aa22.34■■□□□ 1.17
CROCCP3-202ENST00000420820 BCORQ6W2J9 1755 aa22.34■■□□□ 1.17
CROCCP3-202ENST00000420820 UQCRFS1P1P0C7P4 283 aa22.34■■□□□ 1.17
CROCCP3-202ENST00000420820 PARP10Q53GL7 1025 aa22.34■■□□□ 1.17
CROCCP3-202ENST00000420820 MB21D2Q8IYB1 491 aaPredicted RBP22.34■■□□□ 1.17
CROCCP3-202ENST00000420820 LEO1Q8WVC0 666 aaPredicted RBP22.34■■□□□ 1.17
CROCCP3-202ENST00000420820 PIH1D3Q9NQM4 214 aaKnown RBP22.34■■□□□ 1.17
CROCCP3-202ENST00000420820 PHKA1P46020 1223 aa22.33■■□□□ 1.17
CROCCP3-202ENST00000420820 CHMP4CQ96CF2 233 aa22.33■■□□□ 1.17
CROCCP3-202ENST00000420820 DDX11Q96FC9 970 aa22.33■■□□□ 1.17
CROCCP3-202ENST00000420820 ACSBG1Q96GR2 724 aa22.33■■□□□ 1.17
CROCCP3-202ENST00000420820 UTP14AQ9BVJ6 771 aaKnown RBP22.33■■□□□ 1.17
CROCCP3-202ENST00000420820 WDR19Q8NEZ3 1342 aa22.33■■□□□ 1.17
CROCCP3-202ENST00000420820 PTPDC1A2A3K4 754 aa22.33■■□□□ 1.16
CROCCP3-202ENST00000420820 SPATA32Q96LK8 384 aa22.32■■□□□ 1.16
CROCCP3-202ENST00000420820 TCRBV5S4A2TA0A5A2 114 aa22.31■■□□□ 1.16
CROCCP3-202ENST00000420820 HCLS1P14317 486 aaPredicted RBP22.31■■□□□ 1.16
CROCCP3-202ENST00000420820 CHST3Q7LGC8 479 aa22.31■■□□□ 1.16
CROCCP3-202ENST00000420820 TFIP11Q9UBB9 837 aaKnown RBP22.31■■□□□ 1.16
CROCCP3-202ENST00000420820 H3BQV1 296 aa22.31■■□□□ 1.16
CROCCP3-202ENST00000420820 NTSR2O95665 410 aa22.31■■□□□ 1.16
CROCCP3-202ENST00000420820 ADD1P35611 737 aaKnown RBP22.31■■□□□ 1.16
CROCCP3-202ENST00000420820 SLC9C2Q5TAH2 1124 aa22.31■■□□□ 1.16
CROCCP3-202ENST00000420820 IFFO2Q5TF58 517 aa22.31■■□□□ 1.16
CROCCP3-202ENST00000420820 GIMAP6Q6P9H5 292 aa22.31■■□□□ 1.16
CROCCP3-202ENST00000420820 NOL7Q9UMY1 257 aaKnown RBP22.31■■□□□ 1.16
CROCCP3-202ENST00000420820 LIG1P18858 919 aa22.3■■□□□ 1.16
CROCCP3-202ENST00000420820 MCM5P33992 734 aa22.3■■□□□ 1.16
CROCCP3-202ENST00000420820 ANTXR2P58335 489 aa22.3■■□□□ 1.16
CROCCP3-202ENST00000420820 HAND2P61296 217 aa22.3■■□□□ 1.16
CROCCP3-202ENST00000420820 CCT2P78371 535 aaKnown RBP22.3■■□□□ 1.16
CROCCP3-202ENST00000420820 NBPF3Q9H094 633 aa22.3■■□□□ 1.16
CROCCP3-202ENST00000420820 NCOA5Q9HCD5 579 aaKnown RBP22.3■■□□□ 1.16
CROCCP3-202ENST00000420820 KIF3AQ9Y496 699 aa22.3■■□□□ 1.16
CROCCP3-202ENST00000420820 NCOA7Q8NI08 942 aa22.29■■□□□ 1.16
CROCCP3-202ENST00000420820 ZNF213O14771 459 aa22.29■■□□□ 1.16
CROCCP3-202ENST00000420820 PDE6AP16499 860 aa22.29■■□□□ 1.16
CROCCP3-202ENST00000420820 SMARCC1Q92922 1105 aaPredicted RBP22.29■■□□□ 1.16
CROCCP3-202ENST00000420820 PGBD1Q96JS3 809 aa22.29■■□□□ 1.16
CROCCP3-202ENST00000420820 GPHNQ9NQX3 736 aaPredicted RBP22.29■■□□□ 1.16
CROCCP3-202ENST00000420820 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.29■■□□□ 1.16
CROCCP3-202ENST00000420820 PRC1O43663 620 aa22.28■■□□□ 1.16
CROCCP3-202ENST00000420820 SLC5A1P13866 664 aa22.28■■□□□ 1.16
CROCCP3-202ENST00000420820 TPRNQ4KMQ1 711 aa22.28■■□□□ 1.16
CROCCP3-202ENST00000420820 HELBQ8NG08 1087 aaPredicted RBP22.28■■□□□ 1.16
CROCCP3-202ENST00000420820 SEC31BQ9NQW1 1179 aa22.28■■□□□ 1.16
CROCCP3-202ENST00000420820 ZNF532Q9HCE3 1301 aa22.28■■□□□ 1.16
CROCCP3-202ENST00000420820 FDPSP14324 419 aaKnown RBP22.27■■□□□ 1.16
CROCCP3-202ENST00000420820 RBM43Q6ZSC3 357 aaKnown RBP22.27■■□□□ 1.16
CROCCP3-202ENST00000420820 CFAP45Q9UL16 551 aa22.27■■□□□ 1.16
CROCCP3-202ENST00000420820 CARMIL3Q8ND23 1372 aa22.27■■□□□ 1.16
CROCCP3-202ENST00000420820 CCDC152Q4G0S7 254 aa22.27■■□□□ 1.16
CROCCP3-202ENST00000420820 WWC3Q9ULE0 1092 aa22.27■■□□□ 1.16
CROCCP3-202ENST00000420820 HPS5Q9UPZ3 1129 aa22.27■■□□□ 1.16
CROCCP3-202ENST00000420820 C4AP0C0L4 1744 aa22.26■■□□□ 1.15
CROCCP3-202ENST00000420820 C4BP0C0L5 1744 aa22.26■■□□□ 1.15
CROCCP3-202ENST00000420820 ZMYM6O95789 1325 aa22.26■■□□□ 1.15
CROCCP3-202ENST00000420820 IDH1O75874 414 aaKnown RBP22.26■■□□□ 1.15
CROCCP3-202ENST00000420820 ALX1Q15699 326 aa22.26■■□□□ 1.15
CROCCP3-202ENST00000420820 ATL3Q6DD88 541 aa22.26■■□□□ 1.15
CROCCP3-202ENST00000420820 SPATA5Q8NB90 893 aa22.26■■□□□ 1.15
CROCCP3-202ENST00000420820 HSPA1LP34931 641 aa22.25■■□□□ 1.15
CROCCP3-202ENST00000420820 STRBPQ96SI9 672 aaKnown RBP22.25■■□□□ 1.15
CROCCP3-202ENST00000420820 MPHOSPH8Q99549 860 aa22.25■■□□□ 1.15
CROCCP3-202ENST00000420820 NUP62CLQ9H1M0 184 aa22.25■■□□□ 1.15
CROCCP3-202ENST00000420820 DDX19AQ9NUU7 478 aaKnown RBP22.25■■□□□ 1.15
CROCCP3-202ENST00000420820 CCDC39Q9UFE4 941 aa22.25■■□□□ 1.15
CROCCP3-202ENST00000420820 RCOR1Q9UKL0 485 aa22.25■■□□□ 1.15
CROCCP3-202ENST00000420820 NIP7Q9Y221 180 aaKnown RBP eCLIP22.25■■□□□ 1.15
CROCCP3-202ENST00000420820 BCL9LQ86UU0 1499 aa22.25■■□□□ 1.15
CROCCP3-202ENST00000420820 A0A1B0GUL6 1792 aa22.25■■□□□ 1.15
CROCCP3-202ENST00000420820 RASGRF1Q13972 1273 aa22.25■■□□□ 1.15
CROCCP3-202ENST00000420820 CASZ1Q86V15 1759 aa22.25■■□□□ 1.15
CROCCP3-202ENST00000420820 KCNQ2O43526 872 aa22.24■■□□□ 1.15
CROCCP3-202ENST00000420820 CLEC4GQ6UXB4 293 aa22.24■■□□□ 1.15
CROCCP3-202ENST00000420820 DACT1Q9NYF0 836 aa22.24■■□□□ 1.15
CROCCP3-202ENST00000420820 COL4A1P02462 1669 aa22.24■■□□□ 1.15
CROCCP3-202ENST00000420820 CCDC192P0DO97 292 aa22.23■■□□□ 1.15
CROCCP3-202ENST00000420820 MAP3K11Q16584 847 aa22.23■■□□□ 1.15
CROCCP3-202ENST00000420820 RALYLQ86SE5 291 aaKnown RBP22.23■■□□□ 1.15
CROCCP3-202ENST00000420820 TBC1D10CQ8IV04 446 aa22.23■■□□□ 1.15
CROCCP3-202ENST00000420820 KLF18A0A0U1RQI7 1052 aa22.23■■□□□ 1.15
CROCCP3-202ENST00000420820 GOLGA6L4A6NEF3 574 aa22.23■■□□□ 1.15
CROCCP3-202ENST00000420820 FAM177BA6PVY3 158 aa22.23■■□□□ 1.15
CROCCP3-202ENST00000420820 ILDR1Q86SU0 546 aaPredicted RBP22.23■■□□□ 1.15
CROCCP3-202ENST00000420820 RGS22Q8NE09 1264 aa22.23■■□□□ 1.15
CROCCP3-202ENST00000420820 CLSTN2Q9H4D0 955 aa22.23■■□□□ 1.15
CROCCP3-202ENST00000420820 ZKSCAN5Q9Y2L8 839 aa22.23■■□□□ 1.15
CROCCP3-202ENST00000420820 CHD4Q14839 1912 aa22.22■■□□□ 1.15
CROCCP3-202ENST00000420820 A0A0G2JS52 829 aa22.22■■□□□ 1.15
CROCCP3-202ENST00000420820 SNAP23O00161 211 aa22.22■■□□□ 1.15
CROCCP3-202ENST00000420820 DHX16O60231 1041 aaKnown RBP22.22■■□□□ 1.15
CROCCP3-202ENST00000420820 ZNF500O60304 480 aaPredicted RBP22.22■■□□□ 1.15
CROCCP3-202ENST00000420820 MSNP26038 577 aaKnown RBP22.22■■□□□ 1.15
CROCCP3-202ENST00000420820 TIAM2Q8IVF5 1701 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms