RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 CRKLP46109 303 aaKnown RBP19.05■□□□□ 0.64
CTSB-203ENST00000420692 DDB1Q16531 1140 aa19.05■□□□□ 0.64
CTSB-203ENST00000420692 IMMTQ16891 758 aaKnown RBP19.05■□□□□ 0.64
CTSB-203ENST00000420692 NAA16Q6N069 864 aaPredicted RBP19.05■□□□□ 0.64
CTSB-203ENST00000420692 CCDC87Q9NVE4 849 aa19.05■□□□□ 0.64
CTSB-203ENST00000420692 DACT1Q9NYF0 836 aa19.05■□□□□ 0.64
CTSB-203ENST00000420692 CAMK4Q16566 473 aa19.04■□□□□ 0.64
CTSB-203ENST00000420692 SLC9C2Q5TAH2 1124 aa19.04■□□□□ 0.64
CTSB-203ENST00000420692 ZSCAN16Q9H4T2 348 aaPredicted RBP19.04■□□□□ 0.64
CTSB-203ENST00000420692 HPS5Q9UPZ3 1129 aa19.04■□□□□ 0.64
CTSB-203ENST00000420692 ZKSCAN5Q9Y2L8 839 aa19.04■□□□□ 0.64
CTSB-203ENST00000420692 CAMTA2O94983 1202 aa19.04■□□□□ 0.64
CTSB-203ENST00000420692 ILDR1Q86SU0 546 aaPredicted RBP19.04■□□□□ 0.64
CTSB-203ENST00000420692 FTOQ9C0B1 505 aaKnown RBP eCLIP19.04■□□□□ 0.64
CTSB-203ENST00000420692 SEC31BQ9NQW1 1179 aa19.04■□□□□ 0.64
CTSB-203ENST00000420692 RREB1Q92766 1687 aa19.04■□□□□ 0.64
CTSB-203ENST00000420692 ATRNO75882 1429 aa19.03■□□□□ 0.64
CTSB-203ENST00000420692 TCRBV5S4A2TA0A5A2 114 aa19.03■□□□□ 0.64
CTSB-203ENST00000420692 FAM177BA6PVY3 158 aa19.03■□□□□ 0.64
CTSB-203ENST00000420692 ATP6V1AP38606 617 aa19.03■□□□□ 0.64
CTSB-203ENST00000420692 HMGN5P82970 282 aaKnown RBP19.03■□□□□ 0.64
CTSB-203ENST00000420692 CCDC39Q9UFE4 941 aa19.03■□□□□ 0.64
CTSB-203ENST00000420692 WWC3Q9ULE0 1092 aa19.03■□□□□ 0.64
CTSB-203ENST00000420692 NAP1L2Q9ULW6 460 aaPredicted RBP19.03■□□□□ 0.64
CTSB-203ENST00000420692 ARAP2Q8WZ64 1704 aa19.03■□□□□ 0.64
CTSB-203ENST00000420692 LOC102724428A0A0B4J2F2 783 aa19.02■□□□□ 0.64
CTSB-203ENST00000420692 PRC1O43663 620 aa19.02■□□□□ 0.64
CTSB-203ENST00000420692 ZNF500O60304 480 aaPredicted RBP19.02■□□□□ 0.64
CTSB-203ENST00000420692 NR1I2O75469 434 aa19.02■□□□□ 0.64
CTSB-203ENST00000420692 MSNP26038 577 aaKnown RBP19.02■□□□□ 0.64
CTSB-203ENST00000420692 SIK1P57059 783 aa19.02■□□□□ 0.64
CTSB-203ENST00000420692 CDCA7Q9BWT1 371 aaPredicted RBP19.02■□□□□ 0.64
CTSB-203ENST00000420692 NUP62CLQ9H1M0 184 aa19.02■□□□□ 0.64
CTSB-203ENST00000420692 PUM3Q15397 648 aaKnown RBP19.02■□□□□ 0.64
CTSB-203ENST00000420692 RBM43Q6ZSC3 357 aaKnown RBP19.02■□□□□ 0.64
CTSB-203ENST00000420692 AK7Q96M32 723 aa19.02■□□□□ 0.64
CTSB-203ENST00000420692 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.02■□□□□ 0.643e-6■■□□□ 13.5
CTSB-203ENST00000420692 KDM4AO75164 1064 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 ADCY5O95622 1261 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 UBE3CQ15386 1083 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 LPIN2Q92539 896 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 THRAP3Q9Y2W1 955 aaKnown RBP19.01■□□□□ 0.63
CTSB-203ENST00000420692 PHLPP1O60346 1717 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 ZNF532Q9HCE3 1301 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 CARMIL3Q8ND23 1372 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 COL4A1P02462 1669 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 IDH1O75874 414 aaKnown RBP19.01■□□□□ 0.63
CTSB-203ENST00000420692 PDE6AP16499 860 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 MCM5P33992 734 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 GUCY1B3Q02153 619 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 MAP3K11Q16584 847 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 RCOR1Q9UKL0 485 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 MRVI1Q9Y6F6 885 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 MROH5Q6ZUA9 1318 aa19.01■□□□□ 0.63
CTSB-203ENST00000420692 A0A0G2JS52 829 aa19■□□□□ 0.63
CTSB-203ENST00000420692 ZNF213O14771 459 aa19■□□□□ 0.63
CTSB-203ENST00000420692 CEBPZQ03701 1054 aaKnown RBP19■□□□□ 0.63
CTSB-203ENST00000420692 TTF1Q15361 905 aaPredicted RBP19■□□□□ 0.63
CTSB-203ENST00000420692 TBC1D10CQ8IV04 446 aa19■□□□□ 0.63
CTSB-203ENST00000420692 CKAP2LQ8IYA6 745 aa19■□□□□ 0.63
CTSB-203ENST00000420692 MPNDQ8N594 471 aa19■□□□□ 0.63
CTSB-203ENST00000420692 NAP1L5Q96NT1 182 aaPredicted RBP19■□□□□ 0.63
CTSB-203ENST00000420692 SPATA31A5Q5VU36 1347 aa19■□□□□ 0.63
CTSB-203ENST00000420692 ZSCAN25Q6NSZ9 544 aa19■□□□□ 0.63
CTSB-203ENST00000420692 SPATA31A7Q8IWB4 1347 aa19■□□□□ 0.63
CTSB-203ENST00000420692 NCOA7Q8NI08 942 aa19■□□□□ 0.63
CTSB-203ENST00000420692 USP28Q96RU2 1077 aa19■□□□□ 0.63
CTSB-203ENST00000420692 UTP14AQ9BVJ6 771 aaKnown RBP19■□□□□ 0.63
CTSB-203ENST00000420692 CLSTN2Q9H4D0 955 aa19■□□□□ 0.63
CTSB-203ENST00000420692 KLF18A0A0U1RQI7 1052 aa18.99■□□□□ 0.63
CTSB-203ENST00000420692 CCDC192P0DO97 292 aa18.99■□□□□ 0.63
CTSB-203ENST00000420692 RAB11FIP4Q86YS3 637 aa18.99■□□□□ 0.63
CTSB-203ENST00000420692 LTBP4Q8N2S1 1624 aa18.99■□□□□ 0.63
CTSB-203ENST00000420692 GOLGA6L4A6NEF3 574 aa18.98■□□□□ 0.63
CTSB-203ENST00000420692 KCNQ2O43526 872 aa18.98■□□□□ 0.63
CTSB-203ENST00000420692 OFD1O75665 1012 aa18.98■□□□□ 0.63
CTSB-203ENST00000420692 NTSR2O95665 410 aa18.98■□□□□ 0.63
CTSB-203ENST00000420692 UQCRFS1P1P0C7P4 283 aa18.98■□□□□ 0.63
CTSB-203ENST00000420692 TYRO3Q06418 890 aa18.98■□□□□ 0.63
CTSB-203ENST00000420692 RASGRF1Q13972 1273 aa18.98■□□□□ 0.63
CTSB-203ENST00000420692 OTUD7BQ6GQQ9 843 aa18.98■□□□□ 0.63
CTSB-203ENST00000420692 CYB5R4Q7L1T6 521 aa18.98■□□□□ 0.63
CTSB-203ENST00000420692 STRBPQ96SI9 672 aaKnown RBP18.98■□□□□ 0.63
CTSB-203ENST00000420692 CFAP45Q9UL16 551 aa18.98■□□□□ 0.63
CTSB-203ENST00000420692 DOCK2Q92608 1830 aa18.98■□□□□ 0.63
CTSB-203ENST00000420692 SPATA5Q8NB90 893 aa18.98■□□□□ 0.63
CTSB-203ENST00000420692 TNMDQ9H2S6 317 aa18.98■□□□□ 0.63
CTSB-203ENST00000420692 DDX19AQ9NUU7 478 aaKnown RBP18.98■□□□□ 0.63
CTSB-203ENST00000420692 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.98■□□□□ 0.632e-8■■■□□ 14.9
CTSB-203ENST00000420692 CICQ96RK0 1608 aaPredicted RBP18.97■□□□□ 0.63
CTSB-203ENST00000420692 WDR19Q8NEZ3 1342 aa18.97■□□□□ 0.63
CTSB-203ENST00000420692 INCENPQ9NQS7 918 aa18.97■□□□□ 0.63
CTSB-203ENST00000420692 GJB4Q9NTQ9 266 aa18.97■□□□□ 0.63
CTSB-203ENST00000420692 TACC3Q9Y6A5 838 aa18.97■□□□□ 0.63
CTSB-203ENST00000420692 C4AP0C0L4 1744 aa18.97■□□□□ 0.63
CTSB-203ENST00000420692 C4BP0C0L5 1744 aa18.97■□□□□ 0.63
CTSB-203ENST00000420692 GOLGA8BA8MQT2 603 aa18.96■□□□□ 0.63
CTSB-203ENST00000420692 BICD2Q8TD16 824 aa18.96■□□□□ 0.63
CTSB-203ENST00000420692 GOLPH3LQ9H4A5 285 aa18.96■□□□□ 0.63
CTSB-203ENST00000420692 SENP2Q9HC62 589 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms