RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 PLIN1O60240 522 aa13.92□□□□□ -0.18
SSBP3-206ENST00000420121 SASH1O94885 1247 aa13.92□□□□□ -0.18
SSBP3-206ENST00000420121 CT47B1P0C2W7 299 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-206ENST00000420121 LRRC24Q50LG9 513 aa13.92□□□□□ -0.18
SSBP3-206ENST00000420121 TAF7LQ5H9L4 462 aa13.92□□□□□ -0.18
SSBP3-206ENST00000420121 VGLL2Q8N8G2 317 aa13.92□□□□□ -0.18
SSBP3-206ENST00000420121 AKAP11Q9UKA4 1901 aa13.92□□□□□ -0.18
SSBP3-206ENST00000420121 MYH13Q9UKX3 1938 aa13.92□□□□□ -0.18
SSBP3-206ENST00000420121 CASP8AP2Q9UKL3 1982 aa13.91□□□□□ -0.18
SSBP3-206ENST00000420121 RFX5P48382 616 aaPredicted RBP13.91□□□□□ -0.18
SSBP3-206ENST00000420121 MMP14P50281 582 aa13.91□□□□□ -0.18
SSBP3-206ENST00000420121 UBE4AQ14139 1066 aa13.91□□□□□ -0.18
SSBP3-206ENST00000420121 RGMBQ6NW40 437 aa13.91□□□□□ -0.18
SSBP3-206ENST00000420121 ZNF804AQ7Z570 1209 aa13.91□□□□□ -0.18
SSBP3-206ENST00000420121 OGFOD1Q8N543 542 aa13.91□□□□□ -0.18
SSBP3-206ENST00000420121 C2orf69Q8N8R5 385 aa13.91□□□□□ -0.18
SSBP3-206ENST00000420121 PCDHAC2Q9Y5I4 1007 aa13.91□□□□□ -0.18
SSBP3-206ENST00000420121 FAM205AQ6ZU69 1335 aa13.9□□□□□ -0.18
SSBP3-206ENST00000420121 FKBP1AP62942 108 aaKnown RBP13.9□□□□□ -0.18
SSBP3-206ENST00000420121 NOGQ13253 232 aa13.9□□□□□ -0.18
SSBP3-206ENST00000420121 PRAMEF18Q5VWM3 479 aa13.9□□□□□ -0.18
SSBP3-206ENST00000420121 TDRD7Q8NHU6 1098 aaKnown RBP13.9□□□□□ -0.18
SSBP3-206ENST00000420121 KLHDC4Q8TBB5 520 aa13.9□□□□□ -0.18
SSBP3-206ENST00000420121 FAM84BQ96KN1 310 aaPredicted RBP13.9□□□□□ -0.18
SSBP3-206ENST00000420121 AOX1Q06278 1338 aa13.9□□□□□ -0.19
SSBP3-206ENST00000420121 LAMB1P07942 1786 aa13.89□□□□□ -0.19
SSBP3-206ENST00000420121 GYG1P46976 350 aa13.89□□□□□ -0.19
SSBP3-206ENST00000420121 RARSP54136 660 aaKnown RBP13.89□□□□□ -0.19
SSBP3-206ENST00000420121 MOB2Q70IA6 237 aa13.89□□□□□ -0.19
SSBP3-206ENST00000420121 MTMR14Q8NCE2 650 aa13.89□□□□□ -0.19
SSBP3-206ENST00000420121 TSKSQ9UJT2 592 aa13.89□□□□□ -0.19
SSBP3-206ENST00000420121 NOB1Q9ULX3 412 aaKnown RBP13.89□□□□□ -0.19
SSBP3-206ENST00000420121 JAG2Q9Y219 1238 aa13.89□□□□□ -0.19
SSBP3-206ENST00000420121 MROH5Q6ZUA9 1318 aa13.89□□□□□ -0.19
SSBP3-206ENST00000420121 SLC10A3P09131 477 aa13.88□□□□□ -0.19
SSBP3-206ENST00000420121 HDAC9Q9UKV0 1011 aa13.88□□□□□ -0.19
SSBP3-206ENST00000420121 SSC5DA1L4H1 1573 aa13.88□□□□□ -0.19
SSBP3-206ENST00000420121 PDE8BO95263 885 aa13.87□□□□□ -0.19
SSBP3-206ENST00000420121 HIBADHP31937 336 aaKnown RBP13.87□□□□□ -0.19
SSBP3-206ENST00000420121 ZNF157P51786 506 aaPredicted RBP13.87□□□□□ -0.19
SSBP3-206ENST00000420121 FKBP1BP68106 108 aa13.87□□□□□ -0.19
SSBP3-206ENST00000420121 PTPN12Q05209 780 aaKnown RBP13.87□□□□□ -0.19
SSBP3-206ENST00000420121 FBXO33Q7Z6M2 555 aa13.87□□□□□ -0.19
SSBP3-206ENST00000420121 RASAL3Q86YV0 1011 aa13.87□□□□□ -0.19
SSBP3-206ENST00000420121 MIER1Q8N108 512 aa13.87□□□□□ -0.19
SSBP3-206ENST00000420121 COL1A1P02452 1464 aaPredicted RBP13.87□□□□□ -0.19
SSBP3-206ENST00000420121 OTOFQ9HC10 1997 aa13.86□□□□□ -0.19
SSBP3-206ENST00000420121 SPDYE2BA6NHP3 402 aa13.86□□□□□ -0.19
SSBP3-206ENST00000420121 F8W031 263 aaPredicted RBP13.86□□□□□ -0.19
SSBP3-206ENST00000420121 SPDYE6P0CI01 402 aa13.86□□□□□ -0.19
SSBP3-206ENST00000420121 FGFR2P21802 821 aa13.86□□□□□ -0.19
SSBP3-206ENST00000420121 KIF23Q02241 960 aaPredicted RBP13.86□□□□□ -0.19
SSBP3-206ENST00000420121 GRIK5Q16478 980 aa13.86□□□□□ -0.19
SSBP3-206ENST00000420121 CFAP100Q494V2 611 aa13.86□□□□□ -0.19
SSBP3-206ENST00000420121 ATG9AQ7Z3C6 839 aa13.86□□□□□ -0.19
SSBP3-206ENST00000420121 CCDC102AQ96A19 550 aa13.86□□□□□ -0.19
SSBP3-206ENST00000420121 PRMT6Q96LA8 375 aaPredicted RBP13.86□□□□□ -0.19
SSBP3-206ENST00000420121 UBE2Q2LH0YL09 131 aa13.85□□□□□ -0.19
SSBP3-206ENST00000420121 CA12O43570 354 aa13.85□□□□□ -0.19
SSBP3-206ENST00000420121 CAPN15O75808 1086 aa13.85□□□□□ -0.19
SSBP3-206ENST00000420121 DLGAP5Q15398 846 aa13.85□□□□□ -0.19
SSBP3-206ENST00000420121 METTL24Q5JXM2 366 aa13.85□□□□□ -0.19
SSBP3-206ENST00000420121 MFSD14BQ5SR56 506 aa13.85□□□□□ -0.19
SSBP3-206ENST00000420121 APOBEC3FQ8IUX4 373 aaKnown RBP13.85□□□□□ -0.19
SSBP3-206ENST00000420121 BEGAINQ9BUH8 593 aa13.85□□□□□ -0.19
SSBP3-206ENST00000420121 API5Q9BZZ5 524 aaKnown RBP13.85□□□□□ -0.19
SSBP3-206ENST00000420121 EYA2O00167 538 aa13.84□□□□□ -0.19
SSBP3-206ENST00000420121 ARHGAP45Q92619 1136 aa13.84□□□□□ -0.19
SSBP3-206ENST00000420121 CSRNP1Q96S65 589 aa13.84□□□□□ -0.19
SSBP3-206ENST00000420121 MEIS3Q99687 375 aa13.84□□□□□ -0.19
SSBP3-206ENST00000420121 IQSEC3Q9UPP2 1182 aaPredicted RBP13.84□□□□□ -0.19
SSBP3-206ENST00000420121 TNNQ9UQP3 1299 aa13.84□□□□□ -0.19
SSBP3-206ENST00000420121 LRRFIP2Q9Y608 721 aaKnown RBP13.84□□□□□ -0.19
SSBP3-206ENST00000420121 KIF16BQ96L93 1317 aa13.84□□□□□ -0.19
SSBP3-206ENST00000420121 CLRN2A0PK11 232 aa13.83□□□□□ -0.2
SSBP3-206ENST00000420121 UBTFL1P0CB47 393 aaPredicted RBP13.83□□□□□ -0.2
SSBP3-206ENST00000420121 INTS3Q68E01 1043 aaKnown RBP13.83□□□□□ -0.2
SSBP3-206ENST00000420121 DEFB129Q9H1M3 183 aa13.83□□□□□ -0.2
SSBP3-206ENST00000420121 RTN4Q9NQC3 1192 aaKnown RBP13.83□□□□□ -0.2
SSBP3-206ENST00000420121 FZD1Q9UP38 647 aa13.83□□□□□ -0.2
SSBP3-206ENST00000420121 BCAR3O75815 825 aa13.82□□□□□ -0.2
SSBP3-206ENST00000420121 BCAMP50895 628 aa13.82□□□□□ -0.2
SSBP3-206ENST00000420121 LDLRAD1Q5T700 205 aa13.82□□□□□ -0.2
SSBP3-206ENST00000420121 DIEXFQ68CQ4 756 aaKnown RBP13.82□□□□□ -0.2
SSBP3-206ENST00000420121 RNF186Q9NXI6 227 aa13.82□□□□□ -0.2
SSBP3-206ENST00000420121 TTF2Q9UNY4 1162 aaKnown RBP13.82□□□□□ -0.2
SSBP3-206ENST00000420121 TRIM27P14373 513 aa13.81□□□□□ -0.2
SSBP3-206ENST00000420121 PUM3Q15397 648 aaKnown RBP13.81□□□□□ -0.2
SSBP3-206ENST00000420121 MAP3K11Q16584 847 aa13.81□□□□□ -0.2
SSBP3-206ENST00000420121 SPDYE2Q495Y8 402 aa13.81□□□□□ -0.2
SSBP3-206ENST00000420121 SAGE1Q9NXZ1 904 aa13.81□□□□□ -0.2
SSBP3-206ENST00000420121 SERPINA10Q9UK55 444 aa13.81□□□□□ -0.2
SSBP3-206ENST00000420121 PA2G4Q9UQ80 394 aaKnown RBP13.81□□□□□ -0.2
SSBP3-206ENST00000420121 CIAO1O76071 339 aa13.8□□□□□ -0.2
SSBP3-206ENST00000420121 DSG3P32926 999 aa13.8□□□□□ -0.2
SSBP3-206ENST00000420121 NF2P35240 595 aa13.8□□□□□ -0.2
SSBP3-206ENST00000420121 CRKP46108 304 aa13.8□□□□□ -0.2
SSBP3-206ENST00000420121 CHAF1AQ13111 956 aaPredicted RBP13.8□□□□□ -0.2
SSBP3-206ENST00000420121 PRKG1Q13976 671 aa13.8□□□□□ -0.2
SSBP3-206ENST00000420121 CAVIN4Q5BKX8 364 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms