RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 GMLQ99445 158 aa28.45■■■□□ 2.14
SMARCB1-205ENST00000417137 ZNF609O15014 1411 aa28.44■■■□□ 2.14
SMARCB1-205ENST00000417137 TNNI3KQ59H18 835 aa28.43■■■□□ 2.14
SMARCB1-205ENST00000417137 LDHDQ86WU2 507 aa28.43■■■□□ 2.14
SMARCB1-205ENST00000417137 SMC1BQ8NDV3 1235 aa28.43■■■□□ 2.14
SMARCB1-205ENST00000417137 IQSEC3Q9UPP2 1182 aaPredicted RBP28.43■■■□□ 2.14
SMARCB1-205ENST00000417137 CLEC11AQ9Y240 323 aa28.43■■■□□ 2.14
SMARCB1-205ENST00000417137 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.43■■■□□ 2.14
SMARCB1-205ENST00000417137 FPGT-TNNI3KV9GXZ4 949 aa28.43■■■□□ 2.14
SMARCB1-205ENST00000417137 SCN9AQ15858 1988 aa28.42■■■□□ 2.14
SMARCB1-205ENST00000417137 SEMA3EO15041 775 aa28.42■■■□□ 2.14
SMARCB1-205ENST00000417137 ADORA1P30542 326 aa28.42■■■□□ 2.14
SMARCB1-205ENST00000417137 CCDC102BQ68D86 513 aa28.42■■■□□ 2.14
SMARCB1-205ENST00000417137 RHPN1Q8TCX5 695 aa28.42■■■□□ 2.14
SMARCB1-205ENST00000417137 TBC1D22AQ8WUA7 517 aa28.42■■■□□ 2.14
SMARCB1-205ENST00000417137 KIF1BPQ96EK5 621 aa28.42■■■□□ 2.14
SMARCB1-205ENST00000417137 MXD3Q9BW11 206 aa28.42■■■□□ 2.14
SMARCB1-205ENST00000417137 HDAC9Q9UKV0 1011 aa28.42■■■□□ 2.14
SMARCB1-205ENST00000417137 PCDHB15Q9Y5E8 787 aa28.42■■■□□ 2.14
SMARCB1-205ENST00000417137 ZNF280AP59817 542 aaPredicted RBP28.41■■■□□ 2.14
SMARCB1-205ENST00000417137 FSTL1Q12841 308 aa28.41■■■□□ 2.14
SMARCB1-205ENST00000417137 CHAF1AQ13111 956 aaPredicted RBP28.41■■■□□ 2.14
SMARCB1-205ENST00000417137 ZBTB22O15209 634 aa28.4■■■□□ 2.14
SMARCB1-205ENST00000417137 PHKA1P46020 1223 aa28.4■■■□□ 2.14
SMARCB1-205ENST00000417137 MFSD14BQ5SR56 506 aa28.4■■■□□ 2.14
SMARCB1-205ENST00000417137 DENND2AQ9ULE3 1009 aa28.4■■■□□ 2.14
SMARCB1-205ENST00000417137 JAG2Q9Y219 1238 aa28.4■■■□□ 2.14
SMARCB1-205ENST00000417137 CHADLQ6NUI6 762 aa28.39■■■□□ 2.14
SMARCB1-205ENST00000417137 WDR66Q8TBY9 1149 aa28.39■■■□□ 2.14
SMARCB1-205ENST00000417137 SHTN1A0MZ66 631 aa28.38■■■□□ 2.13
SMARCB1-205ENST00000417137 APBB1O00213 710 aa28.38■■■□□ 2.13
SMARCB1-205ENST00000417137 CCDC158Q5M9N0 1113 aa28.38■■■□□ 2.13
SMARCB1-205ENST00000417137 RBM26Q5T8P6 1007 aaKnown RBP28.38■■■□□ 2.13
SMARCB1-205ENST00000417137 SAMD7Q7Z3H4 446 aa28.38■■■□□ 2.13
SMARCB1-205ENST00000417137 KIAA0825Q8IV33 1275 aa28.38■■■□□ 2.13
SMARCB1-205ENST00000417137 CLASRPQ8N2M8 674 aaKnown RBP28.38■■■□□ 2.13
SMARCB1-205ENST00000417137 EXOC6Q8TAG9 804 aa28.38■■■□□ 2.13
SMARCB1-205ENST00000417137 TBC1D10BQ4KMP7 808 aaPredicted RBP28.37■■■□□ 2.13
SMARCB1-205ENST00000417137 CERS5Q8N5B7 392 aa28.37■■■□□ 2.13
SMARCB1-205ENST00000417137 ZC3H15Q8WU90 426 aaKnown RBP28.37■■■□□ 2.13
SMARCB1-205ENST00000417137 DCTPP1Q9H773 170 aa28.37■■■□□ 2.13
SMARCB1-205ENST00000417137 MYOZ2Q9NPC6 264 aa28.37■■■□□ 2.13
SMARCB1-205ENST00000417137 UQCRFS1P1P0C7P4 283 aa28.36■■■□□ 2.13
SMARCB1-205ENST00000417137 POTEIP0CG38 1075 aa28.36■■■□□ 2.13
SMARCB1-205ENST00000417137 POTEJP0CG39 1038 aa28.36■■■□□ 2.13
SMARCB1-205ENST00000417137 KIF4BQ2VIQ3 1234 aa28.36■■■□□ 2.13
SMARCB1-205ENST00000417137 DNAJC5GQ8N7S2 189 aa28.36■■■□□ 2.13
SMARCB1-205ENST00000417137 PSME4Q14997 1843 aa28.36■■■□□ 2.13
SMARCB1-205ENST00000417137 AACSQ86V21 672 aa28.35■■■□□ 2.13
SMARCB1-205ENST00000417137 TRPM4Q8TD43 1214 aa28.35■■■□□ 2.13
SMARCB1-205ENST00000417137 EAF2Q96CJ1 260 aaPredicted RBP28.35■■■□□ 2.13
SMARCB1-205ENST00000417137 IL1RAPL2Q9NP60 686 aa28.35■■■□□ 2.13
SMARCB1-205ENST00000417137 SUGT1Q9Y2Z0 365 aa28.35■■■□□ 2.13
SMARCB1-205ENST00000417137 HIRAP54198 1017 aaPredicted RBP28.34■■■□□ 2.13
SMARCB1-205ENST00000417137 DBNDD2Q9BQY9 259 aa28.34■■■□□ 2.13
SMARCB1-205ENST00000417137 LRRCC1Q9C099 1032 aa28.34■■■□□ 2.13
SMARCB1-205ENST00000417137 CCDC8Q9H0W5 538 aaPredicted RBP28.34■■■□□ 2.13
SMARCB1-205ENST00000417137 F8W031 263 aaPredicted RBP28.33■■■□□ 2.13
SMARCB1-205ENST00000417137 TTC39AQ5SRH9 613 aa28.33■■■□□ 2.13
SMARCB1-205ENST00000417137 IFIT2P09913 472 aaKnown RBP28.32■■■□□ 2.12
SMARCB1-205ENST00000417137 ARID4AP29374 1257 aaPredicted RBP28.32■■■□□ 2.12
SMARCB1-205ENST00000417137 ZGPATQ8N5A5 531 aaKnown RBP28.32■■■□□ 2.12
SMARCB1-205ENST00000417137 PGAP2Q9UHJ9 254 aa28.32■■■□□ 2.12
SMARCB1-205ENST00000417137 TTF2Q9UNY4 1162 aaKnown RBP28.32■■■□□ 2.12
SMARCB1-205ENST00000417137 PDS5AQ29RF7 1337 aaKnown RBP28.32■■■□□ 2.12
SMARCB1-205ENST00000417137 HDAC1Q13547 482 aaPredicted RBP28.31■■■□□ 2.12
SMARCB1-205ENST00000417137 RASGRF1Q13972 1273 aa28.31■■■□□ 2.12
SMARCB1-205ENST00000417137 DBNLQ9UJU6 430 aaKnown RBP28.31■■■□□ 2.12
SMARCB1-205ENST00000417137 EGFRP00533 1210 aa28.3■■■□□ 2.12
SMARCB1-205ENST00000417137 DLGAP5Q15398 846 aa28.3■■■□□ 2.12
SMARCB1-205ENST00000417137 CNTROBQ8N137 903 aa28.3■■■□□ 2.12
SMARCB1-205ENST00000417137 ZNF512BQ96KM6 892 aaPredicted RBP28.3■■■□□ 2.12
SMARCB1-205ENST00000417137 RWDD1Q9H446 243 aaPredicted RBP28.3■■■□□ 2.12
SMARCB1-205ENST00000417137 MAST3O60307 1309 aa28.29■■■□□ 2.12
SMARCB1-205ENST00000417137 SALL1Q9NSC2 1324 aa28.29■■■□□ 2.12
SMARCB1-205ENST00000417137 IRX6P78412 446 aaPredicted RBP28.29■■■□□ 2.12
SMARCB1-205ENST00000417137 SCARF1Q14162 830 aa28.29■■■□□ 2.12
SMARCB1-205ENST00000417137 MAP1SQ66K74 1059 aaPredicted RBP28.29■■■□□ 2.12
SMARCB1-205ENST00000417137 SPATA5Q8NB90 893 aa28.29■■■□□ 2.12
SMARCB1-205ENST00000417137 DCPSQ96C86 337 aaKnown RBP28.29■■■□□ 2.12
SMARCB1-205ENST00000417137 ARAP2Q8WZ64 1704 aa28.29■■■□□ 2.12
SMARCB1-205ENST00000417137 CENPBP07199 599 aaPredicted RBP28.28■■■□□ 2.12
SMARCB1-205ENST00000417137 SPTY2D1Q68D10 685 aaPredicted RBP28.28■■■□□ 2.12
SMARCB1-205ENST00000417137 MTMR14Q8NCE2 650 aa28.28■■■□□ 2.12
SMARCB1-205ENST00000417137 MRIQ9BWK5 157 aa28.28■■■□□ 2.12
SMARCB1-205ENST00000417137 BCL11AQ9H165 835 aa28.28■■■□□ 2.12
SMARCB1-205ENST00000417137 HMG20BQ9P0W2 317 aa28.28■■■□□ 2.12
SMARCB1-205ENST00000417137 SERPINA10Q9UK55 444 aa28.28■■■□□ 2.12
SMARCB1-205ENST00000417137 RBM5P52756 815 aaKnown RBP eCLIP28.27■■■□□ 2.12
SMARCB1-205ENST00000417137 HDLBPQ00341 1268 aaKnown RBP28.27■■■□□ 2.12
SMARCB1-205ENST00000417137 GCC1Q96CN9 775 aa28.27■■■□□ 2.12
SMARCB1-205ENST00000417137 TLR7Q9NYK1 1049 aaKnown RBP28.27■■■□□ 2.12
SMARCB1-205ENST00000417137 LDHBP07195 334 aaKnown RBP28.26■■■□□ 2.11
SMARCB1-205ENST00000417137 CFAP100Q494V2 611 aa28.26■■■□□ 2.11
SMARCB1-205ENST00000417137 CDC37L1Q7L3B6 337 aa28.26■■■□□ 2.11
SMARCB1-205ENST00000417137 ZBTB47Q9UFB7 747 aaPredicted RBP28.26■■■□□ 2.11
SMARCB1-205ENST00000417137 WNT10BO00744 389 aa28.25■■■□□ 2.11
SMARCB1-205ENST00000417137 MYO1BO43795 1136 aa28.25■■■□□ 2.11
SMARCB1-205ENST00000417137 ABCF2Q9UG63 623 aa28.25■■■□□ 2.11
SMARCB1-205ENST00000417137 ZNF646O15015 1829 aaPredicted RBP28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms