RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	POLL	Q9UGP5	575 aa		11.6	□□□□□ -0.55
NIF3L1-206	ENST00000416651	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.59	□□□□□ -0.55
NIF3L1-206	ENST00000416651		H0YGN5	161 aa		11.59	□□□□□ -0.55
NIF3L1-206	ENST00000416651	FKTN	O75072	461 aa		11.59	□□□□□ -0.55
NIF3L1-206	ENST00000416651	ANXA1	P04083	346 aa		11.59	□□□□□ -0.55
NIF3L1-206	ENST00000416651	TM4SF4	P48230	202 aa		11.59	□□□□□ -0.55
NIF3L1-206	ENST00000416651	SCARF1	Q14162	830 aa		11.59	□□□□□ -0.55
NIF3L1-206	ENST00000416651	SLC10A5	Q5PT55	438 aa		11.59	□□□□□ -0.55
NIF3L1-206	ENST00000416651	OTOP1	Q7RTM1	612 aa		11.59	□□□□□ -0.55
NIF3L1-206	ENST00000416651	SULF1	Q8IWU6	871 aa		11.59	□□□□□ -0.55
NIF3L1-206	ENST00000416651	SLC17A8	Q8NDX2	589 aa		11.59	□□□□□ -0.55
NIF3L1-206	ENST00000416651	RSPH6A	Q9H0K4	717 aa		11.59	□□□□□ -0.55
NIF3L1-206	ENST00000416651	TRIM17	Q9Y577	477 aa		11.59	□□□□□ -0.55
NIF3L1-206	ENST00000416651	LAMB4	A4D0S4	1761 aa		11.59	□□□□□ -0.55
NIF3L1-206	ENST00000416651	ECE2	O60344	883 aa		11.58	□□□□□ -0.56
NIF3L1-206	ENST00000416651	GPSM2	P81274	684 aa		11.58	□□□□□ -0.56
NIF3L1-206	ENST00000416651	LRCH3	Q96II8	777 aa		11.58	□□□□□ -0.56
NIF3L1-206	ENST00000416651	CUL9	Q8IWT3	2517 aa		11.58	□□□□□ -0.56
NIF3L1-206	ENST00000416651	GFRA3	O60609	400 aa		11.57	□□□□□ -0.56
NIF3L1-206	ENST00000416651	BBOX1	O75936	387 aa		11.57	□□□□□ -0.56
NIF3L1-206	ENST00000416651	PRKG1	Q13976	671 aa		11.57	□□□□□ -0.56
NIF3L1-206	ENST00000416651	WASHC4	Q2M389	1173 aa		11.57	□□□□□ -0.56
NIF3L1-206	ENST00000416651	PROSER3	Q2NL68	480 aa		11.57	□□□□□ -0.56
NIF3L1-206	ENST00000416651	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.57	□□□□□ -0.56
NIF3L1-206	ENST00000416651	KIF6	Q6ZMV9	814 aa		11.57	□□□□□ -0.56
NIF3L1-206	ENST00000416651	LRP10	Q7Z4F1	713 aa		11.57	□□□□□ -0.56
NIF3L1-206	ENST00000416651	CELF1	Q92879	486 aa	Known RBP	11.57	□□□□□ -0.56
NIF3L1-206	ENST00000416651	RTN4	Q9NQC3	1192 aa	Known RBP	11.57	□□□□□ -0.56
NIF3L1-206	ENST00000416651	LCE2B	O14633	110 aa		11.56	□□□□□ -0.56
NIF3L1-206	ENST00000416651	MYC	P01106	439 aa	Predicted RBP	11.56	□□□□□ -0.56
NIF3L1-206	ENST00000416651	PTPN12	Q05209	780 aa	Known RBP	11.56	□□□□□ -0.56
NIF3L1-206	ENST00000416651	GRAP	Q13588	217 aa		11.56	□□□□□ -0.56
NIF3L1-206	ENST00000416651	TRAF7	Q6Q0C0	670 aa		11.56	□□□□□ -0.56
NIF3L1-206	ENST00000416651	GRAPL	Q8TC17	118 aa	Predicted RBP	11.56	□□□□□ -0.56
NIF3L1-206	ENST00000416651	UTP14A	Q9BVJ6	771 aa	Known RBP	11.56	□□□□□ -0.56
NIF3L1-206	ENST00000416651	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.56	□□□□□ -0.56
NIF3L1-206	ENST00000416651	ANKRD36C	Q5JPF3	1778 aa		11.56	□□□□□ -0.56
NIF3L1-206	ENST00000416651	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.56	□□□□□ -0.56
NIF3L1-206	ENST00000416651		A0A0C4DFX4	3053 aa		11.56	□□□□□ -0.56
NIF3L1-206	ENST00000416651	LRRC37A	A6NMS7	1700 aa		11.55	□□□□□ -0.56
NIF3L1-206	ENST00000416651	KDM3B	Q7LBC6	1761 aa		11.55	□□□□□ -0.56
NIF3L1-206	ENST00000416651	WTIP	A6NIX2	430 aa	Predicted RBP	11.55	□□□□□ -0.56
NIF3L1-206	ENST00000416651	C6orf229	H3BNL8	230 aa		11.55	□□□□□ -0.56
NIF3L1-206	ENST00000416651	PER1	O15534	1290 aa	Predicted RBP	11.55	□□□□□ -0.56
NIF3L1-206	ENST00000416651	VIL1	P09327	827 aa	Known RBP	11.55	□□□□□ -0.56
NIF3L1-206	ENST00000416651	PPP1R42	Q7Z4L9	355 aa		11.55	□□□□□ -0.56
NIF3L1-206	ENST00000416651	CD99L2	Q8TCZ2	262 aa		11.55	□□□□□ -0.56
NIF3L1-206	ENST00000416651	MXD3	Q9BW11	206 aa		11.55	□□□□□ -0.56
NIF3L1-206	ENST00000416651	TMX4	Q9H1E5	349 aa	Predicted RBP	11.55	□□□□□ -0.56
NIF3L1-206	ENST00000416651	RBM27	Q9P2N5	1060 aa	Known RBP	11.55	□□□□□ -0.56
NIF3L1-206	ENST00000416651	PDIA6	Q15084	440 aa		11.54	□□□□□ -0.56
NIF3L1-206	ENST00000416651	NBPF9	Q3BBW0	867 aa		11.54	□□□□□ -0.56
NIF3L1-206	ENST00000416651	NOM1	Q5C9Z4	860 aa	Known RBP	11.54	□□□□□ -0.56
NIF3L1-206	ENST00000416651	PTPN22	Q9Y2R2	807 aa		11.54	□□□□□ -0.56
NIF3L1-206	ENST00000416651	COL6A3	P12111	3177 aa		11.54	□□□□□ -0.56
NIF3L1-206	ENST00000416651	RANBP2	P49792	3224 aa	Known RBP	11.54	□□□□□ -0.56
NIF3L1-206	ENST00000416651	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
NIF3L1-206	ENST00000416651	RPS12	P25398	132 aa	Known RBP	11.53	□□□□□ -0.56
NIF3L1-206	ENST00000416651	ZNF280A	P59817	542 aa	Predicted RBP	11.53	□□□□□ -0.56
NIF3L1-206	ENST00000416651	EIF4A1	P60842	406 aa	Known RBP	11.53	□□□□□ -0.56
NIF3L1-206	ENST00000416651	TTLL12	Q14166	644 aa	Predicted RBP	11.53	□□□□□ -0.56
NIF3L1-206	ENST00000416651	TAF7	Q15545	349 aa	Predicted RBP	11.53	□□□□□ -0.56
NIF3L1-206	ENST00000416651	DDX46	Q7L014	1031 aa	Known RBP	11.53	□□□□□ -0.56
NIF3L1-206	ENST00000416651	SOX1	O00570	391 aa	Predicted RBP	11.52	□□□□□ -0.57
NIF3L1-206	ENST00000416651	NLRP10	Q86W26	655 aa		11.52	□□□□□ -0.57
NIF3L1-206	ENST00000416651	TBC1D16	Q8TBP0	767 aa		11.52	□□□□□ -0.57
NIF3L1-206	ENST00000416651	GML	Q99445	158 aa		11.52	□□□□□ -0.57
NIF3L1-206	ENST00000416651	CFHR5	Q9BXR6	569 aa		11.52	□□□□□ -0.57
NIF3L1-206	ENST00000416651	DDX60	Q8IY21	1712 aa	Known RBP	11.52	□□□□□ -0.57
NIF3L1-206	ENST00000416651	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.51	□□□□□ -0.57
NIF3L1-206	ENST00000416651	PARP10	Q53GL7	1025 aa		11.51	□□□□□ -0.57
NIF3L1-206	ENST00000416651	SPRYD7	Q5W111	196 aa		11.51	□□□□□ -0.57
NIF3L1-206	ENST00000416651	RTF1	Q92541	710 aa	Known RBP	11.51	□□□□□ -0.57
NIF3L1-206	ENST00000416651	ARMC5	Q96C12	935 aa		11.51	□□□□□ -0.57
NIF3L1-206	ENST00000416651	ZSWIM8	A7E2V4	1837 aa		11.51	□□□□□ -0.57
NIF3L1-206	ENST00000416651	PPP4C	P60510	307 aa		11.5	□□□□□ -0.57
NIF3L1-206	ENST00000416651	FKBP1B	P68106	108 aa		11.5	□□□□□ -0.57
NIF3L1-206	ENST00000416651	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
NIF3L1-206	ENST00000416651	RTL5	Q5HYW3	569 aa	Predicted RBP	11.5	□□□□□ -0.57
NIF3L1-206	ENST00000416651	INTS3	Q68E01	1043 aa	Known RBP	11.5	□□□□□ -0.57
NIF3L1-206	ENST00000416651	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.5	□□□□□ -0.57
NIF3L1-206	ENST00000416651	NECTIN2	Q92692	538 aa		11.5	□□□□□ -0.57
NIF3L1-206	ENST00000416651	DDX12P	Q92771	950 aa		11.5	□□□□□ -0.57
NIF3L1-206	ENST00000416651	CLMN	Q96JQ2	1002 aa		11.5	□□□□□ -0.57
NIF3L1-206	ENST00000416651	MYOZ2	Q9NPC6	264 aa		11.5	□□□□□ -0.57
NIF3L1-206	ENST00000416651	TRMT112	Q9UI30	125 aa	Known RBP	11.5	□□□□□ -0.57
NIF3L1-206	ENST00000416651	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.5	□□□□□ -0.57
NIF3L1-206	ENST00000416651	EIF2S2	P20042	333 aa	Known RBP	11.49	□□□□□ -0.57
NIF3L1-206	ENST00000416651	GJA5	P36382	358 aa		11.49	□□□□□ -0.57
NIF3L1-206	ENST00000416651	AIMP1	Q12904	312 aa	Known RBP	11.49	□□□□□ -0.57
NIF3L1-206	ENST00000416651	PACS2	Q86VP3	889 aa		11.49	□□□□□ -0.57
NIF3L1-206	ENST00000416651	ZNF333	Q96JL9	665 aa		11.49	□□□□□ -0.57
NIF3L1-206	ENST00000416651	PRKD2	Q9BZL6	878 aa		11.49	□□□□□ -0.57
NIF3L1-206	ENST00000416651	ZNF609	O15014	1411 aa		11.49	□□□□□ -0.57
NIF3L1-206	ENST00000416651	SASH1	O94885	1247 aa		11.48	□□□□□ -0.57
NIF3L1-206	ENST00000416651	CRHR2	Q13324	411 aa		11.48	□□□□□ -0.57
NIF3L1-206	ENST00000416651	TJAP1	Q5JTD0	557 aa		11.48	□□□□□ -0.57
NIF3L1-206	ENST00000416651	FAM89A	Q96GI7	184 aa		11.48	□□□□□ -0.57
NIF3L1-206	ENST00000416651	PTPN18	Q99952	460 aa		11.48	□□□□□ -0.57
NIF3L1-206	ENST00000416651	SEC31B	Q9NQW1	1179 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms