RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 TTLL12Q14166 644 aaPredicted RBP19.59■□□□□ 0.73
ACTB-202ENST00000414620 RASAL3Q86YV0 1011 aa19.59■□□□□ 0.73
ACTB-202ENST00000414620 PCDHAC2Q9Y5I4 1007 aa19.59■□□□□ 0.73
ACTB-202ENST00000414620 ANKRD44Q8N8A2 993 aa19.58■□□□□ 0.72
ACTB-202ENST00000414620 SMC4Q9NTJ3 1288 aa19.58■□□□□ 0.72
ACTB-202ENST00000414620 UBE2Q2LH0YL09 131 aa19.57■□□□□ 0.72
ACTB-202ENST00000414620 GYG1P46976 350 aa19.57■□□□□ 0.72
ACTB-202ENST00000414620 PRKG1Q13976 671 aa19.57■□□□□ 0.72
ACTB-202ENST00000414620 DLGAP5Q15398 846 aa19.57■□□□□ 0.72
ACTB-202ENST00000414620 ABHD8Q96I13 439 aa19.57■□□□□ 0.72
ACTB-202ENST00000414620 ZBED3Q96IU2 234 aaPredicted RBP19.57■□□□□ 0.72
ACTB-202ENST00000414620 FKBP1BP68106 108 aa19.56■□□□□ 0.72
ACTB-202ENST00000414620 RABL6Q3YEC7 729 aaPredicted RBP19.56■□□□□ 0.72
ACTB-202ENST00000414620 LRRC24Q50LG9 513 aa19.56■□□□□ 0.72
ACTB-202ENST00000414620 APOBEC3FQ8IUX4 373 aaKnown RBP19.56■□□□□ 0.72
ACTB-202ENST00000414620 KLHDC4Q8TBB5 520 aa19.56■□□□□ 0.72
ACTB-202ENST00000414620 NF2P35240 595 aa19.55■□□□□ 0.72
ACTB-202ENST00000414620 MMP14P50281 582 aa19.55■□□□□ 0.72
ACTB-202ENST00000414620 UBE4AQ14139 1066 aa19.55■□□□□ 0.72
ACTB-202ENST00000414620 ALDH1L2Q3SY69 923 aa19.55■□□□□ 0.72
ACTB-202ENST00000414620 CFAP100Q494V2 611 aa19.55■□□□□ 0.72
ACTB-202ENST00000414620 RIPOR2Q9Y4F9 1068 aa19.55■□□□□ 0.72
ACTB-202ENST00000414620 MROH5Q6ZUA9 1318 aa19.54■□□□□ 0.72
ACTB-202ENST00000414620 CLRN2A0PK11 232 aa19.54■□□□□ 0.72
ACTB-202ENST00000414620 METTL24Q5JXM2 366 aa19.54■□□□□ 0.72
ACTB-202ENST00000414620 USP44Q9H0E7 712 aa19.54■□□□□ 0.72
ACTB-202ENST00000414620 FZD1Q9UP38 647 aa19.54■□□□□ 0.72
ACTB-202ENST00000414620 AOX1Q06278 1338 aa19.53■□□□□ 0.72
ACTB-202ENST00000414620 TRPA1O75762 1119 aa19.53■□□□□ 0.72
ACTB-202ENST00000414620 HIBADHP31937 336 aaKnown RBP19.53■□□□□ 0.72
ACTB-202ENST00000414620 RBM5P52756 815 aaKnown RBP eCLIP19.53■□□□□ 0.721e-6■■■□□ 18.7
ACTB-202ENST00000414620 FKBP1AP62942 108 aaKnown RBP19.53■□□□□ 0.72
ACTB-202ENST00000414620 MKRN3Q13064 507 aaKnown RBP19.53■□□□□ 0.72
ACTB-202ENST00000414620 TDRD7Q8NHU6 1098 aaKnown RBP19.53■□□□□ 0.72
ACTB-202ENST00000414620 CSRNP1Q96S65 589 aa19.53■□□□□ 0.72
ACTB-202ENST00000414620 RNF186Q9NXI6 227 aa19.53■□□□□ 0.72
ACTB-202ENST00000414620 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.53■□□□□ 0.72
ACTB-202ENST00000414620 IQSEC3Q9UPP2 1182 aaPredicted RBP19.53■□□□□ 0.72
ACTB-202ENST00000414620 OTOFQ9HC10 1997 aa19.53■□□□□ 0.72
ACTB-202ENST00000414620 COL1A1P02452 1464 aaPredicted RBP19.53■□□□□ 0.72
ACTB-202ENST00000414620 CCER2I3L3R5 266 aa19.52■□□□□ 0.72
ACTB-202ENST00000414620 MFSD14BQ5SR56 506 aa19.52■□□□□ 0.72
ACTB-202ENST00000414620 TRMT2AQ8IZ69 625 aaKnown RBP19.52■□□□□ 0.72
ACTB-202ENST00000414620 FAM84BQ96KN1 310 aaPredicted RBP19.52■□□□□ 0.72
ACTB-202ENST00000414620 VEZTQ9HBM0 779 aa19.52■□□□□ 0.72
ACTB-202ENST00000414620 FAM205AQ6ZU69 1335 aa19.51■□□□□ 0.71
ACTB-202ENST00000414620 MTMR14Q8NCE2 650 aa19.51■□□□□ 0.71
ACTB-202ENST00000414620 PRMT6Q96LA8 375 aaPredicted RBP19.51■□□□□ 0.71
ACTB-202ENST00000414620 DEFB129Q9H1M3 183 aa19.51■□□□□ 0.71
ACTB-202ENST00000414620 SAGE1Q9NXZ1 904 aa19.51■□□□□ 0.71
ACTB-202ENST00000414620 NOB1Q9ULX3 412 aaKnown RBP19.51■□□□□ 0.71
ACTB-202ENST00000414620 ANGEL1Q9UNK9 670 aaKnown RBP19.51■□□□□ 0.71
ACTB-202ENST00000414620 SSC5DA1L4H1 1573 aa19.51■□□□□ 0.71
ACTB-202ENST00000414620 SPDYE2BA6NHP3 402 aa19.5■□□□□ 0.71
ACTB-202ENST00000414620 MYO1BO43795 1136 aa19.5■□□□□ 0.71
ACTB-202ENST00000414620 SPDYE6P0CI01 402 aa19.5■□□□□ 0.71
ACTB-202ENST00000414620 CHAF1AQ13111 956 aaPredicted RBP19.5■□□□□ 0.71
ACTB-202ENST00000414620 DGKZQ13574 1117 aa19.5■□□□□ 0.71
ACTB-202ENST00000414620 ARMC9Q7Z3E5 817 aa19.5■□□□□ 0.71
ACTB-202ENST00000414620 VPS37DQ86XT2 251 aa19.5■□□□□ 0.71
ACTB-202ENST00000414620 MCOLN1Q9GZU1 580 aa19.5■□□□□ 0.71
ACTB-202ENST00000414620 TTF2Q9UNY4 1162 aaKnown RBP19.5■□□□□ 0.71
ACTB-202ENST00000414620 CCDC85CA6NKD9 419 aa19.49■□□□□ 0.71
ACTB-202ENST00000414620 PTPN12Q05209 780 aaKnown RBP19.49■□□□□ 0.71
ACTB-202ENST00000414620 VGLL2Q8N8G2 317 aa19.49■□□□□ 0.71
ACTB-202ENST00000414620 LAMB1P07942 1786 aa19.48■□□□□ 0.71
ACTB-202ENST00000414620 PDE8BO95263 885 aa19.48■□□□□ 0.71
ACTB-202ENST00000414620 FRAT2O75474 233 aaPredicted RBP19.47■□□□□ 0.71
ACTB-202ENST00000414620 RFX5P48382 616 aaPredicted RBP19.47■□□□□ 0.71
ACTB-202ENST00000414620 GRIK5Q16478 980 aa19.47■□□□□ 0.71
ACTB-202ENST00000414620 CAVIN4Q5BKX8 364 aa19.47■□□□□ 0.71
ACTB-202ENST00000414620 FBXO33Q7Z6M2 555 aa19.47■□□□□ 0.71
ACTB-202ENST00000414620 CT47B1P0C2W7 299 aaPredicted RBP19.46■□□□□ 0.71
ACTB-202ENST00000414620 UBTFL1P0CB47 393 aaPredicted RBP19.46■□□□□ 0.71
ACTB-202ENST00000414620 BCAMP50895 628 aa19.46■□□□□ 0.71
ACTB-202ENST00000414620 TDRD3Q9H7E2 651 aaKnown RBP19.46■□□□□ 0.71
ACTB-202ENST00000414620 EYA2O00167 538 aa19.45■□□□□ 0.7
ACTB-202ENST00000414620 CRKP46108 304 aa19.45■□□□□ 0.7
ACTB-202ENST00000414620 NBPF12Q5TAG4 269 aaPredicted RBP19.45■□□□□ 0.7
ACTB-202ENST00000414620 REM2Q8IYK8 340 aaPredicted RBP19.45■□□□□ 0.7
ACTB-202ENST00000414620 API5Q9BZZ5 524 aaKnown RBP19.45■□□□□ 0.7
ACTB-202ENST00000414620 SIL1Q9H173 461 aa19.45■□□□□ 0.7
ACTB-202ENST00000414620 PPP2R3BQ9Y5P8 575 aa19.45■□□□□ 0.7
ACTB-202ENST00000414620 RASA3Q14644 834 aa19.44■□□□□ 0.7
ACTB-202ENST00000414620 PUM3Q15397 648 aaKnown RBP19.44■□□□□ 0.7
ACTB-202ENST00000414620 SPDYE2Q495Y8 402 aa19.44■□□□□ 0.7
ACTB-202ENST00000414620 ZNF70Q9UC06 446 aaPredicted RBP19.44■□□□□ 0.7
ACTB-202ENST00000414620 SERPINA10Q9UK55 444 aa19.44■□□□□ 0.7
ACTB-202ENST00000414620 LRRFIP2Q9Y608 721 aaKnown RBP19.44■□□□□ 0.7
ACTB-202ENST00000414620 TBC1D8O95759 1140 aa19.43■□□□□ 0.7
ACTB-202ENST00000414620 IFIT1P09914 478 aaKnown RBP19.43■□□□□ 0.7
ACTB-202ENST00000414620 FGFR2P21802 821 aa19.43■□□□□ 0.7
ACTB-202ENST00000414620 RARSP54136 660 aaKnown RBP19.43■□□□□ 0.7
ACTB-202ENST00000414620 LDLRAD1Q5T700 205 aa19.43■□□□□ 0.7
ACTB-202ENST00000414620 DZIP1LQ8IYY4 767 aaKnown RBP19.43■□□□□ 0.7
ACTB-202ENST00000414620 CLMNQ96JQ2 1002 aa19.43■□□□□ 0.7
ACTB-202ENST00000414620 AK9Q5TCS8 1911 aa19.43■□□□□ 0.7
ACTB-202ENST00000414620 TCP10L2B9ZVM9 353 aa19.42■□□□□ 0.7
ACTB-202ENST00000414620 PPP1R12BO60237 982 aaPredicted RBP19.42■□□□□ 0.7
ACTB-202ENST00000414620 SLC5A1P13866 664 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms