RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 VIL1P09327 827 aaKnown RBP37.5■■■■□ 3.59
CSNK1E-206ENST00000413574 RASGRF1Q13972 1273 aa37.5■■■■□ 3.59
CSNK1E-206ENST00000413574 SCARF1Q14162 830 aa37.5■■■■□ 3.59
CSNK1E-206ENST00000413574 DACT2Q5SW24 774 aa37.5■■■■□ 3.59
CSNK1E-206ENST00000413574 STRIP1Q5VSL9 837 aa37.5■■■■□ 3.59
CSNK1E-206ENST00000413574 ERICH6BQ5W0A0 696 aa37.5■■■■□ 3.59
CSNK1E-206ENST00000413574 OTUD7AQ8TE49 926 aaPredicted RBP37.5■■■■□ 3.59
CSNK1E-206ENST00000413574 LNPKQ9C0E8 428 aa37.5■■■■□ 3.59
CSNK1E-206ENST00000413574 ZBTB47Q9UFB7 747 aaPredicted RBP37.5■■■■□ 3.59
CSNK1E-206ENST00000413574 YY1P25490 414 aa37.49■■■■□ 3.59
CSNK1E-206ENST00000413574 ARID4AP29374 1257 aaPredicted RBP37.48■■■■□ 3.59
CSNK1E-206ENST00000413574 NUCB1Q02818 461 aa37.48■■■■□ 3.59
CSNK1E-206ENST00000413574 PI16Q6UXB8 463 aa37.48■■■■□ 3.59
CSNK1E-206ENST00000413574 AKAP11Q9UKA4 1901 aa37.48■■■■□ 3.59
CSNK1E-206ENST00000413574 FAM205AQ6ZU69 1335 aa37.48■■■■□ 3.59
CSNK1E-206ENST00000413574 KDM2BQ8NHM5 1336 aa37.48■■■■□ 3.59
CSNK1E-206ENST00000413574 MCAMP43121 646 aa37.46■■■■□ 3.59
CSNK1E-206ENST00000413574 RSBN1LQ6PCB5 846 aaPredicted RBP37.46■■■■□ 3.59
CSNK1E-206ENST00000413574 CHD1LQ86WJ1 897 aa37.46■■■■□ 3.59
CSNK1E-206ENST00000413574 CERS5Q8N5B7 392 aa37.46■■■■□ 3.59
CSNK1E-206ENST00000413574 UQCRFS1P1P0C7P4 283 aa37.45■■■■□ 3.59
CSNK1E-206ENST00000413574 GMPSP49915 693 aaPredicted RBP37.45■■■■□ 3.59
CSNK1E-206ENST00000413574 HMG20BQ9P0W2 317 aa37.45■■■■□ 3.59
CSNK1E-206ENST00000413574 DENND2AQ9ULE3 1009 aa37.45■■■■□ 3.59
CSNK1E-206ENST00000413574 SNRKQ9NRH2 765 aa37.44■■■■□ 3.58
CSNK1E-206ENST00000413574 PPP4R2Q9NY27 417 aa37.44■■■■□ 3.58
CSNK1E-206ENST00000413574 SEMA3EO15041 775 aa37.43■■■■□ 3.58
CSNK1E-206ENST00000413574 TSHZ3Q63HK5 1081 aa37.43■■■■□ 3.58
CSNK1E-206ENST00000413574 SPATA5Q8NB90 893 aa37.43■■■■□ 3.58
CSNK1E-206ENST00000413574 MFSD14BQ5SR56 506 aa37.42■■■■□ 3.58
CSNK1E-206ENST00000413574 ZNF512BQ96KM6 892 aaPredicted RBP37.42■■■■□ 3.58
CSNK1E-206ENST00000413574 NDUFB9Q9Y6M9 179 aa37.42■■■■□ 3.58
CSNK1E-206ENST00000413574 WDR90Q96KV7 1748 aa37.41■■■■□ 3.58
CSNK1E-206ENST00000413574 SHTN1A0MZ66 631 aa37.41■■■■□ 3.58
CSNK1E-206ENST00000413574 SCNN1DP51172 638 aa37.41■■■■□ 3.58
CSNK1E-206ENST00000413574 GRIK5Q16478 980 aa37.4■■■■□ 3.58
CSNK1E-206ENST00000413574 CENPQQ7L2Z9 268 aaPredicted RBP37.4■■■■□ 3.58
CSNK1E-206ENST00000413574 GMLQ99445 158 aa37.4■■■■□ 3.58
CSNK1E-206ENST00000413574 L3MBTL3Q96JM7 780 aaPredicted RBP37.39■■■■□ 3.58
CSNK1E-206ENST00000413574 SALL3Q9BXA9 1300 aa37.38■■■■□ 3.57
CSNK1E-206ENST00000413574 POTECB2RU33 542 aa37.38■■■■□ 3.57
CSNK1E-206ENST00000413574 ZBTB22O15209 634 aa37.38■■■■□ 3.57
CSNK1E-206ENST00000413574 KIAA0825Q8IV33 1275 aa37.38■■■■□ 3.57
CSNK1E-206ENST00000413574 AGBL3Q8NEM8 1001 aa37.38■■■■□ 3.57
CSNK1E-206ENST00000413574 ECHDC1Q9NTX5 307 aa37.38■■■■□ 3.57
CSNK1E-206ENST00000413574 F8W031 263 aaPredicted RBP37.37■■■■□ 3.57
CSNK1E-206ENST00000413574 WDR66Q8TBY9 1149 aa37.37■■■■□ 3.57
CSNK1E-206ENST00000413574 RRAGCQ9HB90 399 aa37.37■■■■□ 3.57
CSNK1E-206ENST00000413574 NMRK2Q9NPI5 230 aa37.37■■■■□ 3.57
CSNK1E-206ENST00000413574 MYO5AQ9Y4I1 1855 aaKnown RBP37.37■■■■□ 3.57
CSNK1E-206ENST00000413574 RPS12P25398 132 aaKnown RBP37.36■■■■□ 3.57
CSNK1E-206ENST00000413574 ZAP70P43403 619 aa37.36■■■■□ 3.57
CSNK1E-206ENST00000413574 TBC1D9Q6ZT07 1266 aa37.36■■■■□ 3.57
CSNK1E-206ENST00000413574 BOLA2Q9H3K6 86 aa37.36■■■■□ 3.57
CSNK1E-206ENST00000413574 PDS5AQ29RF7 1337 aaKnown RBP37.36■■■■□ 3.57
CSNK1E-206ENST00000413574 ATP5JP18859 108 aa37.36■■■■□ 3.57
CSNK1E-206ENST00000413574 MX1P20591 662 aa37.36■■■■□ 3.57
CSNK1E-206ENST00000413574 EPS15P42566 896 aa37.36■■■■□ 3.57
CSNK1E-206ENST00000413574 FKBP1AP62942 108 aaKnown RBP37.36■■■■□ 3.57
CSNK1E-206ENST00000413574 TBC1D22AQ8WUA7 517 aa37.36■■■■□ 3.57
CSNK1E-206ENST00000413574 GPRC5DQ9NZD1 345 aa37.36■■■■□ 3.57
CSNK1E-206ENST00000413574 CNOT7Q9UIV1 285 aaKnown RBP37.36■■■■□ 3.57
CSNK1E-206ENST00000413574 MYO3BQ8WXR4 1341 aa37.35■■■■□ 3.57
CSNK1E-206ENST00000413574 DPF2Q92785 391 aa37.35■■■■□ 3.57
CSNK1E-206ENST00000413574 SCN4AP35499 1836 aa37.35■■■■□ 3.57
CSNK1E-206ENST00000413574 MICALL2Q8IY33 904 aa37.34■■■■□ 3.57
CSNK1E-206ENST00000413574 GPATCH3Q96I76 525 aa37.34■■■■□ 3.57
CSNK1E-206ENST00000413574 CYP2E1P05181 493 aaPredicted RBP37.33■■■■□ 3.57
CSNK1E-206ENST00000413574 PDE4AP27815 886 aa37.33■■■■□ 3.57
CSNK1E-206ENST00000413574 ABCF2Q9UG63 623 aa37.33■■■■□ 3.57
CSNK1E-206ENST00000413574 SALL1Q9NSC2 1324 aa37.32■■■■□ 3.56
CSNK1E-206ENST00000413574 USP17L8P0C7I0 530 aa37.32■■■■□ 3.56
CSNK1E-206ENST00000413574 LMOD1P29536 600 aaPredicted RBP37.32■■■■□ 3.56
CSNK1E-206ENST00000413574 PRDX5P30044 214 aa37.32■■■■□ 3.56
CSNK1E-206ENST00000413574 PPIL4Q8WUA2 492 aaKnown RBP eCLIP37.32■■■■□ 3.56
CSNK1E-206ENST00000413574 DNAJC2Q99543 621 aaKnown RBP37.32■■■■□ 3.56
CSNK1E-206ENST00000413574 ANTXR1Q9H6X2 564 aa37.31■■■■□ 3.56
CSNK1E-206ENST00000413574 GPBP1L1Q9HC44 474 aaPredicted RBP37.31■■■■□ 3.56
CSNK1E-206ENST00000413574 HACL1Q9UJ83 578 aa37.31■■■■□ 3.56
CSNK1E-206ENST00000413574 TTC41PQ6P2S7 1318 aa37.3■■■■□ 3.56
CSNK1E-206ENST00000413574 PDE1AP54750 535 aa37.3■■■■□ 3.56
CSNK1E-206ENST00000413574 ZNF784Q8NCA9 323 aaPredicted RBP37.3■■■■□ 3.56
CSNK1E-206ENST00000413574 PI4K2BQ8TCG2 481 aa37.3■■■■□ 3.56
CSNK1E-206ENST00000413574 EDC3Q96F86 508 aaKnown RBP37.3■■■■□ 3.56
CSNK1E-206ENST00000413574 TTF2Q9UNY4 1162 aaKnown RBP37.3■■■■□ 3.56
CSNK1E-206ENST00000413574 ADAMTSL1Q8N6G6 1762 aa37.3■■■■□ 3.56
CSNK1E-206ENST00000413574 SKAP1Q86WV1 359 aa37.28■■■■□ 3.56
CSNK1E-206ENST00000413574 PLEKHM2Q8IWE5 1019 aa37.28■■■■□ 3.56
CSNK1E-206ENST00000413574 PIH1D3Q9NQM4 214 aaKnown RBP37.28■■■■□ 3.56
CSNK1E-206ENST00000413574 STAP2Q9UGK3 403 aa37.28■■■■□ 3.56
CSNK1E-206ENST00000413574 EGFRP00533 1210 aa37.28■■■■□ 3.56
CSNK1E-206ENST00000413574 SAMD7Q7Z3H4 446 aa37.28■■■■□ 3.56
CSNK1E-206ENST00000413574 HAUS7Q99871 368 aa37.28■■■■□ 3.56
CSNK1E-206ENST00000413574 VEGFAP15692 232 aaPredicted RBP37.27■■■■□ 3.56
CSNK1E-206ENST00000413574 IQCA1LA6NCM1 817 aa37.26■■■■□ 3.56
CSNK1E-206ENST00000413574 H7C1D1 291 aa37.26■■■■□ 3.56
CSNK1E-206ENST00000413574 GOLIM4O00461 696 aa37.26■■■■□ 3.56
CSNK1E-206ENST00000413574 LDHBP07195 334 aaKnown RBP37.26■■■■□ 3.56
CSNK1E-206ENST00000413574 ZNF280AP59817 542 aaPredicted RBP37.26■■■■□ 3.56
CSNK1E-206ENST00000413574 OGFOD1Q8N543 542 aa37.26■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms