RNA–Protein interactions for RNA: ENST00000412828.1

AC003087.1-201, humanhuman

TSL 3 BASIC

Gene AC003087.1, Length 499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003087.1-201ENST00000412828 SASH1O94885 1247 aa11.98□□□□□ -0.49
AC003087.1-201ENST00000412828 FMNL1O95466 1100 aaPredicted RBP11.98□□□□□ -0.49
AC003087.1-201ENST00000412828 HCLS1P14317 486 aaPredicted RBP11.98□□□□□ -0.49
AC003087.1-201ENST00000412828 SUPT20HL1Q3ZLR7 823 aa11.98□□□□□ -0.49
AC003087.1-201ENST00000412828 PAK6Q9NQU5 681 aaPredicted RBP11.98□□□□□ -0.49
AC003087.1-201ENST00000412828 ADGRA2Q96PE1 1338 aa11.97□□□□□ -0.49
AC003087.1-201ENST00000412828 GAS2L2Q8NHY3 880 aa11.97□□□□□ -0.49
AC003087.1-201ENST00000412828 NBPF3Q9H094 633 aa11.97□□□□□ -0.49
AC003087.1-201ENST00000412828 USP2O75604 605 aaPredicted RBP11.96□□□□□ -0.49
AC003087.1-201ENST00000412828 MDM2Q00987 491 aaPredicted RBP11.96□□□□□ -0.49
AC003087.1-201ENST00000412828 C17orf99Q6UX52 265 aa11.96□□□□□ -0.49
AC003087.1-201ENST00000412828 PODNQ7Z5L7 613 aa11.96□□□□□ -0.49
AC003087.1-201ENST00000412828 USP38Q8NB14 1042 aa11.96□□□□□ -0.49
AC003087.1-201ENST00000412828 TTYH1Q9H313 450 aaPredicted RBP11.96□□□□□ -0.49
AC003087.1-201ENST00000412828 ELP3Q9H9T3 547 aa11.96□□□□□ -0.49
AC003087.1-201ENST00000412828 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
AC003087.1-201ENST00000412828 MYO3BQ8WXR4 1341 aa11.95□□□□□ -0.5
AC003087.1-201ENST00000412828 PRKCZQ05513 592 aa11.95□□□□□ -0.5
AC003087.1-201ENST00000412828 PPP4R3CPQ6ZMV5 832 aa11.95□□□□□ -0.5
AC003087.1-201ENST00000412828 CELF1Q92879 486 aaKnown RBP11.95□□□□□ -0.5
AC003087.1-201ENST00000412828 LAMB2P55268 1798 aa11.95□□□□□ -0.5
AC003087.1-201ENST00000412828 UFL1O94874 794 aa11.94□□□□□ -0.5
AC003087.1-201ENST00000412828 INHAP05111 366 aa11.94□□□□□ -0.5
AC003087.1-201ENST00000412828 MRPS5P82675 430 aaKnown RBP11.94□□□□□ -0.5
AC003087.1-201ENST00000412828 TMEM31Q5JXX7 168 aa11.94□□□□□ -0.5
AC003087.1-201ENST00000412828 IL27Q8NEV9 243 aa11.94□□□□□ -0.5
AC003087.1-201ENST00000412828 PXYLP1Q8TE99 480 aa11.94□□□□□ -0.5
AC003087.1-201ENST00000412828 C11orf49Q9H6J7 331 aa11.94□□□□□ -0.5
AC003087.1-201ENST00000412828 PSME4Q14997 1843 aa11.94□□□□□ -0.5
AC003087.1-201ENST00000412828 PIEZO1Q92508 2521 aa11.93□□□□□ -0.5
AC003087.1-201ENST00000412828 ADCY3O60266 1144 aa11.93□□□□□ -0.5
AC003087.1-201ENST00000412828 SMAD3P84022 425 aaKnown RBP11.93□□□□□ -0.5
AC003087.1-201ENST00000412828 ZBED3Q96IU2 234 aaPredicted RBP11.93□□□□□ -0.5
AC003087.1-201ENST00000412828 THEGQ9P2T0 379 aa11.93□□□□□ -0.5
AC003087.1-201ENST00000412828 GGA1Q9UJY5 639 aa11.93□□□□□ -0.5
AC003087.1-201ENST00000412828 RRP7AQ9Y3A4 280 aaKnown RBP11.93□□□□□ -0.5
AC003087.1-201ENST00000412828 BTBD19C9JJ37 291 aa11.92□□□□□ -0.5
AC003087.1-201ENST00000412828 CETPP11597 493 aa11.92□□□□□ -0.5
AC003087.1-201ENST00000412828 FCGRTP55899 365 aa11.92□□□□□ -0.5
AC003087.1-201ENST00000412828 FOXK2Q01167 660 aa11.92□□□□□ -0.5
AC003087.1-201ENST00000412828 DACT2Q5SW24 774 aa11.92□□□□□ -0.5
AC003087.1-201ENST00000412828 MORC1Q86VD1 984 aa11.92□□□□□ -0.5
AC003087.1-201ENST00000412828 CPA4Q9UI42 421 aa11.92□□□□□ -0.5
AC003087.1-201ENST00000412828 ZNF804BA4D1E1 1349 aa11.91□□□□□ -0.5
AC003087.1-201ENST00000412828 SH3TC1Q8TE82 1336 aa11.91□□□□□ -0.5
AC003087.1-201ENST00000412828 MYL6BP14649 208 aa11.91□□□□□ -0.5
AC003087.1-201ENST00000412828 NBPF12Q5TAG4 269 aaPredicted RBP11.91□□□□□ -0.5
AC003087.1-201ENST00000412828 LBHD1Q9BQE6 289 aaPredicted RBP11.91□□□□□ -0.5
AC003087.1-201ENST00000412828 ANKIB1Q9P2G1 1089 aa11.91□□□□□ -0.5
AC003087.1-201ENST00000412828 GABRQQ9UN88 632 aa11.91□□□□□ -0.5
AC003087.1-201ENST00000412828 ELNP15502 786 aa11.9□□□□□ -0.5
AC003087.1-201ENST00000412828 SF3B3Q15393 1217 aaKnown RBP11.9□□□□□ -0.5
AC003087.1-201ENST00000412828 MTMR14Q8NCE2 650 aa11.9□□□□□ -0.5
AC003087.1-201ENST00000412828 MXD3Q9BW11 206 aa11.9□□□□□ -0.5
AC003087.1-201ENST00000412828 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.9□□□□□ -0.5
AC003087.1-201ENST00000412828 TRMT112Q9UI30 125 aaKnown RBP11.9□□□□□ -0.5
AC003087.1-201ENST00000412828 RPS8P62241 208 aaKnown RBP11.89□□□□□ -0.51
AC003087.1-201ENST00000412828 IRF5Q13568 498 aa11.89□□□□□ -0.51
AC003087.1-201ENST00000412828 STRIP1Q5VSL9 837 aa11.89□□□□□ -0.51
AC003087.1-201ENST00000412828 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.89□□□□□ -0.51
AC003087.1-201ENST00000412828 NLRP10Q86W26 655 aa11.89□□□□□ -0.51
AC003087.1-201ENST00000412828 EPHX3Q9H6B9 360 aa11.89□□□□□ -0.51
AC003087.1-201ENST00000412828 GPR37L1O60883 481 aa11.88□□□□□ -0.51
AC003087.1-201ENST00000412828 CDH23Q9H251 3354 aa11.88□□□□□ -0.51
AC003087.1-201ENST00000412828 FLT3LGP49771 235 aa11.87□□□□□ -0.51
AC003087.1-201ENST00000412828 SNAPC2Q13487 334 aa11.87□□□□□ -0.51
AC003087.1-201ENST00000412828 VGLL4Q14135 290 aa11.87□□□□□ -0.51
AC003087.1-201ENST00000412828 DLGAP5Q15398 846 aa11.87□□□□□ -0.51
AC003087.1-201ENST00000412828 HSP90AB3PQ58FF7 597 aa11.87□□□□□ -0.51
AC003087.1-201ENST00000412828 FBXW7Q969H0 707 aa11.87□□□□□ -0.51
AC003087.1-201ENST00000412828 CSADQ9Y600 493 aa11.87□□□□□ -0.51
AC003087.1-201ENST00000412828 PFASO15067 1338 aa11.86□□□□□ -0.51
AC003087.1-201ENST00000412828 SPDYE5A6NIY4 337 aa11.86□□□□□ -0.51
AC003087.1-201ENST00000412828 MYO1BO43795 1136 aa11.86□□□□□ -0.51
AC003087.1-201ENST00000412828 DIAPH1O60610 1272 aaKnown RBP11.86□□□□□ -0.51
AC003087.1-201ENST00000412828 MAP3K9P80192 1104 aa11.86□□□□□ -0.51
AC003087.1-201ENST00000412828 GRIN2CQ14957 1233 aa11.86□□□□□ -0.51
AC003087.1-201ENST00000412828 SHHQ15465 462 aa11.86□□□□□ -0.51
AC003087.1-201ENST00000412828 KIAA0825Q8IV33 1275 aa11.86□□□□□ -0.51
AC003087.1-201ENST00000412828 PPM1EQ8WY54 764 aa11.85□□□□□ -0.51
AC003087.1-201ENST00000412828 NECAB3Q96P71 396 aaPredicted RBP11.85□□□□□ -0.51
AC003087.1-201ENST00000412828 COL4A1P02462 1669 aa11.84□□□□□ -0.51
AC003087.1-201ENST00000412828 COL3A1P02461 1466 aaPredicted RBP11.84□□□□□ -0.51
AC003087.1-201ENST00000412828 DDX60LQ5H9U9 1706 aaKnown RBP11.84□□□□□ -0.51
AC003087.1-201ENST00000412828 ATP2B4P23634 1241 aa11.84□□□□□ -0.51
AC003087.1-201ENST00000412828 RASA3Q14644 834 aa11.84□□□□□ -0.51
AC003087.1-201ENST00000412828 AKNAD1Q5T1N1 836 aa11.84□□□□□ -0.51
AC003087.1-201ENST00000412828 ANKRD23Q86SG2 305 aa11.84□□□□□ -0.51
AC003087.1-201ENST00000412828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.84□□□□□ -0.51
AC003087.1-201ENST00000412828 OGDHLQ9ULD0 1010 aa11.84□□□□□ -0.51
AC003087.1-201ENST00000412828 OTOFQ9HC10 1997 aa11.84□□□□□ -0.51
AC003087.1-201ENST00000412828 CLRN2A0PK11 232 aa11.83□□□□□ -0.52
AC003087.1-201ENST00000412828 PDHXO00330 501 aa11.83□□□□□ -0.52
AC003087.1-201ENST00000412828 COL6A1P12109 1028 aa11.83□□□□□ -0.52
AC003087.1-201ENST00000412828 BMP1P13497 986 aa11.83□□□□□ -0.52
AC003087.1-201ENST00000412828 NHLH1Q02575 133 aa11.83□□□□□ -0.52
AC003087.1-201ENST00000412828 LRRC26Q2I0M4 334 aa11.83□□□□□ -0.52
AC003087.1-201ENST00000412828 ERO1BQ86YB8 467 aa11.83□□□□□ -0.52
AC003087.1-201ENST00000412828 RTF1Q92541 710 aaKnown RBP11.83□□□□□ -0.52
AC003087.1-201ENST00000412828 XDHP47989 1333 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms