RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CAP1Q01518 475 aa21.43■■□□□ 1.02
CHMP3-203ENST00000409225 SP3Q02447 781 aa21.43■■□□□ 1.02
CHMP3-203ENST00000409225 SUPT20HL1Q3ZLR7 823 aa21.43■■□□□ 1.02
CHMP3-203ENST00000409225 NBPF12Q5TAG4 269 aaPredicted RBP21.43■■□□□ 1.02
CHMP3-203ENST00000409225 MTMR14Q8NCE2 650 aa21.43■■□□□ 1.02
CHMP3-203ENST00000409225 MPHOSPH8Q99549 860 aa21.43■■□□□ 1.02
CHMP3-203ENST00000409225 VEZTQ9HBM0 779 aa21.43■■□□□ 1.02
CHMP3-203ENST00000409225 CD209Q9NNX6 404 aa21.43■■□□□ 1.02
CHMP3-203ENST00000409225 NEURL1BA8MQ27 555 aa21.42■■□□□ 1.02
CHMP3-203ENST00000409225 LAMB1P07942 1786 aa21.42■■□□□ 1.02
CHMP3-203ENST00000409225 IREB2P48200 963 aaKnown RBP21.42■■□□□ 1.02
CHMP3-203ENST00000409225 CFAP100Q494V2 611 aa21.42■■□□□ 1.02
CHMP3-203ENST00000409225 PTPN18Q99952 460 aa21.42■■□□□ 1.02
CHMP3-203ENST00000409225 TMEM106CQ9BVX2 250 aa21.42■■□□□ 1.02
CHMP3-203ENST00000409225 UNCXA6NJT0 531 aa21.41■■□□□ 1.02
CHMP3-203ENST00000409225 SNAP23O00161 211 aa21.41■■□□□ 1.02
CHMP3-203ENST00000409225 MYO1BO43795 1136 aa21.41■■□□□ 1.02
CHMP3-203ENST00000409225 CALD1Q05682 793 aaKnown RBP21.41■■□□□ 1.02
CHMP3-203ENST00000409225 CHRNDQ07001 517 aa21.41■■□□□ 1.02
CHMP3-203ENST00000409225 H7C1W4 665 aa21.4■■□□□ 1.02
CHMP3-203ENST00000409225 USP2O75604 605 aaPredicted RBP21.4■■□□□ 1.02
CHMP3-203ENST00000409225 TSPYL6Q8N831 410 aa21.4■■□□□ 1.02
CHMP3-203ENST00000409225 CHMP4AQ9BY43 222 aa21.4■■□□□ 1.02
CHMP3-203ENST00000409225 COLQQ9Y215 455 aaPredicted RBP21.4■■□□□ 1.02
CHMP3-203ENST00000409225 ECM29Q5VYK3 1845 aa21.39■■□□□ 1.02
CHMP3-203ENST00000409225 AOX1Q06278 1338 aa21.39■■□□□ 1.01
CHMP3-203ENST00000409225 BRCA2P51587 3418 aa21.39■■□□□ 1.01
CHMP3-203ENST00000409225 SPDYE2BA6NHP3 402 aa21.39■■□□□ 1.01
CHMP3-203ENST00000409225 APAF1O14727 1248 aa21.39■■□□□ 1.01
CHMP3-203ENST00000409225 SPDYE6P0CI01 402 aa21.39■■□□□ 1.01
CHMP3-203ENST00000409225 ANKRD13AQ8IZ07 590 aa21.39■■□□□ 1.01
CHMP3-203ENST00000409225 ZNF333Q96JL9 665 aa21.39■■□□□ 1.01
CHMP3-203ENST00000409225 PRMT6Q96LA8 375 aaPredicted RBP21.39■■□□□ 1.01
CHMP3-203ENST00000409225 ELP3Q9H9T3 547 aa21.39■■□□□ 1.01
CHMP3-203ENST00000409225 TESPA1A2RU30 521 aaPredicted RBP21.38■■□□□ 1.01
CHMP3-203ENST00000409225 RBM5P52756 815 aaKnown RBP eCLIP21.38■■□□□ 1.01
CHMP3-203ENST00000409225 JAG2Q9Y219 1238 aa21.38■■□□□ 1.01
CHMP3-203ENST00000409225 TAF5LO75529 589 aa21.37■■□□□ 1.01
CHMP3-203ENST00000409225 RASA3Q14644 834 aa21.37■■□□□ 1.01
CHMP3-203ENST00000409225 SLC9C1Q4G0N8 1177 aa21.37■■□□□ 1.01
CHMP3-203ENST00000409225 HELBQ8NG08 1087 aaPredicted RBP21.37■■□□□ 1.01
CHMP3-203ENST00000409225 OPTNQ96CV9 577 aa21.37■■□□□ 1.01
CHMP3-203ENST00000409225 PLA2G12BQ9BX93 195 aa21.37■■□□□ 1.01
CHMP3-203ENST00000409225 STK31Q9BXU1 1019 aa21.37■■□□□ 1.01
CHMP3-203ENST00000409225 PTCH2Q9Y6C5 1203 aa21.37■■□□□ 1.01
CHMP3-203ENST00000409225 IRS2Q9Y4H2 1338 aa21.36■■□□□ 1.01
CHMP3-203ENST00000409225 MYCP01106 439 aaPredicted RBP21.36■■□□□ 1.01
CHMP3-203ENST00000409225 SLC4A8Q2Y0W8 1093 aa21.36■■□□□ 1.01
CHMP3-203ENST00000409225 CSF1RP07333 972 aa21.35■■□□□ 1.01
CHMP3-203ENST00000409225 GCKRQ14397 625 aa21.35■■□□□ 1.01
CHMP3-203ENST00000409225 G2E3Q7L622 706 aa21.35■■□□□ 1.01
CHMP3-203ENST00000409225 ZNF804AQ7Z570 1209 aa21.35■■□□□ 1.01
CHMP3-203ENST00000409225 NBPF11Q86T75 865 aa21.35■■□□□ 1.01
CHMP3-203ENST00000409225 OTOFQ9HC10 1997 aa21.35■■□□□ 1.01
CHMP3-203ENST00000409225 ANKRD18BA2A2Z9 1011 aa21.34■■□□□ 1.01
CHMP3-203ENST00000409225 TAF1CQ15572 869 aaPredicted RBP21.34■■□□□ 1.01
CHMP3-203ENST00000409225 C15orf52Q6ZUT6 534 aaKnown RBP21.34■■□□□ 1.01
CHMP3-203ENST00000409225 CNKSR2Q8WXI2 1034 aa21.34■■□□□ 1.01
CHMP3-203ENST00000409225 MS4A4AQ96JQ5 239 aa21.34■■□□□ 1.01
CHMP3-203ENST00000409225 IL1R1P14778 569 aa21.33■■□□□ 1.01
CHMP3-203ENST00000409225 CASP7P55210 303 aa21.33■■□□□ 1.01
CHMP3-203ENST00000409225 FKBP1AP62942 108 aaKnown RBP21.33■■□□□ 1.01
CHMP3-203ENST00000409225 DDX10Q13206 875 aaKnown RBP21.33■■□□□ 1.01
CHMP3-203ENST00000409225 ARHGEF6Q15052 776 aa21.33■■□□□ 1.01
CHMP3-203ENST00000409225 BRI3BPQ8WY22 251 aa21.33■■□□□ 1.01
CHMP3-203ENST00000409225 ZFYVE28Q9HCC9 887 aa21.33■■□□□ 1.01
CHMP3-203ENST00000409225 CCL15-CCL14A0A0B4J2E2 113 aa21.32■■□□□ 1
CHMP3-203ENST00000409225 H0YGN5 161 aa21.32■■□□□ 1
CHMP3-203ENST00000409225 CCL15Q16663 113 aa21.32■■□□□ 1
CHMP3-203ENST00000409225 TSR2Q969E8 191 aaKnown RBP21.32■■□□□ 1
CHMP3-203ENST00000409225 CDAN1Q8IWY9 1227 aa21.31■■□□□ 1
CHMP3-203ENST00000409225 MYH16Q9H6N6 1097 aa21.31■■□□□ 1
CHMP3-203ENST00000409225 ZNF70Q9UC06 446 aaPredicted RBP21.31■■□□□ 1
CHMP3-203ENST00000409225 SLC4A2P04920 1241 aa21.3■■□□□ 1
CHMP3-203ENST00000409225 TNFAIP1Q13829 316 aa21.3■■□□□ 1
CHMP3-203ENST00000409225 SPDYE2Q495Y8 402 aa21.3■■□□□ 1
CHMP3-203ENST00000409225 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.3■■□□□ 1
CHMP3-203ENST00000409225 FAM43AQ8N2R8 423 aa21.3■■□□□ 1
CHMP3-203ENST00000409225 SH3TC2Q8TF17 1288 aa21.3■■□□□ 1
CHMP3-203ENST00000409225 CHMP3Q9Y3E7 222 aa21.3■■□□□ 1
CHMP3-203ENST00000409225 PLIN1O60240 522 aa21.29■■□□□ 1
CHMP3-203ENST00000409225 GTF2A2P52657 109 aa21.29■■□□□ 1
CHMP3-203ENST00000409225 IFIT5Q13325 482 aaKnown RBP21.29■■□□□ 1
CHMP3-203ENST00000409225 VGLL4Q14135 290 aa21.29■■□□□ 1
CHMP3-203ENST00000409225 TDRD3Q9H7E2 651 aaKnown RBP21.29■■□□□ 1
CHMP3-203ENST00000409225 A0A1B0GUL6 1792 aa21.28■■□□□ 1
CHMP3-203ENST00000409225 TRIOBPQ9H2D6 2365 aa21.28■■□□□ 1
CHMP3-203ENST00000409225 TCP10L2B9ZVM9 353 aa21.28■■□□□ 1
CHMP3-203ENST00000409225 OTUD5Q96G74 571 aa21.28■■□□□ 1
CHMP3-203ENST00000409225 ARHGAP39Q9C0H5 1083 aa21.28■■□□□ 1
CHMP3-203ENST00000409225 CEP290O15078 2479 aa21.27■■□□□ 1
CHMP3-203ENST00000409225 MAP3K9P80192 1104 aa21.27■■□□□ 1
CHMP3-203ENST00000409225 FLIIQ13045 1269 aa21.27■■□□□ 1
CHMP3-203ENST00000409225 TWISTNBQ3B726 338 aaPredicted RBP21.27■■□□□ 1
CHMP3-203ENST00000409225 CHRDL2Q6WN34 429 aa21.27■■□□□ 1
CHMP3-203ENST00000409225 DNAAF4Q8WXU2 420 aa21.27■■□□□ 1
CHMP3-203ENST00000409225 TEPSINQ96N21 525 aa21.27■■□□□ 1
CHMP3-203ENST00000409225 TMEM39BQ9GZU3 492 aa21.27■■□□□ 1
CHMP3-203ENST00000409225 TTF2Q9UNY4 1162 aaKnown RBP21.27■■□□□ 1
CHMP3-203ENST00000409225 CSADQ9Y600 493 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms