RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 FAM173BQ6P4H8 233 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 ALG1Q9BT22 464 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 ERVV-1B6SEH8 477 aa16.33■□□□□ 0.21
SCAF4-202ENST00000399804 ME3Q16798 604 aa16.33■□□□□ 0.21
SCAF4-202ENST00000399804 SLF2Q8IX21 1173 aa16.33■□□□□ 0.21
SCAF4-202ENST00000399804 FSIP1Q8NA03 581 aa16.33■□□□□ 0.21
SCAF4-202ENST00000399804 GIMAP6Q6P9H5 292 aa16.33■□□□□ 0.2
SCAF4-202ENST00000399804 TTLL11Q8NHH1 800 aa16.33■□□□□ 0.2
SCAF4-202ENST00000399804 DENND2AQ9ULE3 1009 aa16.33■□□□□ 0.2
SCAF4-202ENST00000399804 F8W031 263 aaPredicted RBP16.33■□□□□ 0.2
SCAF4-202ENST00000399804 HSPD1P10809 573 aaKnown RBP16.33■□□□□ 0.2
SCAF4-202ENST00000399804 BCAMP50895 628 aa16.33■□□□□ 0.2
SCAF4-202ENST00000399804 DSCC1Q9BVC3 393 aa16.33■□□□□ 0.2
SCAF4-202ENST00000399804 ZSWIM6Q9HCJ5 1215 aa16.33■□□□□ 0.2
SCAF4-202ENST00000399804 STX8Q9UNK0 236 aa16.33■□□□□ 0.2
SCAF4-202ENST00000399804 CTDP1Q9Y5B0 961 aaPredicted RBP16.33■□□□□ 0.2
SCAF4-202ENST00000399804 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.33■□□□□ 0.2
SCAF4-202ENST00000399804 CYP19A1P11511 503 aaPredicted RBP16.32■□□□□ 0.2
SCAF4-202ENST00000399804 PI16Q6UXB8 463 aa16.32■□□□□ 0.2
SCAF4-202ENST00000399804 MPHOSPH10O00566 681 aaKnown RBP16.32■□□□□ 0.2
SCAF4-202ENST00000399804 ZKSCAN3Q9BRR0 538 aa16.32■□□□□ 0.2
SCAF4-202ENST00000399804 TXLNAP40222 546 aa16.32■□□□□ 0.2
SCAF4-202ENST00000399804 ZNF804AQ7Z570 1209 aa16.32■□□□□ 0.2
SCAF4-202ENST00000399804 TMTC2Q8N394 836 aa16.32■□□□□ 0.2
SCAF4-202ENST00000399804 SMC2O95347 1197 aa16.31■□□□□ 0.2
SCAF4-202ENST00000399804 KIF13AQ9H1H9 1805 aa16.31■□□□□ 0.2
SCAF4-202ENST00000399804 PALLDQ8WX93 1383 aa16.31■□□□□ 0.2
SCAF4-202ENST00000399804 E7EWF7 191 aa16.31■□□□□ 0.2
SCAF4-202ENST00000399804 KCNQ2O43526 872 aa16.31■□□□□ 0.2
SCAF4-202ENST00000399804 GYG1P46976 350 aa16.31■□□□□ 0.2
SCAF4-202ENST00000399804 RTN1Q16799 776 aa16.31■□□□□ 0.2
SCAF4-202ENST00000399804 SUSD4Q5VX71 490 aa16.31■□□□□ 0.2
SCAF4-202ENST00000399804 ZC3H12CQ9C0D7 883 aaKnown RBP16.31■□□□□ 0.2
SCAF4-202ENST00000399804 DDX19AQ9NUU7 478 aaKnown RBP16.31■□□□□ 0.2
SCAF4-202ENST00000399804 HSP90AA2PQ14568 343 aaPredicted RBP16.31■□□□□ 0.2
SCAF4-202ENST00000399804 CEP57L1Q8IYX8 460 aa16.31■□□□□ 0.2
SCAF4-202ENST00000399804 CRACR2BQ8N4Y2 399 aaPredicted RBP16.31■□□□□ 0.2
SCAF4-202ENST00000399804 ANKRD20A12PQ8NF67 263 aa16.31■□□□□ 0.2
SCAF4-202ENST00000399804 MCM9Q9NXL9 1143 aa16.31■□□□□ 0.2
SCAF4-202ENST00000399804 NCOA3Q9Y6Q9 1424 aa16.31■□□□□ 0.2
SCAF4-202ENST00000399804 IFIT1BQ5T764 474 aaKnown RBP16.3■□□□□ 0.2
SCAF4-202ENST00000399804 ESPNB1AK53 854 aa16.3■□□□□ 0.2
SCAF4-202ENST00000399804 GSTO1P78417 241 aa16.3■□□□□ 0.2
SCAF4-202ENST00000399804 CHAMP1Q96JM3 812 aa16.3■□□□□ 0.2
SCAF4-202ENST00000399804 QTRT2Q9H974 415 aaKnown RBP16.3■□□□□ 0.2
SCAF4-202ENST00000399804 DCCP43146 1447 aa16.3■□□□□ 0.2
SCAF4-202ENST00000399804 CLSTN1O94985 981 aa16.3■□□□□ 0.2
SCAF4-202ENST00000399804 LDHBP07195 334 aaKnown RBP16.3■□□□□ 0.2
SCAF4-202ENST00000399804 PDE6AP16499 860 aa16.3■□□□□ 0.2
SCAF4-202ENST00000399804 CHRNDQ07001 517 aa16.3■□□□□ 0.2
SCAF4-202ENST00000399804 ZNF592Q92610 1267 aa16.3■□□□□ 0.2
SCAF4-202ENST00000399804 ISCA1Q9BUE6 129 aa16.3■□□□□ 0.2
SCAF4-202ENST00000399804 TPCN1Q9ULQ1 816 aa16.3■□□□□ 0.2
SCAF4-202ENST00000399804 RIMBP2O15034 1052 aa16.3■□□□□ 0.2
SCAF4-202ENST00000399804 JAK2O60674 1132 aa16.3■□□□□ 0.2
SCAF4-202ENST00000399804 BRD1O95696 1058 aa16.3■□□□□ 0.2
SCAF4-202ENST00000399804 UBE2Q2Q8WVN8 375 aa16.3■□□□□ 0.2
SCAF4-202ENST00000399804 CCAR1Q8IX12 1150 aaKnown RBP16.29■□□□□ 0.2
SCAF4-202ENST00000399804 CPDO75976 1380 aa16.29■□□□□ 0.2
SCAF4-202ENST00000399804 FGAP02671 866 aa16.29■□□□□ 0.2
SCAF4-202ENST00000399804 TPM1P09493 284 aa16.29■□□□□ 0.2
SCAF4-202ENST00000399804 LRSAM1Q6UWE0 723 aa16.29■□□□□ 0.2
SCAF4-202ENST00000399804 KAT14Q9H8E8 782 aa16.29■□□□□ 0.2
SCAF4-202ENST00000399804 DACT1Q9NYF0 836 aa16.29■□□□□ 0.2
SCAF4-202ENST00000399804 USP25Q9UHP3 1055 aa16.29■□□□□ 0.2
SCAF4-202ENST00000399804 TRPC5Q9UL62 973 aaPredicted RBP16.29■□□□□ 0.2
SCAF4-202ENST00000399804 ARID3AQ99856 593 aa16.29■□□□□ 0.2
SCAF4-202ENST00000399804 SHPRHQ149N8 1683 aa16.29■□□□□ 0.2
SCAF4-202ENST00000399804 CYP21A2P08686 494 aa16.28■□□□□ 0.2
SCAF4-202ENST00000399804 NLRP5P59047 1200 aa16.28■□□□□ 0.2
SCAF4-202ENST00000399804 ZMYM1Q5SVZ6 1142 aa16.28■□□□□ 0.2
SCAF4-202ENST00000399804 MEGF6O75095 1541 aa16.28■□□□□ 0.2
SCAF4-202ENST00000399804 UFL1O94874 794 aa16.28■□□□□ 0.2
SCAF4-202ENST00000399804 FAM196AQ6ZSG2 479 aa16.28■□□□□ 0.2
SCAF4-202ENST00000399804 PRDM1O75626 825 aa16.28■□□□□ 0.2
SCAF4-202ENST00000399804 TMOD2Q9NZR1 351 aa16.28■□□□□ 0.2
SCAF4-202ENST00000399804 ANGEL1Q9UNK9 670 aaKnown RBP16.28■□□□□ 0.2
SCAF4-202ENST00000399804 CEP131Q9UPN4 1083 aa16.28■□□□□ 0.2
SCAF4-202ENST00000399804 SNAP23O00161 211 aa16.27■□□□□ 0.2
SCAF4-202ENST00000399804 TSR1Q2NL82 804 aaKnown RBP16.27■□□□□ 0.2
SCAF4-202ENST00000399804 PXDNQ92626 1479 aa16.27■□□□□ 0.2
SCAF4-202ENST00000399804 FOXO4P98177 505 aa16.27■□□□□ 0.2
SCAF4-202ENST00000399804 KIF5BP33176 963 aa16.27■□□□□ 0.19
SCAF4-202ENST00000399804 SLFNL1Q499Z3 407 aa16.27■□□□□ 0.19
SCAF4-202ENST00000399804 VAT1LQ9HCJ6 419 aa16.27■□□□□ 0.19
SCAF4-202ENST00000399804 SRP68Q9UHB9 627 aaKnown RBP16.27■□□□□ 0.19
SCAF4-202ENST00000399804 CTDSPL2Q05D32 466 aa16.26■□□□□ 0.19
SCAF4-202ENST00000399804 TRIM28Q13263 835 aaKnown RBP16.26■□□□□ 0.19
SCAF4-202ENST00000399804 ERFEQ4G0M1 354 aa16.26■□□□□ 0.19
SCAF4-202ENST00000399804 PARP3Q9Y6F1 533 aa16.26■□□□□ 0.19
SCAF4-202ENST00000399804 RABL6Q3YEC7 729 aaPredicted RBP16.26■□□□□ 0.19
SCAF4-202ENST00000399804 LMBRD1Q9NUN5 540 aa16.26■□□□□ 0.19
SCAF4-202ENST00000399804 NKX1-1Q15270 411 aaPredicted RBP16.26■□□□□ 0.19
SCAF4-202ENST00000399804 OTUD7BQ6GQQ9 843 aa16.26■□□□□ 0.19
SCAF4-202ENST00000399804 PCMTD1Q96MG8 357 aaPredicted RBP16.26■□□□□ 0.19
SCAF4-202ENST00000399804 TSPY3P0CV98 308 aa16.26■□□□□ 0.19
SCAF4-202ENST00000399804 TSPY8P0CW00 308 aa16.26■□□□□ 0.19
SCAF4-202ENST00000399804 NECTIN1Q15223 517 aa16.26■□□□□ 0.19
SCAF4-202ENST00000399804 OSBP2Q969R2 916 aa16.26■□□□□ 0.19
SCAF4-202ENST00000399804 KIF2CQ99661 725 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms