RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 RNF113AO15541 343 aaKnown RBP13.81□□□□□ -0.2
ITSN1-211ENST00000399355 PRC1O43663 620 aa13.81□□□□□ -0.2
ITSN1-211ENST00000399355 COBLO75128 1261 aa13.81□□□□□ -0.2
ITSN1-211ENST00000399355 TCIRG1Q13488 830 aa13.81□□□□□ -0.2
ITSN1-211ENST00000399355 CLIC6Q96NY7 704 aa13.81□□□□□ -0.2
ITSN1-211ENST00000399355 KIAA2012Q0VF49 1180 aa13.8□□□□□ -0.2
ITSN1-211ENST00000399355 TTLL11Q8NHH1 800 aa13.8□□□□□ -0.2
ITSN1-211ENST00000399355 COL18A1P39060 1754 aa13.8□□□□□ -0.2
ITSN1-211ENST00000399355 IRS4O14654 1257 aaPredicted RBP13.8□□□□□ -0.2
ITSN1-211ENST00000399355 PRDM1O75626 825 aa13.8□□□□□ -0.2
ITSN1-211ENST00000399355 IL15P40933 162 aaPredicted RBP13.8□□□□□ -0.2
ITSN1-211ENST00000399355 BCAMP50895 628 aa13.8□□□□□ -0.2
ITSN1-211ENST00000399355 ATP2B3Q16720 1220 aa13.8□□□□□ -0.2
ITSN1-211ENST00000399355 MTMR7Q9Y216 660 aa13.8□□□□□ -0.2
ITSN1-211ENST00000399355 CCDC192P0DO97 292 aa13.8□□□□□ -0.2
ITSN1-211ENST00000399355 GUCY1A2P33402 732 aa13.8□□□□□ -0.2
ITSN1-211ENST00000399355 NDUFA8P51970 172 aa13.8□□□□□ -0.2
ITSN1-211ENST00000399355 C3orf67Q6ZVT6 689 aa13.8□□□□□ -0.2
ITSN1-211ENST00000399355 ARMT1Q9H993 441 aa13.8□□□□□ -0.2
ITSN1-211ENST00000399355 CDC27P30260 824 aa13.79□□□□□ -0.2
ITSN1-211ENST00000399355 FSIP1Q8NA03 581 aa13.79□□□□□ -0.2
ITSN1-211ENST00000399355 ATP6V1DQ9Y5K8 247 aa13.79□□□□□ -0.2
ITSN1-211ENST00000399355 ZNF500O60304 480 aaPredicted RBP13.79□□□□□ -0.2
ITSN1-211ENST00000399355 PHF14O94880 888 aa13.79□□□□□ -0.2
ITSN1-211ENST00000399355 GRIN1Q05586 938 aa13.79□□□□□ -0.2
ITSN1-211ENST00000399355 HPS5Q9UPZ3 1129 aa13.79□□□□□ -0.2
ITSN1-211ENST00000399355 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
ITSN1-211ENST00000399355 OVOS2A0A0G2JMS6 1433 aa13.79□□□□□ -0.2
ITSN1-211ENST00000399355 HIP1O00291 1037 aa13.79□□□□□ -0.2
ITSN1-211ENST00000399355 FOXN1O15353 648 aa13.79□□□□□ -0.2
ITSN1-211ENST00000399355 GLI3P10071 1580 aa13.79□□□□□ -0.2
ITSN1-211ENST00000399355 NLRP10Q86W26 655 aa13.79□□□□□ -0.2
ITSN1-211ENST00000399355 SDR42E1Q8WUS8 393 aa13.79□□□□□ -0.2
ITSN1-211ENST00000399355 TMX1Q9H3N1 280 aa13.79□□□□□ -0.2
ITSN1-211ENST00000399355 COL5A2P05997 1499 aaPredicted RBP13.78□□□□□ -0.2
ITSN1-211ENST00000399355 ZNF532Q9HCE3 1301 aa13.78□□□□□ -0.2
ITSN1-211ENST00000399355 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
ITSN1-211ENST00000399355 EXOSC10Q01780 885 aaKnown RBP13.78□□□□□ -0.2
ITSN1-211ENST00000399355 NEDD4P46934 1319 aa13.78□□□□□ -0.2
ITSN1-211ENST00000399355 ADAMTSL3P82987 1691 aa13.78□□□□□ -0.2
ITSN1-211ENST00000399355 CACTINQ8WUQ7 758 aaKnown RBP13.78□□□□□ -0.2
ITSN1-211ENST00000399355 CEP350Q5VT06 3117 aa13.78□□□□□ -0.2
ITSN1-211ENST00000399355 DPCR1Q3MIW9 517 aa13.78□□□□□ -0.2
ITSN1-211ENST00000399355 CCDC191Q8NCU4 936 aa13.78□□□□□ -0.2
ITSN1-211ENST00000399355 ABCF2Q9UG63 623 aa13.78□□□□□ -0.2
ITSN1-211ENST00000399355 PCDHA7Q9UN72 937 aa13.78□□□□□ -0.2
ITSN1-211ENST00000399355 CCDC158Q5M9N0 1113 aa13.77□□□□□ -0.2
ITSN1-211ENST00000399355 KCNJ14Q9UNX9 436 aa13.77□□□□□ -0.2
ITSN1-211ENST00000399355 COL4A1P02462 1669 aa13.77□□□□□ -0.2
ITSN1-211ENST00000399355 USP54Q70EL1 1684 aa13.77□□□□□ -0.2
ITSN1-211ENST00000399355 CARMIL3Q8ND23 1372 aa13.77□□□□□ -0.21
ITSN1-211ENST00000399355 CASP1P29466 404 aa13.77□□□□□ -0.21
ITSN1-211ENST00000399355 SNW1Q13573 536 aaKnown RBP13.77□□□□□ -0.21
ITSN1-211ENST00000399355 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.77□□□□□ -0.21
ITSN1-211ENST00000399355 ORC3Q9UBD5 711 aaPredicted RBP13.77□□□□□ -0.21
ITSN1-211ENST00000399355 KLRK1P26718 216 aa13.77□□□□□ -0.21
ITSN1-211ENST00000399355 ADGRA1Q86SQ6 560 aa13.77□□□□□ -0.21
ITSN1-211ENST00000399355 AOPEPQ8N6M6 819 aa13.77□□□□□ -0.21
ITSN1-211ENST00000399355 MAGEB6Q8N7X4 407 aa13.77□□□□□ -0.21
ITSN1-211ENST00000399355 PHRF1Q9P1Y6 1649 aaKnown RBP13.77□□□□□ -0.21
ITSN1-211ENST00000399355 CCDC102BQ68D86 513 aa13.76□□□□□ -0.21
ITSN1-211ENST00000399355 KIF6Q6ZMV9 814 aa13.76□□□□□ -0.21
ITSN1-211ENST00000399355 GRAMD1CQ8IYS0 662 aa13.76□□□□□ -0.21
ITSN1-211ENST00000399355 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
ITSN1-211ENST00000399355 ISCA1Q9BUE6 129 aa13.76□□□□□ -0.21
ITSN1-211ENST00000399355 FAM205CA6NFA0 338 aa13.76□□□□□ -0.21
ITSN1-211ENST00000399355 PIP4K2BP78356 416 aa13.76□□□□□ -0.21
ITSN1-211ENST00000399355 NOM1Q5C9Z4 860 aaKnown RBP13.76□□□□□ -0.21
ITSN1-211ENST00000399355 SUSD4Q5VX71 490 aa13.76□□□□□ -0.21
ITSN1-211ENST00000399355 PFKFB2O60825 505 aa13.76□□□□□ -0.21
ITSN1-211ENST00000399355 ZNF827Q17R98 1081 aa13.76□□□□□ -0.21
ITSN1-211ENST00000399355 DZIP3Q86Y13 1208 aaKnown RBP13.76□□□□□ -0.21
ITSN1-211ENST00000399355 FAM200AQ8TCP9 573 aa13.76□□□□□ -0.21
ITSN1-211ENST00000399355 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.76□□□□□ -0.211e-6■■■□□ 18
ITSN1-211ENST00000399355 WDHD1O75717 1129 aaPredicted RBP13.75□□□□□ -0.21
ITSN1-211ENST00000399355 SASS6Q6UVJ0 657 aa13.75□□□□□ -0.21
ITSN1-211ENST00000399355 MROH7-TTC4A0A0A0MT08 1334 aa13.75□□□□□ -0.21
ITSN1-211ENST00000399355 RASGRF1Q13972 1273 aa13.75□□□□□ -0.21
ITSN1-211ENST00000399355 PDILTQ8N807 584 aa13.75□□□□□ -0.21
ITSN1-211ENST00000399355 HMG20BQ9P0W2 317 aa13.75□□□□□ -0.21
ITSN1-211ENST00000399355 RIPOR2Q9Y4F9 1068 aa13.75□□□□□ -0.21
ITSN1-211ENST00000399355 KCPQ6ZWJ8 1503 aa13.75□□□□□ -0.21
ITSN1-211ENST00000399355 ATP1A3P13637 1013 aa13.75□□□□□ -0.21
ITSN1-211ENST00000399355 GYG1P46976 350 aa13.75□□□□□ -0.21
ITSN1-211ENST00000399355 SDF4Q9BRK5 362 aa13.75□□□□□ -0.21
ITSN1-211ENST00000399355 ZNF213O14771 459 aa13.74□□□□□ -0.21
ITSN1-211ENST00000399355 CPLX1O14810 134 aa13.74□□□□□ -0.21
ITSN1-211ENST00000399355 ANKRD1Q15327 319 aa13.74□□□□□ -0.21
ITSN1-211ENST00000399355 EPB41L4AQ9HCS5 686 aaPredicted RBP13.74□□□□□ -0.21
ITSN1-211ENST00000399355 MBD4O95243 580 aa13.74□□□□□ -0.21
ITSN1-211ENST00000399355 SF3A1Q15459 793 aaKnown RBP13.74□□□□□ -0.21
ITSN1-211ENST00000399355 GPR101Q96P66 508 aaPredicted RBP13.74□□□□□ -0.21
ITSN1-211ENST00000399355 CLSTN2Q9H4D0 955 aa13.74□□□□□ -0.21
ITSN1-211ENST00000399355 MINDY4BA8MYZ0 360 aa13.74□□□□□ -0.21
ITSN1-211ENST00000399355 RIOK3O14730 519 aaKnown RBP13.74□□□□□ -0.21
ITSN1-211ENST00000399355 PDCP20941 246 aa13.74□□□□□ -0.21
ITSN1-211ENST00000399355 AMIGO3Q86WK7 504 aa13.74□□□□□ -0.21
ITSN1-211ENST00000399355 HDAC5Q9UQL6 1122 aa13.74□□□□□ -0.21
ITSN1-211ENST00000399355 SH3TC1Q8TE82 1336 aa13.74□□□□□ -0.21
ITSN1-211ENST00000399355 NWD2Q9ULI1 1742 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms