RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CTDSPL2Q05D32 466 aa12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 NOLC1Q14978 699 aaKnown RBP eCLIP12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 ZBTB38Q8NAP3 1195 aaPredicted RBP12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 PGBD1Q96JS3 809 aa12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 ARMT1Q9H993 441 aa12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 ZNF532Q9HCE3 1301 aa12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 CASP7P55210 303 aa12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 METAP2P50579 478 aaKnown RBP eCLIP12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 TMEM67Q5HYA8 995 aa12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 NLRP10Q86W26 655 aa12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 APPBP2Q92624 585 aa12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 PDLIM2Q96JY6 352 aa12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 C16orf45Q96MC5 204 aaPredicted RBP12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 DSCC1Q9BVC3 393 aa12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 ZSCAN16Q9H4T2 348 aaPredicted RBP12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 A0A0U1RQG5 324 aaPredicted RBP12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 CCDC69A6NI79 296 aa12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 MBD4O95243 580 aa12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 TPM2P07951 284 aa12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 IGHMBP2P38935 993 aaKnown RBP12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 MCAMP43121 646 aa12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 UVSSAQ2YD98 709 aa12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 GIGYF2Q6Y7W6 1299 aaKnown RBP12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 NRBP1Q9UHY1 535 aa12.19□□□□□ -0.46
CPSF1P1-201ENST00000397477 FAM208AQ9UK61 1670 aaKnown RBP12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 CTSWP56202 376 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 LRMPQ12912 555 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 SLC26A6Q9BXS9 759 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 CLIP2Q9UDT6 1046 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 WWC3Q9ULE0 1092 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 PFKFB2O60825 505 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 PCCAP05165 728 aaPredicted RBP12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 DDB1Q16531 1140 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 CCDC102BQ68D86 513 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 ZSCAN25Q6NSZ9 544 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 TTLL11Q8NHH1 800 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 MAP3K15Q6ZN16 1313 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 ERICH2A1L162 156 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 GOLGA8AA7E2F4 631 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 ALG1Q9BT22 464 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 TRMT1Q9NXH9 659 aaKnown RBP12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 MRVI1Q9Y6F6 885 aa12.18□□□□□ -0.46
CPSF1P1-201ENST00000397477 hCG_1642624A0A1W2PR95 340 aa12.17□□□□□ -0.46
CPSF1P1-201ENST00000397477 SLC5A1P13866 664 aa12.17□□□□□ -0.46
CPSF1P1-201ENST00000397477 BCAMP50895 628 aa12.17□□□□□ -0.46
CPSF1P1-201ENST00000397477 MAP3K12Q12852 859 aa12.17□□□□□ -0.46
CPSF1P1-201ENST00000397477 SPECC1Q5M775 1068 aa12.17□□□□□ -0.46
CPSF1P1-201ENST00000397477 FAM182BQ5T319 152 aa12.17□□□□□ -0.46
CPSF1P1-201ENST00000397477 TMEM87AQ8NBN3 555 aa12.17□□□□□ -0.46
CPSF1P1-201ENST00000397477 RESTQ13127 1097 aa12.17□□□□□ -0.46
CPSF1P1-201ENST00000397477 TPD52L1Q16890 204 aaPredicted RBP12.17□□□□□ -0.46
CPSF1P1-201ENST00000397477 PIH1D3Q9NQM4 214 aaKnown RBP12.17□□□□□ -0.46
CPSF1P1-201ENST00000397477 ZFYP08048 801 aaPredicted RBP12.16□□□□□ -0.46
CPSF1P1-201ENST00000397477 HS1BP3Q53T59 392 aa12.16□□□□□ -0.46
CPSF1P1-201ENST00000397477 PRKAB2O43741 272 aa12.16□□□□□ -0.46
CPSF1P1-201ENST00000397477 PRDM1O75626 825 aa12.16□□□□□ -0.46
CPSF1P1-201ENST00000397477 AKAP17AQ02040 695 aaKnown RBP12.16□□□□□ -0.46
CPSF1P1-201ENST00000397477 AOPEPQ8N6M6 819 aa12.16□□□□□ -0.46
CPSF1P1-201ENST00000397477 PDILTQ8N807 584 aa12.16□□□□□ -0.46
CPSF1P1-201ENST00000397477 ISCA1Q9BUE6 129 aa12.16□□□□□ -0.46
CPSF1P1-201ENST00000397477 CLSTN2Q9H4D0 955 aa12.16□□□□□ -0.46
CPSF1P1-201ENST00000397477 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.16□□□□□ -0.46
CPSF1P1-201ENST00000397477 PYCARDQ9ULZ3 195 aa12.16□□□□□ -0.46
CPSF1P1-201ENST00000397477 SLC4A4Q9Y6R1 1079 aa12.16□□□□□ -0.46
CPSF1P1-201ENST00000397477 SLC12A7Q9Y666 1083 aa12.16□□□□□ -0.46
CPSF1P1-201ENST00000397477 CLIC4Q9Y696 253 aa12.16□□□□□ -0.46
CPSF1P1-201ENST00000397477 SH3TC1Q8TE82 1336 aa12.15□□□□□ -0.46
CPSF1P1-201ENST00000397477 AP5Z1O43299 807 aa12.15□□□□□ -0.46
CPSF1P1-201ENST00000397477 PDE8AO60658 829 aa12.15□□□□□ -0.46
CPSF1P1-201ENST00000397477 CTDNEP1O95476 244 aa12.15□□□□□ -0.46
CPSF1P1-201ENST00000397477 IARSP41252 1262 aaKnown RBP12.15□□□□□ -0.46
CPSF1P1-201ENST00000397477 USPL1Q5W0Q7 1092 aa12.15□□□□□ -0.46
CPSF1P1-201ENST00000397477 KCNB2Q92953 911 aa12.15□□□□□ -0.46
CPSF1P1-201ENST00000397477 ZBTB43O43298 467 aa12.15□□□□□ -0.46
CPSF1P1-201ENST00000397477 RANBP6O60518 1105 aaKnown RBP12.15□□□□□ -0.46
CPSF1P1-201ENST00000397477 PDE6AP16499 860 aa12.15□□□□□ -0.46
CPSF1P1-201ENST00000397477 PDE8BO95263 885 aa12.14□□□□□ -0.47
CPSF1P1-201ENST00000397477 CYP7A1P22680 504 aa12.14□□□□□ -0.47
CPSF1P1-201ENST00000397477 CEP57L1Q8IYX8 460 aa12.14□□□□□ -0.47
CPSF1P1-201ENST00000397477 UTP14AQ9BVJ6 771 aaKnown RBP12.14□□□□□ -0.47
CPSF1P1-201ENST00000397477 SAFBQ15424 915 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPSF1P1-201ENST00000397477 PTPN21Q16825 1174 aa12.14□□□□□ -0.47
CPSF1P1-201ENST00000397477 MRPS27Q92552 414 aaKnown RBP12.14□□□□□ -0.47
CPSF1P1-201ENST00000397477 NACAP1Q9BZK3 213 aa12.14□□□□□ -0.47
CPSF1P1-201ENST00000397477 SPTLC2O15270 562 aa12.14□□□□□ -0.47
CPSF1P1-201ENST00000397477 CIAO1O76071 339 aa12.14□□□□□ -0.47
CPSF1P1-201ENST00000397477 SUSD4Q5VX71 490 aa12.14□□□□□ -0.47
CPSF1P1-201ENST00000397477 C11orf57Q6ZUT1 292 aaPredicted RBP12.14□□□□□ -0.47
CPSF1P1-201ENST00000397477 UBAC1Q9BSL1 405 aa12.14□□□□□ -0.47
CPSF1P1-201ENST00000397477 SENP2Q9HC62 589 aa12.14□□□□□ -0.47
CPSF1P1-201ENST00000397477 TTF1Q15361 905 aaPredicted RBP12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 MFSD6Q6ZSS7 791 aa12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 SDR42E1Q8WUS8 393 aa12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 GOLPH3LQ9H4A5 285 aa12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 PCDHA7Q9UN72 937 aa12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 TCHHQ07283 1943 aa12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 UBE2Q2LH0YL09 131 aa12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 PDIA4P13667 645 aaKnown RBP12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 GYG1P46976 350 aa12.13□□□□□ -0.47
CPSF1P1-201ENST00000397477 SART3Q15020 963 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms