RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 SYTL4Q96C24 671 aaPredicted RBP18.54■□□□□ 0.56
ATP2A3-206ENST00000397043 CNNM1Q9NRU3 951 aa18.54■□□□□ 0.56
ATP2A3-206ENST00000397043 CTNNA3Q9UI47 895 aa18.54■□□□□ 0.56
ATP2A3-206ENST00000397043 RBM43Q6ZSC3 357 aaKnown RBP18.54■□□□□ 0.56
ATP2A3-206ENST00000397043 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.54■□□□□ 0.56
ATP2A3-206ENST00000397043 V9GYY5 206 aaPredicted RBP18.54■□□□□ 0.56
ATP2A3-206ENST00000397043 FDPSP14324 419 aaKnown RBP18.54■□□□□ 0.56
ATP2A3-206ENST00000397043 SNW1Q13573 536 aaKnown RBP18.54■□□□□ 0.56
ATP2A3-206ENST00000397043 LDHAL6AQ6ZMR3 332 aa18.54■□□□□ 0.56
ATP2A3-206ENST00000397043 CCDC112Q8NEF3 446 aa18.54■□□□□ 0.56
ATP2A3-206ENST00000397043 DENND2AQ9ULE3 1009 aa18.54■□□□□ 0.56
ATP2A3-206ENST00000397043 IQCB1Q15051 598 aa18.53■□□□□ 0.56
ATP2A3-206ENST00000397043 LRRFIP1Q32MZ4 808 aaKnown RBP18.53■□□□□ 0.56
ATP2A3-206ENST00000397043 TOMM22Q9NS69 142 aa18.53■□□□□ 0.56
ATP2A3-206ENST00000397043 U2AF2P26368 475 aaKnown RBP eCLIP18.53■□□□□ 0.56
ATP2A3-206ENST00000397043 AIFM3Q96NN9 605 aa18.53■□□□□ 0.56
ATP2A3-206ENST00000397043 CCDC69A6NI79 296 aa18.52■□□□□ 0.56
ATP2A3-206ENST00000397043 GPAA1O43292 621 aa18.52■□□□□ 0.56
ATP2A3-206ENST00000397043 ILDR1Q86SU0 546 aaPredicted RBP18.52■□□□□ 0.56
ATP2A3-206ENST00000397043 MICU3Q86XE3 530 aa18.52■□□□□ 0.56
ATP2A3-206ENST00000397043 ZNF274Q96GC6 653 aaPredicted RBP18.52■□□□□ 0.56
ATP2A3-206ENST00000397043 NAT10Q9H0A0 1025 aaKnown RBP18.52■□□□□ 0.56
ATP2A3-206ENST00000397043 PALLDQ8WX93 1383 aa18.52■□□□□ 0.56
ATP2A3-206ENST00000397043 USP27XA6NNY8 438 aa18.52■□□□□ 0.56
ATP2A3-206ENST00000397043 KIF6Q6ZMV9 814 aa18.52■□□□□ 0.56
ATP2A3-206ENST00000397043 NFXL1Q6ZNB6 911 aa18.52■□□□□ 0.56
ATP2A3-206ENST00000397043 AKAP2Q9Y2D5 859 aa18.52■□□□□ 0.56
ATP2A3-206ENST00000397043 PCDH11XQ9BZA7 1347 aa18.52■□□□□ 0.55
ATP2A3-206ENST00000397043 PCDH11YQ9BZA8 1340 aa18.52■□□□□ 0.55
ATP2A3-206ENST00000397043 DHX16O60231 1041 aaKnown RBP18.52■□□□□ 0.55
ATP2A3-206ENST00000397043 SLC9C2Q5TAH2 1124 aa18.52■□□□□ 0.55
ATP2A3-206ENST00000397043 LRRC8AQ8IWT6 810 aa18.52■□□□□ 0.55
ATP2A3-206ENST00000397043 HELBQ8NG08 1087 aaPredicted RBP18.52■□□□□ 0.55
ATP2A3-206ENST00000397043 NCOA7Q8NI08 942 aa18.52■□□□□ 0.55
ATP2A3-206ENST00000397043 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.51■□□□□ 0.55
ATP2A3-206ENST00000397043 TMOD3Q9NYL9 352 aa18.51■□□□□ 0.55
ATP2A3-206ENST00000397043 SPTLC2O15270 562 aa18.51■□□□□ 0.55
ATP2A3-206ENST00000397043 ATP2B3Q16720 1220 aa18.51■□□□□ 0.55
ATP2A3-206ENST00000397043 DPCR1Q3MIW9 517 aa18.51■□□□□ 0.55
ATP2A3-206ENST00000397043 CADPS2Q86UW7 1296 aa18.51■□□□□ 0.55
ATP2A3-206ENST00000397043 DNAJC10Q8IXB1 793 aa18.51■□□□□ 0.55
ATP2A3-206ENST00000397043 CEP135Q66GS9 1140 aa18.5■□□□□ 0.55
ATP2A3-206ENST00000397043 CCDC82Q8N4S0 544 aa18.5■□□□□ 0.55
ATP2A3-206ENST00000397043 CAVIN2O95810 425 aa18.5■□□□□ 0.55
ATP2A3-206ENST00000397043 GTF2F1P35269 517 aaKnown RBP eCLIP18.5■□□□□ 0.55
ATP2A3-206ENST00000397043 PHKBQ93100 1093 aa18.5■□□□□ 0.55
ATP2A3-206ENST00000397043 MYL10Q9BUA6 226 aa18.5■□□□□ 0.55
ATP2A3-206ENST00000397043 RFX7Q2KHR2 1363 aa18.5■□□□□ 0.55
ATP2A3-206ENST00000397043 HSPA2P54652 639 aa18.5■□□□□ 0.55
ATP2A3-206ENST00000397043 GPR108Q9NPR9 543 aa18.5■□□□□ 0.55
ATP2A3-206ENST00000397043 IGSF3O75054 1194 aa18.49■□□□□ 0.55
ATP2A3-206ENST00000397043 SLC3A2P08195 630 aaKnown RBP18.49■□□□□ 0.55
ATP2A3-206ENST00000397043 PTPN14Q15678 1187 aa18.49■□□□□ 0.55
ATP2A3-206ENST00000397043 ASAP1Q9ULH1 1129 aa18.49■□□□□ 0.55
ATP2A3-206ENST00000397043 TCIRG1Q13488 830 aa18.49■□□□□ 0.55
ATP2A3-206ENST00000397043 DHX40Q8IX18 779 aaKnown RBP18.49■□□□□ 0.55
ATP2A3-206ENST00000397043 AFDNP55196 1824 aaKnown RBP18.49■□□□□ 0.55
ATP2A3-206ENST00000397043 IL2RBP14784 551 aa18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 LMOD1P29536 600 aaPredicted RBP18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 HSP90AA4PQ58FG1 418 aa18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 RRP12Q5JTH9 1297 aaKnown RBP18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 TMC6Q7Z403 805 aa18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 LINC00301Q8NCQ3 95 aa18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 APPBP2Q92624 585 aa18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 INCENPQ9NQS7 918 aa18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 ADALQ6DHV7 355 aa18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 ENGASEQ8NFI3 743 aa18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 FBXO18Q8NFZ0 1043 aa18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 IFNKQ9P0W0 207 aa18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 ATP2B1P20020 1258 aa18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 PTPN21Q16825 1174 aa18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 MYSM1Q5VVJ2 828 aa18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.48■□□□□ 0.556e-7■■■□□ 18.7
ATP2A3-206ENST00000397043 GREM2Q9H772 168 aa18.48■□□□□ 0.55
ATP2A3-206ENST00000397043 B4E1Z4 1266 aa18.47■□□□□ 0.55
ATP2A3-206ENST00000397043 ITGA6P23229 1130 aa18.47■□□□□ 0.55
ATP2A3-206ENST00000397043 FMR1NBQ8N0W7 255 aaPredicted RBP18.47■□□□□ 0.55
ATP2A3-206ENST00000397043 ZHX1Q9UKY1 873 aaPredicted RBP18.47■□□□□ 0.55
ATP2A3-206ENST00000397043 KIF28PB7ZC32 967 aa18.47■□□□□ 0.55
ATP2A3-206ENST00000397043 METAP2P50579 478 aaKnown RBP eCLIP18.47■□□□□ 0.554e-6■□□□□ 8.2
ATP2A3-206ENST00000397043 KCNG4Q8TDN1 519 aa18.47■□□□□ 0.55
ATP2A3-206ENST00000397043 CHMP4CQ96CF2 233 aa18.47■□□□□ 0.55
ATP2A3-206ENST00000397043 ALG1Q9BT22 464 aa18.47■□□□□ 0.55
ATP2A3-206ENST00000397043 SNAP23O00161 211 aa18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 ZNF202O95125 648 aa18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 ZFYP08048 801 aaPredicted RBP18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 KLHL34Q8N239 644 aa18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 AGXT2Q9BYV1 514 aa18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 RTEL1Q9NZ71 1219 aa18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 KIAA1468Q9P260 1216 aa18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 MRC1P22897 1456 aa18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 SPATA31A3Q5VYP0 1347 aa18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 SMTNL1A8MU46 457 aa18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 CIAO1O76071 339 aa18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 TRMT112Q9UI30 125 aaKnown RBP18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 ERVV-2B6SEH9 535 aa18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 MCAMP43121 646 aa18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 ANTXR2P58335 489 aa18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 HLFQ16534 295 aa18.46■□□□□ 0.55
ATP2A3-206ENST00000397043 MRFAP1L1Q96HT8 127 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms