RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 ZFYP08048 801 aaPredicted RBP19.75■□□□□ 0.75
MCF2L-208ENST00000397030 ABCC11Q96J66 1382 aa19.75■□□□□ 0.75
MCF2L-208ENST00000397030 IL15P40933 162 aaPredicted RBP19.74■□□□□ 0.75
MCF2L-208ENST00000397030 PFDN4Q9NQP4 134 aa19.74■□□□□ 0.75
MCF2L-208ENST00000397030 USP25Q9UHP3 1055 aa19.74■□□□□ 0.75
MCF2L-208ENST00000397030 PLB1Q6P1J6 1458 aa19.74■□□□□ 0.75
MCF2L-208ENST00000397030 TFCP2Q12800 502 aa19.74■□□□□ 0.75
MCF2L-208ENST00000397030 PPP2R5DQ14738 602 aa19.74■□□□□ 0.75
MCF2L-208ENST00000397030 GEN1Q17RS7 908 aa19.74■□□□□ 0.75
MCF2L-208ENST00000397030 CCDC155Q8N6L0 562 aa19.74■□□□□ 0.75
MCF2L-208ENST00000397030 BBXQ8WY36 941 aaPredicted RBP19.74■□□□□ 0.75
MCF2L-208ENST00000397030 HMG20BQ9P0W2 317 aa19.74■□□□□ 0.75
MCF2L-208ENST00000397030 POLA1P09884 1462 aaPredicted RBP19.74■□□□□ 0.75
MCF2L-208ENST00000397030 SLC8A3P57103 927 aa19.74■□□□□ 0.75
MCF2L-208ENST00000397030 RAPGEF1Q13905 1077 aa19.74■□□□□ 0.75
MCF2L-208ENST00000397030 C16orf45Q96MC5 204 aaPredicted RBP19.74■□□□□ 0.75
MCF2L-208ENST00000397030 CWF19L2Q2TBE0 894 aaKnown RBP19.74■□□□□ 0.75
MCF2L-208ENST00000397030 PCDH11XQ9BZA7 1347 aa19.74■□□□□ 0.75
MCF2L-208ENST00000397030 PCDH11YQ9BZA8 1340 aa19.74■□□□□ 0.75
MCF2L-208ENST00000397030 CEP135Q66GS9 1140 aa19.74■□□□□ 0.75
MCF2L-208ENST00000397030 SRRTQ9BXP5 876 aaKnown RBP19.73■□□□□ 0.75
MCF2L-208ENST00000397030 MCM4P33991 863 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 CEP112Q8N8E3 955 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 GTF3C6Q969F1 213 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 PLEKHH1Q9ULM0 1364 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 ABL1P00519 1130 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 BMS1Q14692 1282 aaKnown RBP19.73■□□□□ 0.75
MCF2L-208ENST00000397030 CFAP58Q5T655 872 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 GADL1Q6ZQY3 521 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 AGTPBP1Q9UPW5 1226 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 CLSTN2Q9H4D0 955 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 RASAL2Q9UJF2 1139 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 C6orf163Q5TEZ5 329 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 IL27Q8NEV9 243 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 STRN3Q13033 797 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 MAP7D1Q3KQU3 841 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 HS2ST1Q7LGA3 356 aa19.73■□□□□ 0.75
MCF2L-208ENST00000397030 SMC1BQ8NDV3 1235 aa19.72■□□□□ 0.75
MCF2L-208ENST00000397030 DDX17Q92841 729 aaKnown RBP19.72■□□□□ 0.75
MCF2L-208ENST00000397030 TRPC3Q13507 836 aa19.72■□□□□ 0.75
MCF2L-208ENST00000397030 TTC6Q86TZ1 520 aa19.72■□□□□ 0.75
MCF2L-208ENST00000397030 ZFP91Q96JP5 570 aaPredicted RBP19.72■□□□□ 0.75
MCF2L-208ENST00000397030 BACH2Q9BYV9 841 aa19.72■□□□□ 0.75
MCF2L-208ENST00000397030 ZBED4O75132 1171 aa19.72■□□□□ 0.75
MCF2L-208ENST00000397030 CKAP4Q07065 602 aaKnown RBP19.72■□□□□ 0.75
MCF2L-208ENST00000397030 WDR44Q5JSH3 913 aa19.72■□□□□ 0.75
MCF2L-208ENST00000397030 NOP9Q86U38 636 aaKnown RBP19.72■□□□□ 0.75
MCF2L-208ENST00000397030 DPY19L2Q6NUT2 758 aa19.72■□□□□ 0.75
MCF2L-208ENST00000397030 H7C1D1 291 aa19.71■□□□□ 0.75
MCF2L-208ENST00000397030 PPIP5K2O43314 1243 aa19.71■□□□□ 0.75
MCF2L-208ENST00000397030 NMIQ13287 307 aaPredicted RBP19.71■□□□□ 0.75
MCF2L-208ENST00000397030 CCT6BQ92526 530 aa19.71■□□□□ 0.75
MCF2L-208ENST00000397030 DDX19AQ9NUU7 478 aaKnown RBP19.71■□□□□ 0.75
MCF2L-208ENST00000397030 RBM27Q9P2N5 1060 aaKnown RBP19.71■□□□□ 0.75
MCF2L-208ENST00000397030 SELENOOQ9BVL4 669 aa19.71■□□□□ 0.75
MCF2L-208ENST00000397030 NKTRP30414 1462 aaKnown RBP19.71■□□□□ 0.75
MCF2L-208ENST00000397030 FAM170AA1A519 330 aa19.71■□□□□ 0.75
MCF2L-208ENST00000397030 KRT19P08727 400 aa19.71■□□□□ 0.75
MCF2L-208ENST00000397030 LETM2Q2VYF4 491 aa19.71■□□□□ 0.75
MCF2L-208ENST00000397030 AZI2Q9H6S1 392 aa19.71■□□□□ 0.75
MCF2L-208ENST00000397030 TBC1D9Q6ZT07 1266 aa19.71■□□□□ 0.75
MCF2L-208ENST00000397030 HSF2BPO75031 334 aa19.7■□□□□ 0.74
MCF2L-208ENST00000397030 GNAT2P19087 354 aa19.7■□□□□ 0.74
MCF2L-208ENST00000397030 RBM8AQ9Y5S9 174 aaKnown RBP19.7■□□□□ 0.74
MCF2L-208ENST00000397030 TPD52P55327 224 aaPredicted RBP19.7■□□□□ 0.74
MCF2L-208ENST00000397030 UAP1Q16222 522 aaPredicted RBP19.7■□□□□ 0.74
MCF2L-208ENST00000397030 PDCL2Q8N4E4 241 aa19.7■□□□□ 0.74
MCF2L-208ENST00000397030 KSR2Q6VAB6 950 aa19.7■□□□□ 0.74
MCF2L-208ENST00000397030 MEIS3Q99687 375 aa19.7■□□□□ 0.74
MCF2L-208ENST00000397030 PLCH2O75038 1416 aa19.7■□□□□ 0.74
MCF2L-208ENST00000397030 HIBADHP31937 336 aaKnown RBP19.7■□□□□ 0.74
MCF2L-208ENST00000397030 UBASH3AP57075 661 aa19.7■□□□□ 0.74
MCF2L-208ENST00000397030 TTLL3Q9Y4R7 772 aa19.7■□□□□ 0.74
MCF2L-208ENST00000397030 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.7■□□□□ 0.747e-7■□□□□ 11.2
MCF2L-208ENST00000397030 E7EVH7 732 aa19.69■□□□□ 0.74
MCF2L-208ENST00000397030 PSMA7O14818 248 aa19.69■□□□□ 0.74
MCF2L-208ENST00000397030 IRX5P78411 483 aaPredicted RBP19.69■□□□□ 0.74
MCF2L-208ENST00000397030 SPATA24Q86W54 205 aa19.69■□□□□ 0.74
MCF2L-208ENST00000397030 FAM89AQ96GI7 184 aa19.69■□□□□ 0.74
MCF2L-208ENST00000397030 MBD4O95243 580 aa19.69■□□□□ 0.74
MCF2L-208ENST00000397030 NSMFQ6X4W1 530 aa19.69■□□□□ 0.74
MCF2L-208ENST00000397030 CCDC25Q86WR0 208 aa19.69■□□□□ 0.74
MCF2L-208ENST00000397030 IFT74Q96LB3 600 aa19.69■□□□□ 0.74
MCF2L-208ENST00000397030 ATP6V0A2Q9Y487 856 aa19.69■□□□□ 0.74
MCF2L-208ENST00000397030 STX17P56962 302 aa19.69■□□□□ 0.74
MCF2L-208ENST00000397030 C19orf44Q9H6X5 657 aa19.69■□□□□ 0.74
MCF2L-208ENST00000397030 DENND2AQ9ULE3 1009 aa19.69■□□□□ 0.74
MCF2L-208ENST00000397030 FRMD4BQ9Y2L6 1034 aa19.69■□□□□ 0.74
MCF2L-208ENST00000397030 CSADQ9Y600 493 aa19.69■□□□□ 0.74
MCF2L-208ENST00000397030 RNF113AO15541 343 aaKnown RBP19.68■□□□□ 0.74
MCF2L-208ENST00000397030 PKNOX2Q96KN3 472 aa19.68■□□□□ 0.74
MCF2L-208ENST00000397030 CCDC14Q49A88 953 aa19.68■□□□□ 0.74
MCF2L-208ENST00000397030 SPC25Q9HBM1 224 aa19.68■□□□□ 0.74
MCF2L-208ENST00000397030 IFRD2Q12894 506 aaPredicted RBP19.68■□□□□ 0.74
MCF2L-208ENST00000397030 AATFQ9NY61 560 aaKnown RBP eCLIP19.68■□□□□ 0.74
MCF2L-208ENST00000397030 CCT6AP40227 531 aaKnown RBP19.68■□□□□ 0.74
MCF2L-208ENST00000397030 APOBRQ0VD83 1088 aa19.68■□□□□ 0.74
MCF2L-208ENST00000397030 FBF1Q8TES7 1133 aa19.68■□□□□ 0.74
MCF2L-208ENST00000397030 CCNT1O60563 726 aaKnown RBP19.68■□□□□ 0.74
MCF2L-208ENST00000397030 SELENOSQ9BQE4 189 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms