RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 RILPL1Q5EBL4 403 aa17.78■□□□□ 0.44
GNE-202ENST00000396594 IBTKQ9P2D0 1353 aaPredicted RBP17.78■□□□□ 0.44
GNE-202ENST00000396594 KLHL10Q6JEL2 608 aa17.78■□□□□ 0.44
GNE-202ENST00000396594 CNBD1Q8NA66 436 aa17.78■□□□□ 0.44
GNE-202ENST00000396594 STX8Q9UNK0 236 aa17.78■□□□□ 0.44
GNE-202ENST00000396594 PREX2Q70Z35 1606 aa17.78■□□□□ 0.44
GNE-202ENST00000396594 RRP9O43818 475 aaKnown RBP17.78■□□□□ 0.44
GNE-202ENST00000396594 VWA3BQ502W6 1294 aa17.78■□□□□ 0.44
GNE-202ENST00000396594 RUFY3Q7L099 469 aa17.78■□□□□ 0.44
GNE-202ENST00000396594 HECW2Q9P2P5 1572 aa17.78■□□□□ 0.44
GNE-202ENST00000396594 HS2ST1Q7LGA3 356 aa17.78■□□□□ 0.44
GNE-202ENST00000396594 ARHGEF10LQ9HCE6 1279 aa17.78■□□□□ 0.44
GNE-202ENST00000396594 IDEP14735 1019 aa17.77■□□□□ 0.44
GNE-202ENST00000396594 SNX16P57768 344 aa17.77■□□□□ 0.44
GNE-202ENST00000396594 CTNNA2P26232 953 aa17.77■□□□□ 0.43
GNE-202ENST00000396594 NMIQ13287 307 aaPredicted RBP17.77■□□□□ 0.43
GNE-202ENST00000396594 TSNARE1Q96NA8 513 aa17.77■□□□□ 0.43
GNE-202ENST00000396594 CCDC87Q9NVE4 849 aa17.77■□□□□ 0.43
GNE-202ENST00000396594 YEATS2Q9ULM3 1422 aa17.77■□□□□ 0.43
GNE-202ENST00000396594 PATL2C9JE40 543 aaKnown RBP17.77■□□□□ 0.43
GNE-202ENST00000396594 CAMK4Q16566 473 aa17.77■□□□□ 0.43
GNE-202ENST00000396594 Q6ZUG5 572 aa17.77■□□□□ 0.43
GNE-202ENST00000396594 NFATC2IPQ8NCF5 419 aa17.76■□□□□ 0.43
GNE-202ENST00000396594 APPBP2Q92624 585 aa17.76■□□□□ 0.43
GNE-202ENST00000396594 TSGA10Q9BZW7 698 aa17.76■□□□□ 0.43
GNE-202ENST00000396594 N4BP3O15049 544 aa17.76■□□□□ 0.43
GNE-202ENST00000396594 IQUBQ8NA54 791 aa17.76■□□□□ 0.43
GNE-202ENST00000396594 SPTLC2O15270 562 aa17.76■□□□□ 0.43
GNE-202ENST00000396594 DEXIO95424 95 aa17.76■□□□□ 0.43
GNE-202ENST00000396594 ALDH1B1P30837 517 aa17.76■□□□□ 0.43
GNE-202ENST00000396594 TMEM87AQ8NBN3 555 aa17.76■□□□□ 0.43
GNE-202ENST00000396594 LPIN2Q92539 896 aa17.76■□□□□ 0.43
GNE-202ENST00000396594 CCDC102AQ96A19 550 aa17.76■□□□□ 0.43
GNE-202ENST00000396594 SAMM50Q9Y512 469 aa17.76■□□□□ 0.43
GNE-202ENST00000396594 PER1O15534 1290 aaPredicted RBP17.75■□□□□ 0.43
GNE-202ENST00000396594 PARP1P09874 1014 aaKnown RBP17.75■□□□□ 0.43
GNE-202ENST00000396594 HAUS3Q68CZ6 603 aa17.75■□□□□ 0.43
GNE-202ENST00000396594 IFFO1Q0D2I5 559 aa17.75■□□□□ 0.43
GNE-202ENST00000396594 CREB3L3Q68CJ9 461 aa17.75■□□□□ 0.43
GNE-202ENST00000396594 BICD1Q96G01 975 aa17.75■□□□□ 0.43
GNE-202ENST00000396594 SNRKQ9NRH2 765 aa17.75■□□□□ 0.43
GNE-202ENST00000396594 BRDTQ58F21 947 aaPredicted RBP17.75■□□□□ 0.43
GNE-202ENST00000396594 RRAGBQ5VZM2 374 aa17.74■□□□□ 0.43
GNE-202ENST00000396594 GSTTP1A0A1W2PQM5 241 aa17.74■□□□□ 0.43
GNE-202ENST00000396594 C8orf37Q96NL8 207 aa17.74■□□□□ 0.43
GNE-202ENST00000396594 SPAG5Q96R06 1193 aa17.74■□□□□ 0.43
GNE-202ENST00000396594 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
GNE-202ENST00000396594 CEP112Q8N8E3 955 aa17.74■□□□□ 0.43
GNE-202ENST00000396594 CCDC77Q9BR77 488 aa17.74■□□□□ 0.43
GNE-202ENST00000396594 GGA1Q9UJY5 639 aa17.74■□□□□ 0.43
GNE-202ENST00000396594 SNW1Q13573 536 aaKnown RBP17.74■□□□□ 0.43
GNE-202ENST00000396594 TFCP2L1Q9NZI6 479 aa17.74■□□□□ 0.43
GNE-202ENST00000396594 ELP1O95163 1332 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 PABPN1LA6NDY0 278 aaKnown RBP17.73■□□□□ 0.43
GNE-202ENST00000396594 TACC1O75410 805 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 IGHDP01880 384 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 DYDC1Q8WWB3 177 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 PODXL2Q9NZ53 605 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 EXOC7Q9UPT5 735 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 HIBADHP31937 336 aaKnown RBP17.73■□□□□ 0.43
GNE-202ENST00000396594 TCERG1LQ5VWI1 586 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 TMC6Q7Z403 805 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 HEATR3Q7Z4Q2 680 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.73■□□□□ 0.43
GNE-202ENST00000396594 CCDC65Q8IXS2 484 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 ANKARQ7Z5J8 1434 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 WDR78Q5VTH9 848 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 ADGRL3Q9HAR2 1447 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 FSD2A1L4K1 749 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 CHMLP26374 656 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.73■□□□□ 0.43
GNE-202ENST00000396594 TMOD4Q9NZQ9 345 aa17.73■□□□□ 0.43
GNE-202ENST00000396594 MAP2K1Q02750 393 aaPredicted RBP17.72■□□□□ 0.43
GNE-202ENST00000396594 TM6SF1Q9BZW5 370 aa17.72■□□□□ 0.43
GNE-202ENST00000396594 CEP83Q9Y592 693 aa17.72■□□□□ 0.43
GNE-202ENST00000396594 SAMD9LQ8IVG5 1584 aa17.72■□□□□ 0.43
GNE-202ENST00000396594 ATP2A1O14983 1001 aa17.72■□□□□ 0.43
GNE-202ENST00000396594 URI1O94763 535 aaPredicted RBP17.72■□□□□ 0.43
GNE-202ENST00000396594 SPECC1LQ69YQ0 1117 aa17.72■□□□□ 0.43
GNE-202ENST00000396594 DTHD1Q6ZMT9 781 aa17.72■□□□□ 0.43
GNE-202ENST00000396594 TAX1BP1Q86VP1 789 aa17.72■□□□□ 0.43
GNE-202ENST00000396594 AKR1B10O60218 316 aa17.72■□□□□ 0.43
GNE-202ENST00000396594 CCDC155Q8N6L0 562 aa17.72■□□□□ 0.43
GNE-202ENST00000396594 KIAA1524Q8TCG1 905 aa17.72■□□□□ 0.43
GNE-202ENST00000396594 JAKMIP2Q96AA8 810 aa17.72■□□□□ 0.43
GNE-202ENST00000396594 TNNT1P13805 278 aa17.72■□□□□ 0.43
GNE-202ENST00000396594 FAM13AO94988 1023 aa17.71■□□□□ 0.43
GNE-202ENST00000396594 MCM9Q9NXL9 1143 aa17.71■□□□□ 0.43
GNE-202ENST00000396594 CCNL1Q9UK58 526 aaPredicted RBP17.71■□□□□ 0.43
GNE-202ENST00000396594 UBASH3AP57075 661 aa17.71■□□□□ 0.43
GNE-202ENST00000396594 TNNI3KQ59H18 835 aa17.71■□□□□ 0.43
GNE-202ENST00000396594 FPGT-TNNI3KV9GXZ4 949 aa17.71■□□□□ 0.43
GNE-202ENST00000396594 HAND2P61296 217 aa17.71■□□□□ 0.43
GNE-202ENST00000396594 CARD14Q9BXL6 1004 aa17.71■□□□□ 0.43
GNE-202ENST00000396594 GUCY1B3Q02153 619 aa17.71■□□□□ 0.43
GNE-202ENST00000396594 KIAA0753Q2KHM9 967 aa17.71■□□□□ 0.43
GNE-202ENST00000396594 KRT25Q7Z3Z0 450 aa17.71■□□□□ 0.43
GNE-202ENST00000396594 KDRP35968 1356 aa17.71■□□□□ 0.43
GNE-202ENST00000396594 SEMA3EO15041 775 aa17.71■□□□□ 0.42
GNE-202ENST00000396594 KRT86O43790 486 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms