RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 EVI5LQ96CN4 794 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 MCAMP43121 646 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 RASGRF1Q13972 1273 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 SKAP1Q86WV1 359 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 LARGE2Q8N3Y3 721 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 TDRD7Q8NHU6 1098 aaKnown RBP11.99□□□□□ -0.49
DDX39B-202ENST00000396172 WDR66Q8TBY9 1149 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 TBC1D22AQ8WUA7 517 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 DNAJC2Q99543 621 aaKnown RBP11.99□□□□□ -0.49
DDX39B-202ENST00000396172 CD209Q9NNX6 404 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 PAG1Q9NWQ8 432 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 WWC3Q9ULE0 1092 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 HIP1O00291 1037 aa11.98□□□□□ -0.49
DDX39B-202ENST00000396172 RIMBP2O15034 1052 aa11.98□□□□□ -0.49
DDX39B-202ENST00000396172 AOC3Q16853 763 aa11.98□□□□□ -0.49
DDX39B-202ENST00000396172 TMED8Q6PL24 325 aaPredicted RBP11.98□□□□□ -0.49
DDX39B-202ENST00000396172 CASC1Q6TDU7 716 aa11.98□□□□□ -0.49
DDX39B-202ENST00000396172 TXNRD3Q86VQ6 643 aa11.98□□□□□ -0.49
DDX39B-202ENST00000396172 GPR101Q96P66 508 aaPredicted RBP11.98□□□□□ -0.49
DDX39B-202ENST00000396172 COL1A1P02452 1464 aaPredicted RBP11.98□□□□□ -0.49
DDX39B-202ENST00000396172 EIF5BO60841 1220 aaKnown RBP11.98□□□□□ -0.49
DDX39B-202ENST00000396172 GSPT1P15170 499 aaKnown RBP11.98□□□□□ -0.49
DDX39B-202ENST00000396172 NIM1KQ8IY84 436 aa11.98□□□□□ -0.49
DDX39B-202ENST00000396172 JDP2Q8WYK2 163 aa11.98□□□□□ -0.49
DDX39B-202ENST00000396172 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.98□□□□□ -0.493e-10■□□□□ 10.4
DDX39B-202ENST00000396172 HMG20BQ9P0W2 317 aa11.98□□□□□ -0.49
DDX39B-202ENST00000396172 SALL1Q9NSC2 1324 aa11.97□□□□□ -0.49
DDX39B-202ENST00000396172 CDK5RAP2Q96SN8 1893 aa11.97□□□□□ -0.49
DDX39B-202ENST00000396172 WTIPA6NIX2 430 aaPredicted RBP11.97□□□□□ -0.49
DDX39B-202ENST00000396172 NFKBIEO00221 500 aa11.97□□□□□ -0.49
DDX39B-202ENST00000396172 ECE2O60344 883 aa11.97□□□□□ -0.49
DDX39B-202ENST00000396172 GRIN3BO60391 1043 aa11.97□□□□□ -0.49
DDX39B-202ENST00000396172 SPTY2D1Q68D10 685 aaPredicted RBP11.97□□□□□ -0.49
DDX39B-202ENST00000396172 ZSCAN25Q6NSZ9 544 aa11.97□□□□□ -0.49
DDX39B-202ENST00000396172 RILPL2Q969X0 211 aa11.97□□□□□ -0.49
DDX39B-202ENST00000396172 ZNF277Q9NRM2 450 aaPredicted RBP11.97□□□□□ -0.49
DDX39B-202ENST00000396172 FAM205AQ6ZU69 1335 aa11.97□□□□□ -0.49
DDX39B-202ENST00000396172 FOCADQ5VW36 1801 aa11.97□□□□□ -0.49
DDX39B-202ENST00000396172 GOLIM4O00461 696 aa11.96□□□□□ -0.49
DDX39B-202ENST00000396172 ZAP70P43403 619 aa11.96□□□□□ -0.49
DDX39B-202ENST00000396172 KBTBD3Q8NAB2 608 aa11.96□□□□□ -0.49
DDX39B-202ENST00000396172 FSD1Q9BTV5 496 aa11.96□□□□□ -0.49
DDX39B-202ENST00000396172 SDSP20132 328 aa11.96□□□□□ -0.5
DDX39B-202ENST00000396172 SCARF1Q14162 830 aa11.96□□□□□ -0.5
DDX39B-202ENST00000396172 GPR162Q16538 588 aa11.96□□□□□ -0.5
DDX39B-202ENST00000396172 ARHGAP27Q6ZUM4 889 aa11.96□□□□□ -0.5
DDX39B-202ENST00000396172 IQSEC3Q9UPP2 1182 aaPredicted RBP11.96□□□□□ -0.5
DDX39B-202ENST00000396172 COL4A5P29400 1685 aa11.95□□□□□ -0.5
DDX39B-202ENST00000396172 DCAF8L1A6NGE4 600 aa11.95□□□□□ -0.5
DDX39B-202ENST00000396172 CDC45O75419 566 aa11.95□□□□□ -0.5
DDX39B-202ENST00000396172 ZFYP08048 801 aaPredicted RBP11.95□□□□□ -0.5
DDX39B-202ENST00000396172 LMNB1P20700 586 aa11.95□□□□□ -0.5
DDX39B-202ENST00000396172 FKBP1AP62942 108 aaKnown RBP11.95□□□□□ -0.5
DDX39B-202ENST00000396172 MAP3K12Q12852 859 aa11.95□□□□□ -0.5
DDX39B-202ENST00000396172 CHAF1AQ13111 956 aaPredicted RBP11.95□□□□□ -0.5
DDX39B-202ENST00000396172 DBNDD1Q9H9R9 158 aa11.95□□□□□ -0.5
DDX39B-202ENST00000396172 SNRKQ9NRH2 765 aa11.95□□□□□ -0.5
DDX39B-202ENST00000396172 SUGT1Q9Y2Z0 365 aa11.95□□□□□ -0.5
DDX39B-202ENST00000396172 MAST3O60307 1309 aa11.95□□□□□ -0.5
DDX39B-202ENST00000396172 MYO3BQ8WXR4 1341 aa11.95□□□□□ -0.5
DDX39B-202ENST00000396172 MAP4K4O95819 1239 aaPredicted RBP11.95□□□□□ -0.5
DDX39B-202ENST00000396172 CYP2E1P05181 493 aaPredicted RBP11.95□□□□□ -0.5
DDX39B-202ENST00000396172 DEKP35659 375 aaKnown RBP11.95□□□□□ -0.5
DDX39B-202ENST00000396172 RASSF7Q02833 373 aa11.95□□□□□ -0.5
DDX39B-202ENST00000396172 DOK7Q18PE1 504 aa11.95□□□□□ -0.5
DDX39B-202ENST00000396172 STRIP1Q5VSL9 837 aa11.95□□□□□ -0.5
DDX39B-202ENST00000396172 ZNRF3Q9ULT6 936 aa11.95□□□□□ -0.5
DDX39B-202ENST00000396172 YBX3P16989 372 aaKnown RBP eCLIP11.94□□□□□ -0.51e-8■□□□□ 8.9
DDX39B-202ENST00000396172 PI16Q6UXB8 463 aa11.94□□□□□ -0.5
DDX39B-202ENST00000396172 DIAPH3Q9NSV4 1193 aa11.94□□□□□ -0.5
DDX39B-202ENST00000396172 LRP2BPQ9P2M1 347 aa11.94□□□□□ -0.5
DDX39B-202ENST00000396172 USP17L3A6NCW0 530 aa11.93□□□□□ -0.5
DDX39B-202ENST00000396172 USP17L4A6NCW7 530 aa11.93□□□□□ -0.5
DDX39B-202ENST00000396172 TTLL5Q6EMB2 1281 aa11.93□□□□□ -0.5
DDX39B-202ENST00000396172 USP17L1Q7RTZ2 530 aa11.93□□□□□ -0.5
DDX39B-202ENST00000396172 RUFY2Q8WXA3 655 aa11.93□□□□□ -0.5
DDX39B-202ENST00000396172 FBXW7Q969H0 707 aa11.93□□□□□ -0.5
DDX39B-202ENST00000396172 NAV1Q8NEY1 1877 aa11.93□□□□□ -0.5
DDX39B-202ENST00000396172 LAMA4Q16363 1823 aa11.93□□□□□ -0.5
DDX39B-202ENST00000396172 RAD50Q92878 1312 aa11.93□□□□□ -0.5
DDX39B-202ENST00000396172 ZC3H4Q9UPT8 1303 aaKnown RBP11.93□□□□□ -0.5
DDX39B-202ENST00000396172 IDH1O75874 414 aaKnown RBP11.93□□□□□ -0.5
DDX39B-202ENST00000396172 LDHBP07195 334 aaKnown RBP11.93□□□□□ -0.5
DDX39B-202ENST00000396172 GTF2IP78347 998 aa11.93□□□□□ -0.5
DDX39B-202ENST00000396172 MFSD14BQ5SR56 506 aa11.93□□□□□ -0.5
DDX39B-202ENST00000396172 SLF2Q8IX21 1173 aa11.93□□□□□ -0.5
DDX39B-202ENST00000396172 ABCF2Q9UG63 623 aa11.93□□□□□ -0.5
DDX39B-202ENST00000396172 LAMB1P07942 1786 aa11.93□□□□□ -0.5
DDX39B-202ENST00000396172 EIF6P56537 245 aaKnown RBP11.92□□□□□ -0.5
DDX39B-202ENST00000396172 GSTO1P78417 241 aa11.92□□□□□ -0.5
DDX39B-202ENST00000396172 TNIP1Q15025 636 aa11.92□□□□□ -0.5
DDX39B-202ENST00000396172 DZIP1Q86YF9 867 aaKnown RBP11.92□□□□□ -0.5
DDX39B-202ENST00000396172 RAI14Q9P0K7 980 aa11.92□□□□□ -0.5
DDX39B-202ENST00000396172 NDUFB9Q9Y6M9 179 aa11.92□□□□□ -0.5
DDX39B-202ENST00000396172 SCN4AP35499 1836 aa11.92□□□□□ -0.5
DDX39B-202ENST00000396172 ADAMTSL1Q8N6G6 1762 aa11.92□□□□□ -0.5
DDX39B-202ENST00000396172 MYH1P12882 1939 aa11.92□□□□□ -0.5
DDX39B-202ENST00000396172 MMP14P50281 582 aa11.92□□□□□ -0.5
DDX39B-202ENST00000396172 EDC3Q96F86 508 aaKnown RBP11.92□□□□□ -0.5
DDX39B-202ENST00000396172 ANTXR1Q9H6X2 564 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms