RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 ADAM32Q8TC27 787 aa8.08□□□□□ -1.12
PTPN20-208ENST00000395727 TOR4AQ9NXH8 423 aa8.08□□□□□ -1.12
PTPN20-208ENST00000395727 COL11A2P13942 1736 aaPredicted RBP8.08□□□□□ -1.12
PTPN20-208ENST00000395727 RIC1Q4ADV7 1423 aa8.07□□□□□ -1.12
PTPN20-208ENST00000395727 GIGYF1O75420 1035 aaPredicted RBP8.07□□□□□ -1.12
PTPN20-208ENST00000395727 A1BGP04217 495 aa8.07□□□□□ -1.12
PTPN20-208ENST00000395727 SERPINB2P05120 415 aa8.07□□□□□ -1.12
PTPN20-208ENST00000395727 C1QTNF8P60827 252 aa8.07□□□□□ -1.12
PTPN20-208ENST00000395727 DALRD3Q5D0E6 543 aaKnown RBP8.07□□□□□ -1.12
PTPN20-208ENST00000395727 CDK15Q96Q40 435 aa8.07□□□□□ -1.12
PTPN20-208ENST00000395727 BCS1LQ9Y276 419 aa8.07□□□□□ -1.12
PTPN20-208ENST00000395727 USP16Q9Y5T5 823 aa8.07□□□□□ -1.12
PTPN20-208ENST00000395727 EIF4A1P60842 406 aaKnown RBP8.06□□□□□ -1.12
PTPN20-208ENST00000395727 LMOD3Q0VAK6 560 aa8.06□□□□□ -1.12
PTPN20-208ENST00000395727 DDX10Q13206 875 aaKnown RBP8.06□□□□□ -1.12
PTPN20-208ENST00000395727 DCTN1Q14203 1278 aa8.06□□□□□ -1.12
PTPN20-208ENST00000395727 TBC1D9BQ66K14 1250 aa8.06□□□□□ -1.12
PTPN20-208ENST00000395727 NPM2Q86SE8 214 aaKnown RBP8.06□□□□□ -1.12
PTPN20-208ENST00000395727 ZBTB33Q86T24 672 aa8.06□□□□□ -1.12
PTPN20-208ENST00000395727 DZIP3Q86Y13 1208 aaKnown RBP8.06□□□□□ -1.12
PTPN20-208ENST00000395727 SNIP1Q8TAD8 396 aaKnown RBP8.06□□□□□ -1.12
PTPN20-208ENST00000395727 BRIP1Q9BX63 1249 aa8.06□□□□□ -1.12
PTPN20-208ENST00000395727 PRKRIP1Q9H875 184 aaPredicted RBP8.06□□□□□ -1.12
PTPN20-208ENST00000395727 ZNF652Q9Y2D9 606 aa8.06□□□□□ -1.12
PTPN20-208ENST00000395727 IBTKQ9P2D0 1353 aaPredicted RBP8.06□□□□□ -1.12
PTPN20-208ENST00000395727 TNRC6CQ9HCJ0 1690 aaKnown RBP8.05□□□□□ -1.12
PTPN20-208ENST00000395727 PRAMEF22A3QJZ6 481 aa8.05□□□□□ -1.12
PTPN20-208ENST00000395727 CHRNA5P30532 468 aa8.05□□□□□ -1.12
PTPN20-208ENST00000395727 PDE6BP35913 854 aa8.05□□□□□ -1.12
PTPN20-208ENST00000395727 WASHC4Q2M389 1173 aa8.05□□□□□ -1.12
PTPN20-208ENST00000395727 PRR5LQ6MZQ0 368 aa8.05□□□□□ -1.12
PTPN20-208ENST00000395727 NBPF10Q6P3W6 841 aaKnown RBP8.05□□□□□ -1.12
PTPN20-208ENST00000395727 NBPF15Q8N660 670 aa8.05□□□□□ -1.12
PTPN20-208ENST00000395727 MAP4K5Q9Y4K4 846 aa8.05□□□□□ -1.12
PTPN20-208ENST00000395727 TLL2Q9Y6L7 1015 aa8.05□□□□□ -1.12
PTPN20-208ENST00000395727 SBF1O95248 1867 aa8.04□□□□□ -1.12
PTPN20-208ENST00000395727 KLRG2A4D1S0 409 aaPredicted RBP8.04□□□□□ -1.12
PTPN20-208ENST00000395727 ERVV-1B6SEH8 477 aa8.04□□□□□ -1.12
PTPN20-208ENST00000395727 ZEB1P37275 1124 aaPredicted RBP8.04□□□□□ -1.12
PTPN20-208ENST00000395727 TMPOP42166 694 aaKnown RBP8.04□□□□□ -1.12
PTPN20-208ENST00000395727 CYP4X1Q8N118 509 aa8.04□□□□□ -1.12
PTPN20-208ENST00000395727 TTLL6Q8N841 843 aa8.04□□□□□ -1.12
PTPN20-208ENST00000395727 CNBD1Q8NA66 436 aa8.04□□□□□ -1.12
PTPN20-208ENST00000395727 SETDB2Q96T68 719 aa8.04□□□□□ -1.12
PTPN20-208ENST00000395727 FER1L6Q2WGJ9 1857 aa8.04□□□□□ -1.12
PTPN20-208ENST00000395727 LTBP3Q9NS15 1303 aa8.03□□□□□ -1.12
PTPN20-208ENST00000395727 TIAM2Q8IVF5 1701 aa8.03□□□□□ -1.12
PTPN20-208ENST00000395727 H0YIN7 160 aa8.03□□□□□ -1.12
PTPN20-208ENST00000395727 NRG2O14511 850 aaPredicted RBP8.03□□□□□ -1.12
PTPN20-208ENST00000395727 GFRA3O60609 400 aa8.03□□□□□ -1.12
PTPN20-208ENST00000395727 RIPK4P57078 832 aa8.03□□□□□ -1.12
PTPN20-208ENST00000395727 ST5P78524 1137 aa8.03□□□□□ -1.12
PTPN20-208ENST00000395727 VAC14Q08AM6 782 aa8.03□□□□□ -1.12
PTPN20-208ENST00000395727 STYK1Q6J9G0 422 aa8.03□□□□□ -1.12
PTPN20-208ENST00000395727 ARHGAP27Q6ZUM4 889 aa8.03□□□□□ -1.12
PTPN20-208ENST00000395727 RUNDC1Q96C34 613 aa8.03□□□□□ -1.12
PTPN20-208ENST00000395727 SLC10A4Q96EP9 437 aa8.03□□□□□ -1.12
PTPN20-208ENST00000395727 NUP98P52948 1817 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 TTC24A2A3L6 582 aaPredicted RBP8.02□□□□□ -1.13
PTPN20-208ENST00000395727 J3QL48 77 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 HOXB7P09629 217 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 SMPD1P17405 629 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 GRM5P41594 1212 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 LAPTM4AQ15012 233 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 SOGA3Q5TF21 947 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 LRP10Q7Z4F1 713 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 C2CD5Q86YS7 1000 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 WWC1Q8IX03 1113 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 IRX2Q9BZI1 471 aaPredicted RBP8.02□□□□□ -1.13
PTPN20-208ENST00000395727 ZMYND15Q9H091 742 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 TSPYL4Q9UJ04 414 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 CDV3Q9UKY7 258 aaKnown RBP8.02□□□□□ -1.13
PTPN20-208ENST00000395727 WWC3Q9ULE0 1092 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 GOLGB1Q14789 3259 aaKnown RBP8.02□□□□□ -1.13
PTPN20-208ENST00000395727 ANKRD36CQ5JPF3 1778 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 RNF123Q5XPI4 1314 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 MAP3K15Q6ZN16 1313 aa8.02□□□□□ -1.13
PTPN20-208ENST00000395727 DICER1Q9UPY3 1922 aaKnown RBP8.01□□□□□ -1.13
PTPN20-208ENST00000395727 NFKBIEO00221 500 aa8.01□□□□□ -1.13
PTPN20-208ENST00000395727 CHL1O00533 1208 aa8.01□□□□□ -1.13
PTPN20-208ENST00000395727 ADH1CP00326 375 aa8.01□□□□□ -1.13
PTPN20-208ENST00000395727 ALDH1A1P00352 501 aa8.01□□□□□ -1.13
PTPN20-208ENST00000395727 SRGNP10124 158 aa8.01□□□□□ -1.13
PTPN20-208ENST00000395727 LMNB1P20700 586 aa8.01□□□□□ -1.13
PTPN20-208ENST00000395727 MCCD1P59942 119 aaPredicted RBP8.01□□□□□ -1.13
PTPN20-208ENST00000395727 WDR43Q15061 677 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTPN20-208ENST00000395727 C9orf131Q5VYM1 1079 aa8.01□□□□□ -1.13
PTPN20-208ENST00000395727 TPTE2Q6XPS3 522 aa8.01□□□□□ -1.13
PTPN20-208ENST00000395727 BICDL1Q6ZP65 573 aa8.01□□□□□ -1.13
PTPN20-208ENST00000395727 CNKSR1Q969H4 720 aa8.01□□□□□ -1.13
PTPN20-208ENST00000395727 THUMPD2Q9BTF0 503 aaKnown RBP8.01□□□□□ -1.13
PTPN20-208ENST00000395727 MIS18AQ9NYP9 233 aa8.01□□□□□ -1.13
PTPN20-208ENST00000395727 ZNF330Q9Y3S2 320 aaPredicted RBP8.01□□□□□ -1.13
PTPN20-208ENST00000395727 SNED1Q8TER0 1413 aa8.01□□□□□ -1.13
PTPN20-208ENST00000395727 KDM2BQ8NHM5 1336 aa8.01□□□□□ -1.13
PTPN20-208ENST00000395727 WDR90Q96KV7 1748 aa8□□□□□ -1.13
PTPN20-208ENST00000395727 NPR1P16066 1061 aa8□□□□□ -1.13
PTPN20-208ENST00000395727 PIP4K2AP48426 406 aaPredicted RBP8□□□□□ -1.13
PTPN20-208ENST00000395727 ARID5BQ14865 1188 aa8□□□□□ -1.13
PTPN20-208ENST00000395727 CRY2Q49AN0 593 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms