RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 GALNT12Q8IXK2 581 aa6.7□□□□□ -1.34
TRAV40-201ENST00000390467 ASAP3Q8TDY4 903 aa6.7□□□□□ -1.34
TRAV40-201ENST00000390467 OSGEPQ9NPF4 335 aa6.7□□□□□ -1.34
TRAV40-201ENST00000390467 SOX1O00570 391 aaPredicted RBP6.69□□□□□ -1.34
TRAV40-201ENST00000390467 NDUFB5O43674 189 aa6.69□□□□□ -1.34
TRAV40-201ENST00000390467 C19orf57Q0VDD7 668 aa6.69□□□□□ -1.34
TRAV40-201ENST00000390467 IKBKEQ14164 716 aa6.69□□□□□ -1.34
TRAV40-201ENST00000390467 ESRRAP11474 423 aaPredicted RBP6.68□□□□□ -1.34
TRAV40-201ENST00000390467 FSTP19883 344 aa6.68□□□□□ -1.34
TRAV40-201ENST00000390467 GRIA4P48058 902 aa6.68□□□□□ -1.34
TRAV40-201ENST00000390467 PREPP48147 710 aa6.68□□□□□ -1.34
TRAV40-201ENST00000390467 FAM46AQ96IP4 442 aaKnown RBP6.68□□□□□ -1.34
TRAV40-201ENST00000390467 TCF12Q99081 682 aa6.68□□□□□ -1.34
TRAV40-201ENST00000390467 DLGAP3O95886 979 aa6.67□□□□□ -1.34
TRAV40-201ENST00000390467 SPRED3Q2MJR0 410 aa6.67□□□□□ -1.34
TRAV40-201ENST00000390467 ARTNQ5T4W7 220 aa6.67□□□□□ -1.34
TRAV40-201ENST00000390467 CCNJLQ8IV13 435 aa6.67□□□□□ -1.34
TRAV40-201ENST00000390467 UTP4Q969X6 686 aaKnown RBP6.67□□□□□ -1.34
TRAV40-201ENST00000390467 CEP41Q9BYV8 373 aa6.67□□□□□ -1.34
TRAV40-201ENST00000390467 LOC100289279A0A1B0GTE1 492 aa6.66□□□□□ -1.34
TRAV40-201ENST00000390467 SOWAHDA6NJG2 315 aa6.66□□□□□ -1.34
TRAV40-201ENST00000390467 CCER1Q8TC90 406 aaPredicted RBP6.66□□□□□ -1.34
TRAV40-201ENST00000390467 RUSC1Q9BVN2 902 aa6.66□□□□□ -1.34
TRAV40-201ENST00000390467 USP26Q9BXU7 913 aa6.66□□□□□ -1.34
TRAV40-201ENST00000390467 NRSN2Q9GZP1 204 aa6.66□□□□□ -1.34
TRAV40-201ENST00000390467 LIN7BQ9HAP6 207 aa6.66□□□□□ -1.34
TRAV40-201ENST00000390467 NPHS2Q9NP85 383 aa6.66□□□□□ -1.34
TRAV40-201ENST00000390467 RAXQ9Y2V3 346 aa6.66□□□□□ -1.34
TRAV40-201ENST00000390467 LRP8Q14114 963 aa6.65□□□□□ -1.34
TRAV40-201ENST00000390467 UVSSAQ2YD98 709 aa6.65□□□□□ -1.34
TRAV40-201ENST00000390467 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.65□□□□□ -1.34
TRAV40-201ENST00000390467 MYRFLQ96LU7 910 aa6.65□□□□□ -1.34
TRAV40-201ENST00000390467 NIF3L1Q9GZT8 377 aa6.65□□□□□ -1.34
TRAV40-201ENST00000390467 RNF208Q9H0X6 261 aa6.65□□□□□ -1.34
TRAV40-201ENST00000390467 SOX17Q9H6I2 414 aaPredicted RBP6.65□□□□□ -1.34
TRAV40-201ENST00000390467 A0A096LPE4 126 aa6.64□□□□□ -1.35
TRAV40-201ENST00000390467 A0A1W2PPZ6 126 aa6.64□□□□□ -1.35
TRAV40-201ENST00000390467 DHX15O43143 795 aaKnown RBP6.64□□□□□ -1.35
TRAV40-201ENST00000390467 CPNE3O75131 537 aaKnown RBP6.64□□□□□ -1.35
TRAV40-201ENST00000390467 ARL4DP49703 201 aa6.64□□□□□ -1.35
TRAV40-201ENST00000390467 PDE3BQ13370 1112 aa6.64□□□□□ -1.35
TRAV40-201ENST00000390467 KIAA0319Q5VV43 1072 aa6.64□□□□□ -1.35
TRAV40-201ENST00000390467 ANKRD34AQ69YU3 496 aa6.64□□□□□ -1.35
TRAV40-201ENST00000390467 C7orf69Q9H7B7 122 aa6.64□□□□□ -1.35
TRAV40-201ENST00000390467 ZFP64Q9NPA5 681 aa6.64□□□□□ -1.35
TRAV40-201ENST00000390467 GNEQ9Y223 722 aaKnown RBP6.64□□□□□ -1.35
TRAV40-201ENST00000390467 EIF1AYO14602 144 aaKnown RBP6.63□□□□□ -1.35
TRAV40-201ENST00000390467 CTSBP07858 339 aa6.63□□□□□ -1.35
TRAV40-201ENST00000390467 GSTM4Q03013 218 aa6.63□□□□□ -1.35
TRAV40-201ENST00000390467 PCDH1Q08174 1060 aa6.63□□□□□ -1.35
TRAV40-201ENST00000390467 PDE4CQ08493 712 aa6.63□□□□□ -1.35
TRAV40-201ENST00000390467 ZNF423Q2M1K9 1284 aa6.63□□□□□ -1.35
TRAV40-201ENST00000390467 TRIM42Q8IWZ5 723 aa6.63□□□□□ -1.35
TRAV40-201ENST00000390467 FAM20CQ8IXL6 584 aa6.63□□□□□ -1.35
TRAV40-201ENST00000390467 CITED4Q96RK1 184 aa6.63□□□□□ -1.35
TRAV40-201ENST00000390467 TMPRSS13Q9BYE2 586 aa6.63□□□□□ -1.35
TRAV40-201ENST00000390467 CLEC4MQ9H2X3 399 aaPredicted RBP6.63□□□□□ -1.35
TRAV40-201ENST00000390467 RNF112Q9ULX5 631 aa6.63□□□□□ -1.35
TRAV40-201ENST00000390467 HMX2A2RU54 273 aa6.62□□□□□ -1.35
TRAV40-201ENST00000390467 HYAL3O43820 417 aaPredicted RBP6.62□□□□□ -1.35
TRAV40-201ENST00000390467 FDX2Q6P4F2 183 aa6.62□□□□□ -1.35
TRAV40-201ENST00000390467 TMC1Q8TDI8 760 aa6.62□□□□□ -1.35
TRAV40-201ENST00000390467 CCDC74AQ96AQ1 378 aa6.62□□□□□ -1.35
TRAV40-201ENST00000390467 RBCK1Q9BYM8 510 aa6.62□□□□□ -1.35
TRAV40-201ENST00000390467 ZNF576Q9H609 170 aa6.62□□□□□ -1.35
TRAV40-201ENST00000390467 ABCB6Q9NP58 842 aa6.62□□□□□ -1.35
TRAV40-201ENST00000390467 STOML1Q9UBI4 398 aa6.62□□□□□ -1.35
TRAV40-201ENST00000390467 MEGF11A6BM72 1044 aa6.61□□□□□ -1.35
TRAV40-201ENST00000390467 SART1O43290 800 aaKnown RBP6.61□□□□□ -1.35
TRAV40-201ENST00000390467 TIAF1O95411 115 aa6.61□□□□□ -1.35
TRAV40-201ENST00000390467 BRD1O95696 1058 aa6.61□□□□□ -1.35
TRAV40-201ENST00000390467 IGLV1-40P01703 118 aa6.61□□□□□ -1.35
TRAV40-201ENST00000390467 NEFLP07196 543 aa6.61□□□□□ -1.35
TRAV40-201ENST00000390467 BMP3P12645 472 aa6.61□□□□□ -1.35
TRAV40-201ENST00000390467 SGO2Q562F6 1265 aa6.61□□□□□ -1.35
TRAV40-201ENST00000390467 TMC7Q7Z402 723 aa6.61□□□□□ -1.35
TRAV40-201ENST00000390467 ALKBH8Q96BT7 664 aaKnown RBP6.61□□□□□ -1.35
TRAV40-201ENST00000390467 CSRNP1Q96S65 589 aa6.61□□□□□ -1.35
TRAV40-201ENST00000390467 TRIM56Q9BRZ2 755 aaKnown RBP6.61□□□□□ -1.35
TRAV40-201ENST00000390467 EHD4Q9H223 541 aa6.61□□□□□ -1.35
TRAV40-201ENST00000390467 ECEL1O95672 775 aa6.6□□□□□ -1.35
TRAV40-201ENST00000390467 B3GALT4O96024 378 aa6.6□□□□□ -1.35
TRAV40-201ENST00000390467 ITPKAP23677 461 aa6.6□□□□□ -1.35
TRAV40-201ENST00000390467 PRPF40BQ6NWY9 871 aaKnown RBP6.6□□□□□ -1.35
TRAV40-201ENST00000390467 PI16Q6UXB8 463 aa6.6□□□□□ -1.35
TRAV40-201ENST00000390467 SMG8Q8ND04 991 aaKnown RBP6.6□□□□□ -1.35
TRAV40-201ENST00000390467 GLIS3Q8NEA6 775 aa6.6□□□□□ -1.35
TRAV40-201ENST00000390467 EPS8L3Q8TE67 593 aaKnown RBP6.6□□□□□ -1.35
TRAV40-201ENST00000390467 DMRTB1Q96MA1 342 aa6.6□□□□□ -1.35
TRAV40-201ENST00000390467 DNAJC25Q9H1X3 360 aa6.6□□□□□ -1.35
TRAV40-201ENST00000390467 SUGCTQ9HAC7 445 aa6.6□□□□□ -1.35
TRAV40-201ENST00000390467 BIN2Q9UBW5 565 aaPredicted RBP6.6□□□□□ -1.35
TRAV40-201ENST00000390467 GAS2O43903 313 aaKnown RBP6.59□□□□□ -1.35
TRAV40-201ENST00000390467 TGFB1P01137 390 aa6.59□□□□□ -1.35
TRAV40-201ENST00000390467 DRD2P14416 443 aa6.59□□□□□ -1.35
TRAV40-201ENST00000390467 NFIAQ12857 509 aa6.59□□□□□ -1.35
TRAV40-201ENST00000390467 NUTM2GQ5VZR2 741 aa6.59□□□□□ -1.35
TRAV40-201ENST00000390467 BEND4Q6ZU67 534 aa6.59□□□□□ -1.35
TRAV40-201ENST00000390467 ZDHHC13Q8IUH4 622 aa6.59□□□□□ -1.35
TRAV40-201ENST00000390467 KCNF1Q9H3M0 494 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms