RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 FNBP4Q8N3X1 1017 aaPredicted RBP16.73■□□□□ 0.27
PSME4-201ENST00000389993 MYO1BO43795 1136 aa16.73■□□□□ 0.27
PSME4-201ENST00000389993 APBA3O96018 575 aa16.73■□□□□ 0.27
PSME4-201ENST00000389993 TTC12Q9H892 705 aaPredicted RBP16.73■□□□□ 0.27
PSME4-201ENST00000389993 ZNF335Q9H4Z2 1342 aaPredicted RBP16.73■□□□□ 0.27
PSME4-201ENST00000389993 LRSAM1Q6UWE0 723 aa16.73■□□□□ 0.27
PSME4-201ENST00000389993 OGFOD1Q8N543 542 aa16.73■□□□□ 0.27
PSME4-201ENST00000389993 TSG101Q99816 390 aa16.73■□□□□ 0.27
PSME4-201ENST00000389993 PALD1Q9ULE6 856 aa16.73■□□□□ 0.27
PSME4-201ENST00000389993 CCP110O43303 1012 aa16.73■□□□□ 0.27
PSME4-201ENST00000389993 ZNF532Q9HCE3 1301 aa16.72■□□□□ 0.27
PSME4-201ENST00000389993 GADD45BO75293 160 aaPredicted RBP16.72■□□□□ 0.27
PSME4-201ENST00000389993 RPS6KB1P23443 525 aa16.72■□□□□ 0.27
PSME4-201ENST00000389993 TERF1P54274 439 aa16.72■□□□□ 0.27
PSME4-201ENST00000389993 CCDC40Q4G0X9 1142 aa16.72■□□□□ 0.27
PSME4-201ENST00000389993 ERICH4A6NGS2 130 aa16.72■□□□□ 0.27
PSME4-201ENST00000389993 HIBADHP31937 336 aaKnown RBP16.72■□□□□ 0.27
PSME4-201ENST00000389993 PUM3Q15397 648 aaKnown RBP16.72■□□□□ 0.27
PSME4-201ENST00000389993 UNC5CLQ8IV45 518 aa16.72■□□□□ 0.27
PSME4-201ENST00000389993 CASQ1P31415 396 aa16.72■□□□□ 0.27
PSME4-201ENST00000389993 BCAMP50895 628 aa16.72■□□□□ 0.27
PSME4-201ENST00000389993 CCDC191Q8NCU4 936 aa16.72■□□□□ 0.27
PSME4-201ENST00000389993 ARID5AQ03989 594 aa16.72■□□□□ 0.27
PSME4-201ENST00000389993 MAPK8IP1Q9UQF2 711 aa16.72■□□□□ 0.27
PSME4-201ENST00000389993 FKBP15Q5T1M5 1219 aa16.72■□□□□ 0.27
PSME4-201ENST00000389993 PLA2R1Q13018 1463 aa16.72■□□□□ 0.27
PSME4-201ENST00000389993 A0A0D9SFI3 127 aa16.71■□□□□ 0.27
PSME4-201ENST00000389993 MAPKAPK5Q8IW41 473 aa16.71■□□□□ 0.27
PSME4-201ENST00000389993 SYCP3Q8IZU3 236 aa16.71■□□□□ 0.27
PSME4-201ENST00000389993 DRC1Q96MC2 740 aa16.71■□□□□ 0.27
PSME4-201ENST00000389993 MACROD2A1Z1Q3 448 aa16.71■□□□□ 0.27
PSME4-201ENST00000389993 ADORA1P30542 326 aa16.71■□□□□ 0.27
PSME4-201ENST00000389993 LUZP1Q86V48 1076 aa16.71■□□□□ 0.27
PSME4-201ENST00000389993 TEX11Q8IYF3 940 aa16.71■□□□□ 0.27
PSME4-201ENST00000389993 ZNF397Q8NF99 534 aaPredicted RBP16.71■□□□□ 0.27
PSME4-201ENST00000389993 TRIM47Q96LD4 638 aa16.71■□□□□ 0.27
PSME4-201ENST00000389993 CNNM2Q9H8M5 875 aa16.71■□□□□ 0.27
PSME4-201ENST00000389993 TAX1BP1Q86VP1 789 aa16.71■□□□□ 0.27
PSME4-201ENST00000389993 SDR42E1Q8WUS8 393 aa16.71■□□□□ 0.27
PSME4-201ENST00000389993 PKP1Q13835 747 aa16.71■□□□□ 0.26
PSME4-201ENST00000389993 KIF4BQ2VIQ3 1234 aa16.7■□□□□ 0.26
PSME4-201ENST00000389993 SNX21Q969T3 373 aa16.7■□□□□ 0.26
PSME4-201ENST00000389993 EAF2Q96CJ1 260 aaPredicted RBP16.7■□□□□ 0.26
PSME4-201ENST00000389993 KDM5DQ9BY66 1539 aa16.7■□□□□ 0.26
PSME4-201ENST00000389993 CBX1P83916 185 aa16.7■□□□□ 0.26
PSME4-201ENST00000389993 SMIM5Q71RC9 77 aa16.7■□□□□ 0.26
PSME4-201ENST00000389993 ZSCAN16Q9H4T2 348 aaPredicted RBP16.7■□□□□ 0.26
PSME4-201ENST00000389993 RBM17Q96I25 401 aaKnown RBP16.7■□□□□ 0.26
PSME4-201ENST00000389993 HECW2Q9P2P5 1572 aa16.7■□□□□ 0.26
PSME4-201ENST00000389993 DOK7Q18PE1 504 aa16.7■□□□□ 0.26
PSME4-201ENST00000389993 SLFNL1Q499Z3 407 aa16.7■□□□□ 0.26
PSME4-201ENST00000389993 KCNJ14Q9UNX9 436 aa16.7■□□□□ 0.26
PSME4-201ENST00000389993 VWA3AA6NCI4 1184 aa16.69■□□□□ 0.26
PSME4-201ENST00000389993 SPTLC2O15270 562 aa16.69■□□□□ 0.26
PSME4-201ENST00000389993 TGFBRAP1Q8WUH2 860 aa16.69■□□□□ 0.26
PSME4-201ENST00000389993 CCDC102AQ96A19 550 aa16.69■□□□□ 0.26
PSME4-201ENST00000389993 RTL1A6NKG5 1358 aa16.69■□□□□ 0.26
PSME4-201ENST00000389993 CFAP74Q9C0B2 1584 aa16.69■□□□□ 0.26
PSME4-201ENST00000389993 SPA17Q15506 151 aa16.69■□□□□ 0.26
PSME4-201ENST00000389993 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.69■□□□□ 0.262e-9■□□□□ 8
PSME4-201ENST00000389993 PUF60Q9UHX1 559 aaKnown RBP16.69■□□□□ 0.26
PSME4-201ENST00000389993 V9GYY5 206 aaPredicted RBP16.69■□□□□ 0.26
PSME4-201ENST00000389993 ANAPC15P60006 121 aa16.69■□□□□ 0.26
PSME4-201ENST00000389993 GREM2Q9H772 168 aa16.69■□□□□ 0.26
PSME4-201ENST00000389993 UBASH3AP57075 661 aa16.69■□□□□ 0.26
PSME4-201ENST00000389993 SPATA5Q8NB90 893 aa16.69■□□□□ 0.26
PSME4-201ENST00000389993 MRPS27Q92552 414 aaKnown RBP16.69■□□□□ 0.26
PSME4-201ENST00000389993 RAB34Q9BZG1 259 aa16.69■□□□□ 0.26
PSME4-201ENST00000389993 EXOC1Q9NV70 894 aa16.69■□□□□ 0.26
PSME4-201ENST00000389993 CLTCL1P53675 1640 aa16.68■□□□□ 0.26
PSME4-201ENST00000389993 CDC37L1Q7L3B6 337 aa16.68■□□□□ 0.26
PSME4-201ENST00000389993 ZNF408Q9H9D4 720 aa16.68■□□□□ 0.26
PSME4-201ENST00000389993 BCORL1Q5H9F3 1711 aa16.68■□□□□ 0.26
PSME4-201ENST00000389993 CCDC186Q7Z3E2 898 aa16.68■□□□□ 0.26
PSME4-201ENST00000389993 NPC1L1Q9UHC9 1359 aa16.68■□□□□ 0.26
PSME4-201ENST00000389993 ACBD3Q9H3P7 528 aa16.68■□□□□ 0.26
PSME4-201ENST00000389993 NLRP1Q9C000 1473 aa16.68■□□□□ 0.26
PSME4-201ENST00000389993 NEFHP12036 1026 aa16.68■□□□□ 0.26
PSME4-201ENST00000389993 KRT2P35908 639 aa16.68■□□□□ 0.26
PSME4-201ENST00000389993 BEND3Q5T5X7 828 aa16.68■□□□□ 0.26
PSME4-201ENST00000389993 V9GY48 417 aaPredicted RBP16.68■□□□□ 0.26
PSME4-201ENST00000389993 SGSM2O43147 1006 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 LETM2Q2VYF4 491 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 CHMP2AO43633 222 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 SORBS3O60504 671 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 SCNN1DP51172 638 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 STAMQ92783 540 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 ANKRD62A6NC57 917 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 N4BP3O15049 544 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 ASIC1P78348 528 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 SPDYE4A6NLX3 237 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 CTAGE5O15320 804 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 CTSWP56202 376 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 PI16Q6UXB8 463 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 SMARCC2Q8TAQ2 1214 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 TRIM37O94972 964 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 BICD1Q96G01 975 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 PIK3AP1Q6ZUJ8 805 aa16.67■□□□□ 0.26
PSME4-201ENST00000389993 CCDC12Q8WUD4 166 aaPredicted RBP16.67■□□□□ 0.26
PSME4-201ENST00000389993 ABCC4O15439 1325 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms