RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 CELF1Q92879 486 aaKnown RBP29.92■■■□□ 2.38
SHOX2-201ENST00000389589 E7EWF7 191 aa29.92■■■□□ 2.38
SHOX2-201ENST00000389589 GNL3LQ9NVN8 582 aaKnown RBP29.92■■■□□ 2.38
SHOX2-201ENST00000389589 TCRBV5S4A2TA0A5A2 114 aa29.91■■■□□ 2.38
SHOX2-201ENST00000389589 FOXP2O15409 715 aa29.91■■■□□ 2.38
SHOX2-201ENST00000389589 PDIA4P13667 645 aaKnown RBP29.91■■■□□ 2.38
SHOX2-201ENST00000389589 Q6ZUG5 572 aa29.91■■■□□ 2.38
SHOX2-201ENST00000389589 ZNF804BA4D1E1 1349 aa29.91■■■□□ 2.38
SHOX2-201ENST00000389589 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.9■■■□□ 2.38
SHOX2-201ENST00000389589 NPHP1O15259 732 aa29.9■■■□□ 2.38
SHOX2-201ENST00000389589 FGAP02671 866 aa29.9■■■□□ 2.38
SHOX2-201ENST00000389589 ST3GAL1Q11201 340 aa29.9■■■□□ 2.38
SHOX2-201ENST00000389589 WWC3Q9ULE0 1092 aa29.9■■■□□ 2.38
SHOX2-201ENST00000389589 TRIM37O94972 964 aa29.89■■■□□ 2.38
SHOX2-201ENST00000389589 GJB2P29033 226 aa29.89■■■□□ 2.38
SHOX2-201ENST00000389589 NFIXQ14938 502 aa29.89■■■□□ 2.38
SHOX2-201ENST00000389589 NECAB1Q8N987 351 aa29.89■■■□□ 2.38
SHOX2-201ENST00000389589 TNRC6CQ9HCJ0 1690 aaKnown RBP29.89■■■□□ 2.38
SHOX2-201ENST00000389589 ZNF772Q68DY9 489 aaPredicted RBP29.89■■■□□ 2.37
SHOX2-201ENST00000389589 ANKRD2Q9GZV1 360 aa29.89■■■□□ 2.37
SHOX2-201ENST00000389589 STX6O43752 255 aa29.88■■■□□ 2.37
SHOX2-201ENST00000389589 EXOSC10Q01780 885 aaKnown RBP29.88■■■□□ 2.37
SHOX2-201ENST00000389589 TTLL5Q6EMB2 1281 aa29.88■■■□□ 2.37
SHOX2-201ENST00000389589 SYT1P21579 422 aa29.87■■■□□ 2.37
SHOX2-201ENST00000389589 RBM6P78332 1123 aaKnown RBP29.87■■■□□ 2.37
SHOX2-201ENST00000389589 CAVIN4Q5BKX8 364 aa29.87■■■□□ 2.37
SHOX2-201ENST00000389589 FOXD4L5Q5VV16 416 aaPredicted RBP29.87■■■□□ 2.37
SHOX2-201ENST00000389589 FOXD4L4Q8WXT5 416 aaPredicted RBP29.87■■■□□ 2.37
SHOX2-201ENST00000389589 FGD1P98174 961 aa29.87■■■□□ 2.37
SHOX2-201ENST00000389589 LMBRD1Q9NUN5 540 aa29.86■■■□□ 2.37
SHOX2-201ENST00000389589 ZSCAN22P10073 491 aaPredicted RBP29.86■■■□□ 2.37
SHOX2-201ENST00000389589 KLHL40Q2TBA0 621 aa29.86■■■□□ 2.37
SHOX2-201ENST00000389589 CNBD1Q8NA66 436 aa29.86■■■□□ 2.37
SHOX2-201ENST00000389589 AIDAQ96BJ3 306 aa29.86■■■□□ 2.37
SHOX2-201ENST00000389589 AGXT2Q9BYV1 514 aa29.86■■■□□ 2.37
SHOX2-201ENST00000389589 MYH13Q9UKX3 1938 aa29.85■■■□□ 2.37
SHOX2-201ENST00000389589 A0A0G2JLW4 131 aa29.85■■■□□ 2.37
SHOX2-201ENST00000389589 ZNF213O14771 459 aa29.85■■■□□ 2.37
SHOX2-201ENST00000389589 TM4SF1P30408 202 aa29.85■■■□□ 2.37
SHOX2-201ENST00000389589 MAGEB6Q8N7X4 407 aa29.85■■■□□ 2.37
SHOX2-201ENST00000389589 FBXL16Q8N461 479 aa29.84■■■□□ 2.37
SHOX2-201ENST00000389589 BRF1Q92994 677 aa29.84■■■□□ 2.37
SHOX2-201ENST00000389589 GTF3C6Q969F1 213 aa29.84■■■□□ 2.37
SHOX2-201ENST00000389589 STRBPQ96SI9 672 aaKnown RBP29.84■■■□□ 2.37
SHOX2-201ENST00000389589 GZF1Q9H116 711 aaPredicted RBP29.84■■■□□ 2.37
SHOX2-201ENST00000389589 PDCP20941 246 aa29.83■■■□□ 2.37
SHOX2-201ENST00000389589 CCDC24Q8N4L8 307 aa29.83■■■□□ 2.37
SHOX2-201ENST00000389589 DDX49Q9Y6V7 483 aaKnown RBP29.83■■■□□ 2.37
SHOX2-201ENST00000389589 ZMYM6O95789 1325 aa29.83■■■□□ 2.37
SHOX2-201ENST00000389589 GYG1P46976 350 aa29.83■■■□□ 2.37
SHOX2-201ENST00000389589 VPS37DQ86XT2 251 aa29.83■■■□□ 2.37
SHOX2-201ENST00000389589 SEMA3EO15041 775 aa29.82■■■□□ 2.36
SHOX2-201ENST00000389589 GYS1P13807 737 aa29.82■■■□□ 2.36
SHOX2-201ENST00000389589 ALX1Q15699 326 aa29.82■■■□□ 2.36
SHOX2-201ENST00000389589 LRP2BPQ9P2M1 347 aa29.82■■■□□ 2.36
SHOX2-201ENST00000389589 DENND2AQ9ULE3 1009 aa29.82■■■□□ 2.36
SHOX2-201ENST00000389589 ATP6V1DQ9Y5K8 247 aa29.82■■■□□ 2.36
SHOX2-201ENST00000389589 TCHHQ07283 1943 aa29.82■■■□□ 2.36
SHOX2-201ENST00000389589 HAND2P61296 217 aa29.81■■■□□ 2.36
SHOX2-201ENST00000389589 FAM84BQ96KN1 310 aaPredicted RBP29.81■■■□□ 2.36
SHOX2-201ENST00000389589 PRPF40AO75400 957 aaKnown RBP29.8■■■□□ 2.36
SHOX2-201ENST00000389589 STK3Q13188 491 aa29.8■■■□□ 2.36
SHOX2-201ENST00000389589 NCOA7Q8NI08 942 aa29.8■■■□□ 2.36
SHOX2-201ENST00000389589 CHMP4CQ96CF2 233 aa29.8■■■□□ 2.36
SHOX2-201ENST00000389589 LRRC2Q9BYS8 371 aa29.8■■■□□ 2.36
SHOX2-201ENST00000389589 APPP05067 770 aa29.8■■■□□ 2.36
SHOX2-201ENST00000389589 GNAT2P19087 354 aa29.8■■■□□ 2.36
SHOX2-201ENST00000389589 TXNRD1Q16881 649 aa29.8■■■□□ 2.36
SHOX2-201ENST00000389589 FBXO33Q7Z6M2 555 aa29.8■■■□□ 2.36
SHOX2-201ENST00000389589 CHD4Q14839 1912 aa29.79■■■□□ 2.36
SHOX2-201ENST00000389589 WDR19Q8NEZ3 1342 aa29.79■■■□□ 2.36
SHOX2-201ENST00000389589 PATL2C9JE40 543 aaKnown RBP29.79■■■□□ 2.36
SHOX2-201ENST00000389589 PFKFB2O60825 505 aa29.79■■■□□ 2.36
SHOX2-201ENST00000389589 F13A1P00488 732 aa29.79■■■□□ 2.36
SHOX2-201ENST00000389589 MCM5P33992 734 aa29.78■■■□□ 2.36
SHOX2-201ENST00000389589 GRAPQ13588 217 aa29.78■■■□□ 2.36
SHOX2-201ENST00000389589 PRR5LQ6MZQ0 368 aa29.78■■■□□ 2.36
SHOX2-201ENST00000389589 GRAPLQ8TC17 118 aaPredicted RBP29.78■■■□□ 2.36
SHOX2-201ENST00000389589 MTMR6Q9Y217 621 aa29.78■■■□□ 2.36
SHOX2-201ENST00000389589 PDS5AQ29RF7 1337 aaKnown RBP29.78■■■□□ 2.36
SHOX2-201ENST00000389589 PNPLA7Q6ZV29 1317 aa29.78■■■□□ 2.36
SHOX2-201ENST00000389589 MBD4O95243 580 aa29.78■■■□□ 2.36
SHOX2-201ENST00000389589 LARP1BQ659C4 914 aaKnown RBP29.78■■■□□ 2.36
SHOX2-201ENST00000389589 RALYLQ86SE5 291 aaKnown RBP29.78■■■□□ 2.36
SHOX2-201ENST00000389589 LLPHQ9BRT6 129 aaKnown RBP29.78■■■□□ 2.36
SHOX2-201ENST00000389589 ZBTB22O15209 634 aa29.77■■■□□ 2.36
SHOX2-201ENST00000389589 ST5P78524 1137 aa29.77■■■□□ 2.36
SHOX2-201ENST00000389589 ZNF274Q96GC6 653 aaPredicted RBP29.77■■■□□ 2.36
SHOX2-201ENST00000389589 MB21D2Q8IYB1 491 aaPredicted RBP29.76■■■□□ 2.36
SHOX2-201ENST00000389589 IQSEC3Q9UPP2 1182 aaPredicted RBP29.76■■■□□ 2.36
SHOX2-201ENST00000389589 COL1A1P02452 1464 aaPredicted RBP29.76■■■□□ 2.35
SHOX2-201ENST00000389589 WTIPA6NIX2 430 aaPredicted RBP29.76■■■□□ 2.35
SHOX2-201ENST00000389589 TRDNQ13061 729 aa29.76■■■□□ 2.35
SHOX2-201ENST00000389589 APOBRQ0VD83 1088 aa29.75■■■□□ 2.35
SHOX2-201ENST00000389589 PLSCR1O15162 318 aa29.75■■■□□ 2.35
SHOX2-201ENST00000389589 SERPINB2P05120 415 aa29.75■■■□□ 2.35
SHOX2-201ENST00000389589 EVCP57679 992 aa29.75■■■□□ 2.35
SHOX2-201ENST00000389589 L1TD1Q5T7N2 865 aaKnown RBP29.75■■■□□ 2.35
SHOX2-201ENST00000389589 PROM2Q8N271 834 aa29.75■■■□□ 2.35
SHOX2-201ENST00000389589 ISY1Q9ULR0 285 aaKnown RBP29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms