RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 UBXN1Q04323 297 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 FAM160A1Q05DH4 1040 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 ANKRD18AQ8IVF6 992 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 GPT2Q8TD30 523 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 TNRQ92752 1358 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 MAP3K5Q99683 1374 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 A0A0D9SFI3 127 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 TMEM266Q2M3C6 531 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 PROSER3Q2NL68 480 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 MAEAQ7L5Y9 396 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 IFT81Q8WYA0 676 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 CDC5LQ99459 802 aaKnown RBP5.69□□□□□ -1.5
LTN1-202ENST00000389194 PAIP2Q9BPZ3 127 aaKnown RBP5.69□□□□□ -1.5
LTN1-202ENST00000389194 FTOQ9C0B1 505 aaKnown RBP eCLIP5.69□□□□□ -1.5
LTN1-202ENST00000389194 TBC1D7Q9P0N9 293 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 LAMC3Q9Y6N6 1575 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 ZEB2O60315 1214 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 IL15P40933 162 aaPredicted RBP5.69□□□□□ -1.5
LTN1-202ENST00000389194 ZNF827Q17R98 1081 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 ADCK5Q3MIX3 580 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 KCNG4Q8TDN1 519 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 VPS18Q9P253 973 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 NR1I2O75469 434 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 RPS6KB1P23443 525 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 ANAPC15P60006 121 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 MAP2K1Q02750 393 aaPredicted RBP5.69□□□□□ -1.5
LTN1-202ENST00000389194 TTF1Q15361 905 aaPredicted RBP5.69□□□□□ -1.5
LTN1-202ENST00000389194 TNNI3KQ59H18 835 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 ZNF790Q6PG37 636 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 TLR7Q9NYK1 1049 aaKnown RBP5.69□□□□□ -1.5
LTN1-202ENST00000389194 FPGT-TNNI3KV9GXZ4 949 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 COL17A1Q9UMD9 1497 aaPredicted RBP5.69□□□□□ -1.5
LTN1-202ENST00000389194 MAGEB6P1A0A0J9YX57 407 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 USO1O60763 962 aaKnown RBP5.69□□□□□ -1.5
LTN1-202ENST00000389194 TTLL12Q14166 644 aaPredicted RBP5.69□□□□□ -1.5
LTN1-202ENST00000389194 ELF2Q15723 593 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 ZNF496Q96IT1 587 aaPredicted RBP5.69□□□□□ -1.5
LTN1-202ENST00000389194 PLCH2O75038 1416 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 SGSM2O43147 1006 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 ITGA6P23229 1130 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 ZYXQ15942 572 aaKnown RBP5.69□□□□□ -1.5
LTN1-202ENST00000389194 UVSSAQ2YD98 709 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 CCDC152Q4G0S7 254 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 ESR2Q92731 530 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 BLZF1Q9H2G9 400 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 TMOD2Q9NZR1 351 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 CTTNBP2Q8WZ74 1663 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 ZAP70P43403 619 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 LETM2Q2VYF4 491 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 CTNND2Q9UQB3 1225 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 V9GY48 417 aaPredicted RBP5.69□□□□□ -1.5
LTN1-202ENST00000389194 TEX14Q8IWB6 1497 aa5.69□□□□□ -1.5
LTN1-202ENST00000389194 XAGE2Q96GT9 111 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 SETDB2Q96T68 719 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 USP44Q9H0E7 712 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 GPCPD1Q9NPB8 672 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 NRBP1Q9UHY1 535 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 FLT4P35916 1363 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 ABCC10Q5T3U5 1492 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 TRIM75PA6NK02 468 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 CHL1O00533 1208 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 IQCEQ6IPM2 695 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 RASEFQ8IZ41 740 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 IL17REQ8NFR9 667 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 CRNKL1Q9BZJ0 848 aaKnown RBP5.68□□□□□ -1.5
LTN1-202ENST00000389194 ZMYM4Q5VZL5 1548 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 SHTN1A0MZ66 631 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 GPAA1O43292 621 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 GRM1Q13255 1194 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 PIK3AP1Q6ZUJ8 805 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 KRT222Q8N1A0 295 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 LEO1Q8WVC0 666 aaPredicted RBP5.68□□□□□ -1.5
LTN1-202ENST00000389194 FAM212AQ96EL1 285 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 SPAG5Q96R06 1193 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 ARFGAP3Q9NP61 516 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 BTG4Q9NY30 223 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 AATFQ9NY61 560 aaKnown RBP eCLIP5.68□□□□□ -1.5
LTN1-202ENST00000389194 KIF2AO00139 706 aaPredicted RBP5.68□□□□□ -1.5
LTN1-202ENST00000389194 KIF5BP33176 963 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 FAM47AQ5JRC9 791 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 MRRFQ96E11 262 aaKnown RBP5.68□□□□□ -1.5
LTN1-202ENST00000389194 PRIMPOLQ96LW4 560 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 PIK3C2GO75747 1445 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 NPHP3Q7Z494 1330 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 TLDC2A0PJX2 215 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 PPP1R12BO60237 982 aaPredicted RBP5.68□□□□□ -1.5
LTN1-202ENST00000389194 ALDH1L1O75891 902 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 SLU7O95391 586 aaKnown RBP5.68□□□□□ -1.5
LTN1-202ENST00000389194 ADKP55263 362 aaKnown RBP5.68□□□□□ -1.5
LTN1-202ENST00000389194 SF3B2Q13435 895 aaKnown RBP5.68□□□□□ -1.5
LTN1-202ENST00000389194 PNOCQ13519 176 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 PLCD3Q8N3E9 789 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 CCDC150Q8NCX0 1101 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 EAF2Q96CJ1 260 aaPredicted RBP5.68□□□□□ -1.5
LTN1-202ENST00000389194 CARD6Q9BX69 1037 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 BMS1Q14692 1282 aaKnown RBP5.68□□□□□ -1.5
LTN1-202ENST00000389194 TTLL7Q6ZT98 887 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 C10orf67Q8IYJ2 551 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 DESI2Q9BSY9 194 aa5.68□□□□□ -1.5
LTN1-202ENST00000389194 VEZTQ9HBM0 779 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms