RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 SETDB2Q96T68 719 aa19.58■□□□□ 0.73
SGCB-201ENST00000381431 TMCO5BA8MYB1 307 aa19.58■□□□□ 0.73
SGCB-201ENST00000381431 DDB1Q16531 1140 aa19.58■□□□□ 0.73
SGCB-201ENST00000381431 HELLSQ9NRZ9 838 aa19.58■□□□□ 0.73
SGCB-201ENST00000381431 KIAA0232Q92628 1395 aa19.58■□□□□ 0.73
SGCB-201ENST00000381431 AOX1Q06278 1338 aa19.58■□□□□ 0.73
SGCB-201ENST00000381431 GCC2Q8IWJ2 1684 aa19.58■□□□□ 0.72
SGCB-201ENST00000381431 ERVK-7P63135 1459 aa19.58■□□□□ 0.72
SGCB-201ENST00000381431 BMP15O95972 392 aa19.58■□□□□ 0.72
SGCB-201ENST00000381431 ME3Q16798 604 aa19.58■□□□□ 0.72
SGCB-201ENST00000381431 MCM9Q9NXL9 1143 aa19.58■□□□□ 0.72
SGCB-201ENST00000381431 ATP10AO60312 1499 aa19.57■□□□□ 0.72
SGCB-201ENST00000381431 XAGE2Q96GT9 111 aa19.57■□□□□ 0.72
SGCB-201ENST00000381431 PLIN2Q99541 437 aa19.57■□□□□ 0.72
SGCB-201ENST00000381431 CCDC113Q9H0I3 377 aa19.57■□□□□ 0.72
SGCB-201ENST00000381431 EXOC1Q9NV70 894 aa19.57■□□□□ 0.72
SGCB-201ENST00000381431 GPAA1O43292 621 aa19.57■□□□□ 0.72
SGCB-201ENST00000381431 UNC5CLQ8IV45 518 aa19.57■□□□□ 0.72
SGCB-201ENST00000381431 LZTFL1Q9NQ48 299 aa19.57■□□□□ 0.72
SGCB-201ENST00000381431 LMAN1P49257 510 aa19.57■□□□□ 0.72
SGCB-201ENST00000381431 KRT222Q8N1A0 295 aa19.57■□□□□ 0.72
SGCB-201ENST00000381431 SMARCC1Q92922 1105 aaPredicted RBP19.57■□□□□ 0.72
SGCB-201ENST00000381431 PYM1Q9BRP8 204 aaKnown RBP19.57■□□□□ 0.72
SGCB-201ENST00000381431 ITGA6P23229 1130 aa19.56■□□□□ 0.72
SGCB-201ENST00000381431 CNKSR2Q8WXI2 1034 aa19.56■□□□□ 0.72
SGCB-201ENST00000381431 MYL10Q9BUA6 226 aa19.56■□□□□ 0.72
SGCB-201ENST00000381431 CABP5Q9NP86 173 aa19.56■□□□□ 0.72
SGCB-201ENST00000381431 USP8P40818 1118 aa19.56■□□□□ 0.72
SGCB-201ENST00000381431 ASIC1P78348 528 aa19.56■□□□□ 0.72
SGCB-201ENST00000381431 CBX8Q9HC52 389 aa19.56■□□□□ 0.72
SGCB-201ENST00000381431 GIGYF1O75420 1035 aaPredicted RBP19.56■□□□□ 0.72
SGCB-201ENST00000381431 PRDM1O75626 825 aa19.56■□□□□ 0.72
SGCB-201ENST00000381431 KIF20AO95235 890 aa19.56■□□□□ 0.72
SGCB-201ENST00000381431 SLC52A2Q9HAB3 445 aa19.56■□□□□ 0.72
SGCB-201ENST00000381431 ARFGAP3Q9NP61 516 aa19.56■□□□□ 0.72
SGCB-201ENST00000381431 SEC62Q99442 399 aaKnown RBP19.56■□□□□ 0.72
SGCB-201ENST00000381431 PSMA7O14818 248 aa19.55■□□□□ 0.72
SGCB-201ENST00000381431 SPAG1Q07617 926 aa19.55■□□□□ 0.72
SGCB-201ENST00000381431 SEPT7Q16181 437 aaKnown RBP19.55■□□□□ 0.72
SGCB-201ENST00000381431 SPECC1Q5M775 1068 aa19.55■□□□□ 0.72
SGCB-201ENST00000381431 A0A0D9SFI3 127 aa19.55■□□□□ 0.72
SGCB-201ENST00000381431 MCM7P33993 719 aa19.55■□□□□ 0.72
SGCB-201ENST00000381431 NSFL1CQ9UNZ2 370 aaKnown RBP19.55■□□□□ 0.72
SGCB-201ENST00000381431 MACROD2A1Z1Q3 448 aa19.55■□□□□ 0.72
SGCB-201ENST00000381431 PRPF4BQ13523 1007 aaKnown RBP19.55■□□□□ 0.72
SGCB-201ENST00000381431 KRI1Q8N9T8 703 aaKnown RBP19.55■□□□□ 0.72
SGCB-201ENST00000381431 APPBP2Q92624 585 aa19.55■□□□□ 0.72
SGCB-201ENST00000381431 ZFP91Q96JP5 570 aaPredicted RBP19.55■□□□□ 0.72
SGCB-201ENST00000381431 RMND1Q9NWS8 449 aa19.55■□□□□ 0.72
SGCB-201ENST00000381431 NAPAP54920 295 aa19.54■□□□□ 0.72
SGCB-201ENST00000381431 CUL5Q93034 780 aa19.54■□□□□ 0.72
SGCB-201ENST00000381431 BCCIPQ9P287 314 aaKnown RBP eCLIP19.54■□□□□ 0.72
SGCB-201ENST00000381431 ANKRD62A6NC57 917 aa19.54■□□□□ 0.72
SGCB-201ENST00000381431 MYL5Q02045 173 aa19.54■□□□□ 0.72
SGCB-201ENST00000381431 ANO1Q5XXA6 986 aa19.54■□□□□ 0.72
SGCB-201ENST00000381431 PHKBQ93100 1093 aa19.54■□□□□ 0.72
SGCB-201ENST00000381431 ALS2CR12Q96Q35 445 aa19.54■□□□□ 0.72
SGCB-201ENST00000381431 CTAGE1Q96RT6 745 aa19.54■□□□□ 0.72
SGCB-201ENST00000381431 ANGEL1Q9UNK9 670 aaKnown RBP19.54■□□□□ 0.72
SGCB-201ENST00000381431 KDM5CP41229 1560 aa19.53■□□□□ 0.72
SGCB-201ENST00000381431 PICALMQ13492 652 aa19.53■□□□□ 0.72
SGCB-201ENST00000381431 SIRT2Q8IXJ6 389 aa19.53■□□□□ 0.72
SGCB-201ENST00000381431 RASEFQ8IZ41 740 aa19.53■□□□□ 0.72
SGCB-201ENST00000381431 ARMT1Q9H993 441 aa19.53■□□□□ 0.72
SGCB-201ENST00000381431 CCDC175P0C221 793 aa19.53■□□□□ 0.72
SGCB-201ENST00000381431 FAM114A1Q8IWE2 563 aa19.53■□□□□ 0.72
SGCB-201ENST00000381431 DNAJC10Q8IXB1 793 aa19.53■□□□□ 0.72
SGCB-201ENST00000381431 CLSTN2Q9H4D0 955 aa19.53■□□□□ 0.72
SGCB-201ENST00000381431 MMRN2Q9H8L6 949 aa19.53■□□□□ 0.72
SGCB-201ENST00000381431 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.53■□□□□ 0.72
SGCB-201ENST00000381431 VWA3AA6NCI4 1184 aa19.52■□□□□ 0.72
SGCB-201ENST00000381431 GNAQP50148 359 aa19.52■□□□□ 0.72
SGCB-201ENST00000381431 ZNF174Q15697 407 aa19.52■□□□□ 0.72
SGCB-201ENST00000381431 SPAG5Q96R06 1193 aa19.52■□□□□ 0.72
SGCB-201ENST00000381431 NEURL1BA8MQ27 555 aa19.52■□□□□ 0.72
SGCB-201ENST00000381431 TAF5LO75529 589 aa19.52■□□□□ 0.72
SGCB-201ENST00000381431 GNAT2P19087 354 aa19.52■□□□□ 0.72
SGCB-201ENST00000381431 MCM3P25205 808 aa19.52■□□□□ 0.72
SGCB-201ENST00000381431 SF3B2Q13435 895 aaKnown RBP19.52■□□□□ 0.72
SGCB-201ENST00000381431 UGGT1Q9NYU2 1555 aa19.52■□□□□ 0.72
SGCB-201ENST00000381431 CEP170Q5SW79 1584 aa19.52■□□□□ 0.72
SGCB-201ENST00000381431 IFFO1Q0D2I5 559 aa19.52■□□□□ 0.72
SGCB-201ENST00000381431 TNIP1Q15025 636 aa19.52■□□□□ 0.72
SGCB-201ENST00000381431 CTAGE15A4D2H0 777 aa19.52■□□□□ 0.71
SGCB-201ENST00000381431 CTAGE8P0CG41 777 aa19.52■□□□□ 0.71
SGCB-201ENST00000381431 ZAP70P43403 619 aa19.52■□□□□ 0.71
SGCB-201ENST00000381431 CTR9Q6PD62 1173 aa19.52■□□□□ 0.71
SGCB-201ENST00000381431 CTAGE6Q86UF2 777 aa19.52■□□□□ 0.71
SGCB-201ENST00000381431 CTAGE4Q8IX94 777 aa19.52■□□□□ 0.71
SGCB-201ENST00000381431 PODXL2Q9NZ53 605 aa19.52■□□□□ 0.71
SGCB-201ENST00000381431 BEND3Q5T5X7 828 aa19.51■□□□□ 0.71
SGCB-201ENST00000381431 TM6SF1Q9BZW5 370 aa19.51■□□□□ 0.71
SGCB-201ENST00000381431 GOPCQ9HD26 462 aa19.51■□□□□ 0.71
SGCB-201ENST00000381431 SHTN1A0MZ66 631 aa19.51■□□□□ 0.71
SGCB-201ENST00000381431 HLA-DOAP06340 250 aa19.51■□□□□ 0.71
SGCB-201ENST00000381431 FEZ1Q99689 392 aa19.51■□□□□ 0.71
SGCB-201ENST00000381431 BTG4Q9NY30 223 aa19.51■□□□□ 0.71
SGCB-201ENST00000381431 DIS3L2Q8IYB7 885 aaKnown RBP19.51■□□□□ 0.71
SGCB-201ENST00000381431 TSC1Q92574 1164 aa19.51■□□□□ 0.71
SGCB-201ENST00000381431 ZNF622Q969S3 477 aaKnown RBP eCLIP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms