RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 SPATA5Q8NB90 893 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 ATG3Q9NT62 314 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 CCDC194A0A1B0GVG4 234 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 B4E1Z4 1266 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 SASH1O94885 1247 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 PICALMQ13492 652 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 POLA2Q14181 598 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 PPLO60437 1756 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 PTPDC1A2A3K4 754 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 APBA3O96018 575 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 HLA-DOAP06340 250 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 TSPY3P0CV98 308 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 TSPY8P0CW00 308 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 CBX1P83916 185 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 ZKSCAN3Q9BRR0 538 aa16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 DDX19AQ9NUU7 478 aaKnown RBP16.44■□□□□ 0.22
SHROOM1-203ENST00000378679 HAUS7Q99871 368 aa16.43■□□□□ 0.22
SHROOM1-203ENST00000378679 ZHX3Q9H4I2 956 aa16.43■□□□□ 0.22
SHROOM1-203ENST00000378679 ZNF532Q9HCE3 1301 aa16.43■□□□□ 0.22
SHROOM1-203ENST00000378679 CEP170BQ9Y4F5 1589 aaPredicted RBP16.43■□□□□ 0.22
SHROOM1-203ENST00000378679 FILIP1Q7Z7B0 1213 aa16.43■□□□□ 0.22
SHROOM1-203ENST00000378679 PDE8BO95263 885 aa16.43■□□□□ 0.22
SHROOM1-203ENST00000378679 CCDC102BQ68D86 513 aa16.43■□□□□ 0.22
SHROOM1-203ENST00000378679 FBXO3Q9UK99 471 aa16.43■□□□□ 0.22
SHROOM1-203ENST00000378679 ADORA1P30542 326 aa16.42■□□□□ 0.22
SHROOM1-203ENST00000378679 FILIP1LQ4L180 1135 aa16.42■□□□□ 0.22
SHROOM1-203ENST00000378679 RBM17Q96I25 401 aaKnown RBP16.42■□□□□ 0.22
SHROOM1-203ENST00000378679 RICTORQ6R327 1708 aa16.42■□□□□ 0.22
SHROOM1-203ENST00000378679 CCAR1Q8IX12 1150 aaKnown RBP16.42■□□□□ 0.22
SHROOM1-203ENST00000378679 EPB41L2O43491 1005 aaKnown RBP16.42■□□□□ 0.22
SHROOM1-203ENST00000378679 GIMAP6Q6P9H5 292 aa16.42■□□□□ 0.22
SHROOM1-203ENST00000378679 NCOA5Q9HCD5 579 aaKnown RBP16.41■□□□□ 0.22
SHROOM1-203ENST00000378679 CD163L1Q9NR16 1453 aa16.41■□□□□ 0.22
SHROOM1-203ENST00000378679 PRDM1O75626 825 aa16.41■□□□□ 0.22
SHROOM1-203ENST00000378679 GYG1P46976 350 aa16.41■□□□□ 0.22
SHROOM1-203ENST00000378679 BCAMP50895 628 aa16.41■□□□□ 0.22
SHROOM1-203ENST00000378679 HLFQ16534 295 aa16.41■□□□□ 0.22
SHROOM1-203ENST00000378679 DACH1Q9UI36 760 aa16.41■□□□□ 0.22
SHROOM1-203ENST00000378679 THRAP3Q9Y2W1 955 aaKnown RBP16.41■□□□□ 0.22
SHROOM1-203ENST00000378679 H7C1W4 665 aa16.41■□□□□ 0.22
SHROOM1-203ENST00000378679 ZSCAN23Q3MJ62 389 aa16.41■□□□□ 0.22
SHROOM1-203ENST00000378679 FAM196AQ6ZSG2 479 aa16.41■□□□□ 0.22
SHROOM1-203ENST00000378679 PHKA1P46020 1223 aa16.4■□□□□ 0.22
SHROOM1-203ENST00000378679 TM6SF1Q9BZW5 370 aa16.4■□□□□ 0.22
SHROOM1-203ENST00000378679 SEC31BQ9NQW1 1179 aa16.4■□□□□ 0.22
SHROOM1-203ENST00000378679 ANO10Q9NW15 660 aa16.4■□□□□ 0.22
SHROOM1-203ENST00000378679 GGA1Q9UJY5 639 aa16.4■□□□□ 0.22
SHROOM1-203ENST00000378679 ZNF76P36508 570 aa16.4■□□□□ 0.22
SHROOM1-203ENST00000378679 BIN1O00499 593 aa16.4■□□□□ 0.22
SHROOM1-203ENST00000378679 STIM1Q13586 685 aa16.4■□□□□ 0.22
SHROOM1-203ENST00000378679 DHX8Q14562 1220 aaKnown RBP16.4■□□□□ 0.22
SHROOM1-203ENST00000378679 FAM173BQ6P4H8 233 aa16.4■□□□□ 0.22
SHROOM1-203ENST00000378679 RASEFQ8IZ41 740 aa16.4■□□□□ 0.22
SHROOM1-203ENST00000378679 POLR1AO95602 1720 aaPredicted RBP16.39■□□□□ 0.21
SHROOM1-203ENST00000378679 NBPF26B4DH59 902 aa16.39■□□□□ 0.21
SHROOM1-203ENST00000378679 NBPF14Q5TI25 921 aa16.39■□□□□ 0.21
SHROOM1-203ENST00000378679 TTLL5Q6EMB2 1281 aa16.39■□□□□ 0.21
SHROOM1-203ENST00000378679 NBPF10Q6P3W6 841 aaKnown RBP16.39■□□□□ 0.21
SHROOM1-203ENST00000378679 NBPF15Q8N660 670 aa16.39■□□□□ 0.21
SHROOM1-203ENST00000378679 CNNM3Q8NE01 707 aa16.39■□□□□ 0.21
SHROOM1-203ENST00000378679 USP25Q9UHP3 1055 aa16.39■□□□□ 0.21
SHROOM1-203ENST00000378679 OGFOD1Q8N543 542 aa16.39■□□□□ 0.21
SHROOM1-203ENST00000378679 ERVV-1B6SEH8 477 aa16.39■□□□□ 0.21
SHROOM1-203ENST00000378679 PLCG2P16885 1265 aa16.39■□□□□ 0.21
SHROOM1-203ENST00000378679 MTX1Q13505 466 aa16.39■□□□□ 0.21
SHROOM1-203ENST00000378679 DACT1Q9NYF0 836 aa16.39■□□□□ 0.21
SHROOM1-203ENST00000378679 CTAGE5O15320 804 aa16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 IGSF3O75054 1194 aa16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 TRIM37O94972 964 aa16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 MAGEC2Q9UBF1 373 aaPredicted RBP16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 CIAO1O76071 339 aa16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 CHRNDQ07001 517 aa16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 ZNF830Q96NB3 372 aaPredicted RBP16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 DSCC1Q9BVC3 393 aa16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 GPR108Q9NPR9 543 aa16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 BMP2KQ9NSY1 1161 aaPredicted RBP16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 ANGEL1Q9UNK9 670 aaKnown RBP16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 PALLDQ8WX93 1383 aa16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 RIMS1Q86UR5 1692 aaKnown RBP16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 PDE6AP16499 860 aa16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 KLHL10Q6JEL2 608 aa16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 SYNE4Q8N205 404 aa16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 EYA3Q99504 573 aa16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 CABP5Q9NP86 173 aa16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 AATFQ9NY61 560 aaKnown RBP eCLIP16.38■□□□□ 0.21
SHROOM1-203ENST00000378679 WDR66Q8TBY9 1149 aa16.37■□□□□ 0.21
SHROOM1-203ENST00000378679 STK32BQ9NY57 414 aa16.37■□□□□ 0.21
SHROOM1-203ENST00000378679 HSPD1P10809 573 aaKnown RBP16.37■□□□□ 0.21
SHROOM1-203ENST00000378679 MARCKSP29966 332 aaPredicted RBP16.37■□□□□ 0.21
SHROOM1-203ENST00000378679 EPS15P42566 896 aa16.37■□□□□ 0.21
SHROOM1-203ENST00000378679 TEX11Q8IYF3 940 aa16.37■□□□□ 0.21
SHROOM1-203ENST00000378679 NOC3LQ8WTT2 800 aaKnown RBP16.37■□□□□ 0.21
SHROOM1-203ENST00000378679 MAP7D2Q96T17 732 aa16.37■□□□□ 0.21
SHROOM1-203ENST00000378679 PDCL3Q9H2J4 239 aa16.37■□□□□ 0.21
SHROOM1-203ENST00000378679 ADCY9O60503 1353 aa16.37■□□□□ 0.21
SHROOM1-203ENST00000378679 E7EWF7 191 aa16.37■□□□□ 0.21
SHROOM1-203ENST00000378679 ZNF165P49910 485 aa16.37■□□□□ 0.21
SHROOM1-203ENST00000378679 TTLL11Q8NHH1 800 aa16.37■□□□□ 0.21
SHROOM1-203ENST00000378679 ANTXR1Q9H6X2 564 aa16.37■□□□□ 0.21
SHROOM1-203ENST00000378679 SEPT12Q8IYM1 358 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms