RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 LMBR1LQ6UX01 489 aa17.28■□□□□ 0.36
PRPF18-202ENST00000378572 ZNF804AQ7Z570 1209 aa17.28■□□□□ 0.36
PRPF18-202ENST00000378572 CSRNP1Q96S65 589 aa17.28■□□□□ 0.36
PRPF18-202ENST00000378572 CD209Q9NNX6 404 aa17.28■□□□□ 0.36
PRPF18-202ENST00000378572 GRM8O00222 908 aa17.27■□□□□ 0.36
PRPF18-202ENST00000378572 RARSP54136 660 aaKnown RBP17.27■□□□□ 0.36
PRPF18-202ENST00000378572 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
PRPF18-202ENST00000378572 FOXO4P98177 505 aa17.27■□□□□ 0.36
PRPF18-202ENST00000378572 NEFLP07196 543 aa17.27■□□□□ 0.35
PRPF18-202ENST00000378572 DLGAP5Q15398 846 aa17.27■□□□□ 0.35
PRPF18-202ENST00000378572 REM2Q8IYK8 340 aaPredicted RBP17.27■□□□□ 0.35
PRPF18-202ENST00000378572 ZNF594Q96JF6 807 aaPredicted RBP17.27■□□□□ 0.35
PRPF18-202ENST00000378572 JAG2Q9Y219 1238 aa17.27■□□□□ 0.35
PRPF18-202ENST00000378572 A0A1B0GUL6 1792 aa17.26■□□□□ 0.35
PRPF18-202ENST00000378572 MMP14P50281 582 aa17.26■□□□□ 0.35
PRPF18-202ENST00000378572 MLLT1Q03111 559 aaPredicted RBP17.26■□□□□ 0.35
PRPF18-202ENST00000378572 ALDH1L2Q3SY69 923 aa17.26■□□□□ 0.35
PRPF18-202ENST00000378572 LDHAL6AQ6ZMR3 332 aa17.26■□□□□ 0.35
PRPF18-202ENST00000378572 ARMC9Q7Z3E5 817 aa17.26■□□□□ 0.35
PRPF18-202ENST00000378572 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.25■□□□□ 0.35
PRPF18-202ENST00000378572 SRCIN1Q9C0H9 1055 aa17.25■□□□□ 0.35
PRPF18-202ENST00000378572 RBM5P52756 815 aaKnown RBP eCLIP17.24■□□□□ 0.35
PRPF18-202ENST00000378572 EPHA10Q5JZY3 1008 aa17.24■□□□□ 0.35
PRPF18-202ENST00000378572 MYO1BO43795 1136 aa17.24■□□□□ 0.35
PRPF18-202ENST00000378572 VEZTQ9HBM0 779 aa17.24■□□□□ 0.35
PRPF18-202ENST00000378572 ANGEL1Q9UNK9 670 aaKnown RBP17.24■□□□□ 0.35
PRPF18-202ENST00000378572 CLRN2A0PK11 232 aa17.22■□□□□ 0.35
PRPF18-202ENST00000378572 ALDH1L1O75891 902 aa17.22■□□□□ 0.35
PRPF18-202ENST00000378572 CERS5Q8N5B7 392 aa17.22■□□□□ 0.35
PRPF18-202ENST00000378572 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
PRPF18-202ENST00000378572 BCAR3O75815 825 aa17.21■□□□□ 0.35
PRPF18-202ENST00000378572 CFAP100Q494V2 611 aa17.21■□□□□ 0.35
PRPF18-202ENST00000378572 CTU1Q7Z7A3 348 aaKnown RBP17.21■□□□□ 0.35
PRPF18-202ENST00000378572 SSH1Q8WYL5 1049 aa17.21■□□□□ 0.35
PRPF18-202ENST00000378572 DEFB129Q9H1M3 183 aa17.21■□□□□ 0.35
PRPF18-202ENST00000378572 COL1A1P02452 1464 aaPredicted RBP17.21■□□□□ 0.35
PRPF18-202ENST00000378572 TBC1D8O95759 1140 aa17.21■□□□□ 0.35
PRPF18-202ENST00000378572 PTPN12Q05209 780 aaKnown RBP17.21■□□□□ 0.35
PRPF18-202ENST00000378572 SREBF2Q12772 1141 aa17.21■□□□□ 0.35
PRPF18-202ENST00000378572 ERICH6BQ5W0A0 696 aa17.21■□□□□ 0.35
PRPF18-202ENST00000378572 C15orf52Q6ZUT6 534 aaKnown RBP17.21■□□□□ 0.35
PRPF18-202ENST00000378572 SUCLG2Q96I99 432 aa17.21■□□□□ 0.35
PRPF18-202ENST00000378572 FZD1Q9UP38 647 aa17.21■□□□□ 0.35
PRPF18-202ENST00000378572 IL1R1P14778 569 aa17.2■□□□□ 0.34
PRPF18-202ENST00000378572 PCDHAC2Q9Y5I4 1007 aa17.2■□□□□ 0.34
PRPF18-202ENST00000378572 IRS2Q9Y4H2 1338 aa17.2■□□□□ 0.34
PRPF18-202ENST00000378572 SOX10P56693 466 aa17.19■□□□□ 0.34
PRPF18-202ENST00000378572 ZBED3Q96IU2 234 aaPredicted RBP17.19■□□□□ 0.34
PRPF18-202ENST00000378572 SMC4Q9NTJ3 1288 aa17.19■□□□□ 0.34
PRPF18-202ENST00000378572 KIF16BQ96L93 1317 aa17.19■□□□□ 0.34
PRPF18-202ENST00000378572 ECM29Q5VYK3 1845 aa17.19■□□□□ 0.34
PRPF18-202ENST00000378572 PPP1R12BO60237 982 aaPredicted RBP17.18■□□□□ 0.34
PRPF18-202ENST00000378572 GYG1P46976 350 aa17.18■□□□□ 0.34
PRPF18-202ENST00000378572 VPS37DQ86XT2 251 aa17.18■□□□□ 0.34
PRPF18-202ENST00000378572 SPDYE2BA6NHP3 402 aa17.18■□□□□ 0.34
PRPF18-202ENST00000378572 SPDYE6P0CI01 402 aa17.18■□□□□ 0.34
PRPF18-202ENST00000378572 MFSD14BQ5SR56 506 aa17.18■□□□□ 0.34
PRPF18-202ENST00000378572 PPP2R3BQ9Y5P8 575 aa17.18■□□□□ 0.34
PRPF18-202ENST00000378572 FRAT2O75474 233 aaPredicted RBP17.17■□□□□ 0.34
PRPF18-202ENST00000378572 NBPF7P0C2Y1 421 aaPredicted RBP17.17■□□□□ 0.34
PRPF18-202ENST00000378572 HIBADHP31937 336 aaKnown RBP17.17■□□□□ 0.34
PRPF18-202ENST00000378572 FKBP1AP62942 108 aaKnown RBP17.17■□□□□ 0.34
PRPF18-202ENST00000378572 MTMR14Q8NCE2 650 aa17.17■□□□□ 0.34
PRPF18-202ENST00000378572 ZNF296Q8WUU4 475 aaPredicted RBP17.17■□□□□ 0.34
PRPF18-202ENST00000378572 SLC10A4Q96EP9 437 aa17.17■□□□□ 0.34
PRPF18-202ENST00000378572 PUS3Q9BZE2 481 aaKnown RBP17.17■□□□□ 0.34
PRPF18-202ENST00000378572 TTF2Q9UNY4 1162 aaKnown RBP17.17■□□□□ 0.34
PRPF18-202ENST00000378572 RGS19P49795 217 aa17.16■□□□□ 0.34
PRPF18-202ENST00000378572 CHAF1AQ13111 956 aaPredicted RBP17.16■□□□□ 0.34
PRPF18-202ENST00000378572 UBE4AQ14139 1066 aa17.16■□□□□ 0.34
PRPF18-202ENST00000378572 PDE3AQ14432 1141 aa17.16■□□□□ 0.34
PRPF18-202ENST00000378572 SUPT20HL1Q3ZLR7 823 aa17.16■□□□□ 0.34
PRPF18-202ENST00000378572 METTL24Q5JXM2 366 aa17.16■□□□□ 0.34
PRPF18-202ENST00000378572 MRPL50Q8N5N7 158 aaKnown RBP17.16■□□□□ 0.34
PRPF18-202ENST00000378572 PRMT6Q96LA8 375 aaPredicted RBP17.16■□□□□ 0.34
PRPF18-202ENST00000378572 BICC1Q9H694 974 aaKnown RBP17.16■□□□□ 0.34
PRPF18-202ENST00000378572 SPRYD7Q5W111 196 aa17.16■□□□□ 0.34
PRPF18-202ENST00000378572 IQSEC3Q9UPP2 1182 aaPredicted RBP17.16■□□□□ 0.34
PRPF18-202ENST00000378572 MROH5Q6ZUA9 1318 aa17.16■□□□□ 0.34
PRPF18-202ENST00000378572 IREB2P48200 963 aaKnown RBP17.15■□□□□ 0.34
PRPF18-202ENST00000378572 TM4SF4P48230 202 aa17.15■□□□□ 0.34
PRPF18-202ENST00000378572 SSC5DA1L4H1 1573 aa17.14■□□□□ 0.33
PRPF18-202ENST00000378572 FAM205AQ6ZU69 1335 aa17.14■□□□□ 0.33
PRPF18-202ENST00000378572 GPR25O00155 361 aa17.14■□□□□ 0.33
PRPF18-202ENST00000378572 IPO8O15397 1037 aaKnown RBP17.14■□□□□ 0.33
PRPF18-202ENST00000378572 MS4A1P11836 297 aa17.14■□□□□ 0.33
PRPF18-202ENST00000378572 TNFAIP1Q13829 316 aa17.14■□□□□ 0.33
PRPF18-202ENST00000378572 RASA3Q14644 834 aa17.14■□□□□ 0.33
PRPF18-202ENST00000378572 LDLRAD1Q5T700 205 aa17.14■□□□□ 0.33
PRPF18-202ENST00000378572 NBPF12Q5TAG4 269 aaPredicted RBP17.14■□□□□ 0.33
PRPF18-202ENST00000378572 ZKSCAN2Q63HK3 967 aa17.14■□□□□ 0.33
PRPF18-202ENST00000378572 ARHGAP45Q92619 1136 aa17.14■□□□□ 0.33
PRPF18-202ENST00000378572 CLMNQ96JQ2 1002 aa17.14■□□□□ 0.33
PRPF18-202ENST00000378572 PTPRCP08575 1304 aa17.13■□□□□ 0.33
PRPF18-202ENST00000378572 AOX1Q06278 1338 aa17.13■□□□□ 0.33
PRPF18-202ENST00000378572 MANSC4A6NHS7 340 aaPredicted RBP17.13■□□□□ 0.33
PRPF18-202ENST00000378572 CAVIN4Q5BKX8 364 aa17.13■□□□□ 0.33
PRPF18-202ENST00000378572 TDRD7Q8NHU6 1098 aaKnown RBP17.13■□□□□ 0.33
PRPF18-202ENST00000378572 KAZALD1Q96I82 304 aa17.13■□□□□ 0.33
PRPF18-202ENST00000378572 WNK4Q96J92 1243 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms