RNA–Protein interactions for RNA: ENST00000375099.3

UBXN10-201, Transcript of UBX domain protein 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN10, Length 5,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN10-201ENST00000375099 PFDN4Q9NQP4 134 aa11.08□□□□□ -0.64
UBXN10-201ENST00000375099 PYM1Q9BRP8 204 aaKnown RBP11.07□□□□□ -0.64
UBXN10-201ENST00000375099 ZSCAN16Q9H4T2 348 aaPredicted RBP11.07□□□□□ -0.64
UBXN10-201ENST00000375099 PLCB1Q9NQ66 1216 aa11.07□□□□□ -0.64
UBXN10-201ENST00000375099 ANLNQ9NQW6 1124 aa11.07□□□□□ -0.64
UBXN10-201ENST00000375099 UTP6Q9NYH9 597 aaKnown RBP11.07□□□□□ -0.64
UBXN10-201ENST00000375099 MTMR3Q13615 1198 aa11.07□□□□□ -0.64
UBXN10-201ENST00000375099 HHATQ5VTY9 493 aa11.07□□□□□ -0.64
UBXN10-201ENST00000375099 CAPRIN2Q6IMN6 1127 aaKnown RBP11.07□□□□□ -0.64
UBXN10-201ENST00000375099 ARHGAP42A6NI28 874 aa11.07□□□□□ -0.64
UBXN10-201ENST00000375099 ST13P4Q8IZP2 240 aaPredicted RBP11.07□□□□□ -0.64
UBXN10-201ENST00000375099 GNL3LQ9NVN8 582 aaKnown RBP11.07□□□□□ -0.64
UBXN10-201ENST00000375099 CHCHD3Q9NX63 227 aaKnown RBP11.07□□□□□ -0.64
UBXN10-201ENST00000375099 ATP8B1O43520 1251 aa11.07□□□□□ -0.64
UBXN10-201ENST00000375099 SPZ1Q9BXG8 430 aa11.07□□□□□ -0.64
UBXN10-201ENST00000375099 FBXO2Q9UK22 296 aaPredicted RBP11.07□□□□□ -0.64
UBXN10-201ENST00000375099 ZNF215Q9UL58 517 aaPredicted RBP11.07□□□□□ -0.64
UBXN10-201ENST00000375099 PABPN1LA6NDY0 278 aaKnown RBP11.06□□□□□ -0.64
UBXN10-201ENST00000375099 KRT10P13645 584 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 NEK2P51955 445 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 TWISTNBQ3B726 338 aaPredicted RBP11.06□□□□□ -0.64
UBXN10-201ENST00000375099 USP37Q86T82 979 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 EXOC4Q96A65 974 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 SH2D4AQ9H788 454 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 NOP53Q9NZM5 478 aaKnown RBP11.06□□□□□ -0.64
UBXN10-201ENST00000375099 ELP1O95163 1332 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 ACTN4O43707 911 aaKnown RBP11.06□□□□□ -0.64
UBXN10-201ENST00000375099 CCT4P50991 539 aaKnown RBP11.06□□□□□ -0.64
UBXN10-201ENST00000375099 ATP1A2P50993 1020 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 CNGA4Q8IV77 575 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 RPGRIP1Q96KN7 1286 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 ACTR5Q9H9F9 607 aaPredicted RBP11.06□□□□□ -0.64
UBXN10-201ENST00000375099 TTF2Q9UNY4 1162 aaKnown RBP11.06□□□□□ -0.64
UBXN10-201ENST00000375099 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
UBXN10-201ENST00000375099 BLVRAP53004 296 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 RAD51AP2Q09MP3 1159 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 TTC39AQ5SRH9 613 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 RPAP2Q8IXW5 612 aaPredicted RBP11.06□□□□□ -0.64
UBXN10-201ENST00000375099 MRPS27Q92552 414 aaKnown RBP11.06□□□□□ -0.64
UBXN10-201ENST00000375099 SNX21Q969T3 373 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 RMND1Q9NWS8 449 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 ZRANB2O95218 330 aaKnown RBP eCLIP11.06□□□□□ -0.64
UBXN10-201ENST00000375099 TERF2Q15554 542 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 KRT71Q3SY84 523 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 TMX3Q96JJ7 454 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 KRT75O95678 551 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 EEF1DP29692 281 aaKnown RBP11.06□□□□□ -0.64
UBXN10-201ENST00000375099 LMNB2Q03252 620 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 TEX11Q8IYF3 940 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 CCHCR1Q8TD31 782 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 FAM204AQ9H8W3 233 aa11.06□□□□□ -0.64
UBXN10-201ENST00000375099 MAP7D3Q8IWC1 876 aa11.05□□□□□ -0.64
UBXN10-201ENST00000375099 GEMIN8Q9NWZ8 242 aaKnown RBP11.05□□□□□ -0.64
UBXN10-201ENST00000375099 TXNDC16Q9P2K2 825 aa11.05□□□□□ -0.64
UBXN10-201ENST00000375099 DDX41Q9UJV9 622 aaKnown RBP11.05□□□□□ -0.64
UBXN10-201ENST00000375099 SOGA1O94964 1423 aa11.05□□□□□ -0.64
UBXN10-201ENST00000375099 TROVE2P10155 538 aaKnown RBP eCLIP11.05□□□□□ -0.64
UBXN10-201ENST00000375099 AMPD3Q01432 767 aa11.05□□□□□ -0.64
UBXN10-201ENST00000375099 RRAGBQ5VZM2 374 aa11.05□□□□□ -0.64
UBXN10-201ENST00000375099 PDE11AQ9HCR9 933 aa11.05□□□□□ -0.64
UBXN10-201ENST00000375099 CTTNBP2NLQ9P2B4 639 aa11.05□□□□□ -0.64
UBXN10-201ENST00000375099 ABCF2Q9UG63 623 aa11.05□□□□□ -0.64
UBXN10-201ENST00000375099 MFSD4BQ5TF39 518 aa11.05□□□□□ -0.64
UBXN10-201ENST00000375099 C16orf87Q6PH81 154 aa11.05□□□□□ -0.64
UBXN10-201ENST00000375099 HELBQ8NG08 1087 aaPredicted RBP11.05□□□□□ -0.64
UBXN10-201ENST00000375099 PNISRQ8TF01 805 aaKnown RBP11.05□□□□□ -0.64
UBXN10-201ENST00000375099 AKR1B15C9JRZ8 316 aaPredicted RBP11.05□□□□□ -0.64
UBXN10-201ENST00000375099 TRIM60Q495X7 471 aa11.05□□□□□ -0.64
UBXN10-201ENST00000375099 WDR75Q8IWA0 830 aaKnown RBP11.05□□□□□ -0.64
UBXN10-201ENST00000375099 NME8Q8N427 588 aa11.05□□□□□ -0.64
UBXN10-201ENST00000375099 STRN4Q9NRL3 753 aa11.05□□□□□ -0.64
UBXN10-201ENST00000375099 SSX2IPQ9Y2D8 614 aa11.05□□□□□ -0.64
UBXN10-201ENST00000375099 TMED10P49755 219 aaKnown RBP11.04□□□□□ -0.64
UBXN10-201ENST00000375099 NBPF20Q3BBV1 942 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 ACRBPQ8NEB7 543 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 TRAK1Q9UPV9 953 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 KDM1AO60341 852 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 S100BP04271 92 aaPredicted RBP11.04□□□□□ -0.64
UBXN10-201ENST00000375099 ZNF445P59923 1031 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 ACBD5Q5T8D3 534 aaPredicted RBP11.04□□□□□ -0.64
UBXN10-201ENST00000375099 SMC5Q8IY18 1101 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 TBC1D5Q92609 795 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 UTP11Q9Y3A2 253 aaKnown RBP11.04□□□□□ -0.64
UBXN10-201ENST00000375099 EFCAB8A8MWE9 144 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 I3L4J1 428 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 ERCC5P28715 1186 aaPredicted RBP11.04□□□□□ -0.64
UBXN10-201ENST00000375099 STX2P32856 288 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 RAP1GDS1P52306 607 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 TRAF1Q13077 416 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 CUL3Q13618 768 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 SLC30A9Q6PML9 568 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 AACSQ86V21 672 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 NGDNQ8NEJ9 315 aaKnown RBP11.04□□□□□ -0.64
UBXN10-201ENST00000375099 DDX54Q8TDD1 881 aaKnown RBP11.04□□□□□ -0.64
UBXN10-201ENST00000375099 RAB34Q9BZG1 259 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 MMRN2Q9H8L6 949 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 G3BP2Q9UN86 482 aaKnown RBP11.04□□□□□ -0.64
UBXN10-201ENST00000375099 DAAM1Q9Y4D1 1078 aa11.04□□□□□ -0.64
UBXN10-201ENST00000375099 U3KPZ7 1027 aaPredicted RBP11.04□□□□□ -0.64
UBXN10-201ENST00000375099 SCAPERQ9BY12 1400 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms