RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 COL4A1P02462 1669 aa16.57■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 IGSF3O75054 1194 aa16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 IDH1O75874 414 aaKnown RBP16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 COL9A3Q14050 684 aaPredicted RBP16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 CRY2Q49AN0 593 aa16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 CAVIN4Q5BKX8 364 aa16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 STOX1Q6ZVD7 989 aa16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 FAM84BQ96KN1 310 aaPredicted RBP16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 BRWD3Q6RI45 1802 aa16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 ZMYM6O95789 1325 aa16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 ZNF532Q9HCE3 1301 aa16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 UBR3Q6ZT12 1888 aa16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 E7EWF7 191 aa16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 GOLGA6L22H0YM25 854 aa16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 GSE1Q14687 1217 aa16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 IMMTQ16891 758 aaKnown RBP16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 SKOR2Q2VWA4 1001 aaPredicted RBP16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 PRR5LQ6MZQ0 368 aa16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 TMED8Q6PL24 325 aaPredicted RBP16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 WWC3Q9ULE0 1092 aa16.56■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 EP400Q96L91 3159 aa16.55■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 KLRG2A4D1S0 409 aaPredicted RBP16.55■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 LARGE1O95461 756 aa16.55■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 GRAPQ13588 217 aa16.55■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 GRAPLQ8TC17 118 aaPredicted RBP16.55■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 STRBPQ96SI9 672 aaKnown RBP16.55■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 DENND2AQ9ULE3 1009 aa16.55■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 TRAK2O60296 914 aa16.54■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 RXRBP28702 533 aa16.54■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 ST3GAL1Q11201 340 aa16.54■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 SMC3Q9UQE7 1217 aa16.54■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 PNPLA7Q6ZV29 1317 aa16.53■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 WDR33Q9C0J8 1336 aaKnown RBP16.53■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 SERPINB2P05120 415 aa16.53■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 WDR19Q8NEZ3 1342 aa16.53■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 IRS2Q9Y4H2 1338 aa16.53■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 PATL2C9JE40 543 aaKnown RBP16.52■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 EVCP57679 992 aa16.52■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 ST5P78524 1137 aa16.52■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 C15orf52Q6ZUT6 534 aaKnown RBP16.52■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 MAGEB6Q8N7X4 407 aa16.52■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 FLAD1Q8NFF5 587 aa16.52■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 LEMD3Q9Y2U8 911 aa16.52■□□□□ 0.24
NIPSNAP3A-201ENST00000374767 NPHP1O15259 732 aa16.52■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 GNAT2P19087 354 aa16.52■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 HOXA10P31260 410 aaPredicted RBP16.52■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 GYG1P46976 350 aa16.52■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 TTLL5Q6EMB2 1281 aa16.52■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 Q6ZUG5 572 aa16.52■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 CCDC83Q8IWF9 413 aa16.52■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 AIDAQ96BJ3 306 aa16.52■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 LARP6Q9BRS8 491 aaKnown RBP16.52■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 POLRMTO00411 1230 aaKnown RBP16.51■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 ZNF213O14771 459 aa16.51■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 CHMP4CQ96CF2 233 aa16.51■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 WTIPA6NIX2 430 aaPredicted RBP16.5■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 SYT1P21579 422 aa16.5■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 HIBADHP31937 336 aaKnown RBP16.5■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 DEKP35659 375 aaKnown RBP16.5■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 VPS37DQ86XT2 251 aa16.5■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 NLGN1Q8N2Q7 840 aa16.5■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 CCDC24Q8N4L8 307 aa16.5■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 ZNF274Q96GC6 653 aaPredicted RBP16.5■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 TCEANC2Q96MN5 208 aa16.5■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 LRP2BPQ9P2M1 347 aa16.5■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 MYH7P12883 1935 aa16.49■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 DOCK2Q92608 1830 aa16.49■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 A0A0G2JLW4 131 aa16.49■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 STX6O43752 255 aa16.49■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 PFKFB2O60825 505 aa16.49■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 BBOX1O75936 387 aa16.49■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 APBA3O96018 575 aa16.49■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 GJB2P29033 226 aa16.49■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 DDR1Q08345 913 aa16.49■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 GTF3C6Q969F1 213 aa16.49■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 LLPHQ9BRT6 129 aaKnown RBP16.49■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 A0A1B0GUL6 1792 aa16.49■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 PDCP20941 246 aa16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 MB21D2Q8IYB1 491 aaPredicted RBP16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 NECAB1Q8N987 351 aa16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 NCOA7Q8NI08 942 aa16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 RBM17Q96I25 401 aaKnown RBP16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 CRAMP1Q96RY5 1269 aa16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 LMBRD1Q9NUN5 540 aa16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 XDHP47989 1333 aa16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 ZSCAN22P10073 491 aaPredicted RBP16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 MCM5P33992 734 aa16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 ZNF827Q17R98 1081 aa16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 TMC4Q7Z404 712 aa16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 RPGRQ92834 1020 aaKnown RBP16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 BRF1Q92994 677 aa16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 TFCP2L1Q9NZI6 479 aa16.48■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 COL1A1P02452 1464 aaPredicted RBP16.47■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 TNRC6CQ9HCJ0 1690 aaKnown RBP16.47■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 GSG1L2A8MUP6 293 aa16.47■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 MBD4O95243 580 aa16.47■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 KLHL40Q2TBA0 621 aa16.47■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 IFNL3Q8IZI9 196 aa16.47■□□□□ 0.23
NIPSNAP3A-201ENST00000374767 ATP6V1DQ9Y5K8 247 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms