RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 ITPK1Q13572 414 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 PDILTQ8N807 584 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 ZNF592Q92610 1267 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 RGPD5Q99666 1765 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 IFIT3O14879 490 aaKnown RBP12.67□□□□□ -0.38
CXCL12-203ENST00000374429 PDCP20941 246 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 UBE2HP62256 183 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 CCDC173Q0VFZ6 552 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 STK38Q15208 465 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 ZBTB9Q96C00 473 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 UTP14AQ9BVJ6 771 aaKnown RBP12.67□□□□□ -0.38
CXCL12-203ENST00000374429 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.67□□□□□ -0.38
CXCL12-203ENST00000374429 FMN2Q9NZ56 1722 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 RPAP1Q9BWH6 1393 aaPredicted RBP12.67□□□□□ -0.38
CXCL12-203ENST00000374429 KRT32Q14532 448 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 SASS6Q6UVJ0 657 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 SYNE3Q6ZMZ3 975 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 FILIP1Q7Z7B0 1213 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 NKX2-3Q8TAU0 364 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 SLC4A4Q9Y6R1 1079 aa12.67□□□□□ -0.38
CXCL12-203ENST00000374429 SOS2Q07890 1332 aaPredicted RBP12.67□□□□□ -0.38
CXCL12-203ENST00000374429 F8W031 263 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-203ENST00000374429 CYP7A1P22680 504 aa12.66□□□□□ -0.38
CXCL12-203ENST00000374429 CCDC183Q5T5S1 534 aa12.66□□□□□ -0.38
CXCL12-203ENST00000374429 C8orf76Q96K31 380 aa12.66□□□□□ -0.38
CXCL12-203ENST00000374429 ANKIB1Q9P2G1 1089 aa12.66□□□□□ -0.38
CXCL12-203ENST00000374429 UBN2Q6ZU65 1347 aa12.66□□□□□ -0.38
CXCL12-203ENST00000374429 SH3TC1Q8TE82 1336 aa12.66□□□□□ -0.38
CXCL12-203ENST00000374429 NCOA3Q9Y6Q9 1424 aa12.66□□□□□ -0.38
CXCL12-203ENST00000374429 BECN2A8MW95 431 aa12.66□□□□□ -0.38
CXCL12-203ENST00000374429 RABL6Q3YEC7 729 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-203ENST00000374429 ERFEQ4G0M1 354 aa12.66□□□□□ -0.38
CXCL12-203ENST00000374429 USPL1Q5W0Q7 1092 aa12.66□□□□□ -0.38
CXCL12-203ENST00000374429 NBPF5PQ86XG9 351 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-203ENST00000374429 CCDC87Q9NVE4 849 aa12.66□□□□□ -0.38
CXCL12-203ENST00000374429 SLC26A6Q9BXS9 759 aa12.66□□□□□ -0.38
CXCL12-203ENST00000374429 ANO6Q4KMQ2 910 aa12.65□□□□□ -0.38
CXCL12-203ENST00000374429 TMEM67Q5HYA8 995 aa12.65□□□□□ -0.38
CXCL12-203ENST00000374429 C3orf67Q6ZVT6 689 aa12.65□□□□□ -0.38
CXCL12-203ENST00000374429 MED1Q15648 1581 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-203ENST00000374429 ZPR1O75312 459 aa12.65□□□□□ -0.38
CXCL12-203ENST00000374429 PDE8BO95263 885 aa12.65□□□□□ -0.38
CXCL12-203ENST00000374429 PCCAP05165 728 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-203ENST00000374429 UIMC1Q96RL1 719 aa12.65□□□□□ -0.38
CXCL12-203ENST00000374429 TOPAZ1Q8N9V7 1692 aa12.65□□□□□ -0.38
CXCL12-203ENST00000374429 XRN1Q8IZH2 1706 aaKnown RBP12.65□□□□□ -0.38
CXCL12-203ENST00000374429 PDE8AO60658 829 aa12.65□□□□□ -0.39
CXCL12-203ENST00000374429 RASGRF1Q13972 1273 aa12.65□□□□□ -0.39
CXCL12-203ENST00000374429 CCAR1Q8IX12 1150 aaKnown RBP12.65□□□□□ -0.39
CXCL12-203ENST00000374429 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.39
CXCL12-203ENST00000374429 USP28Q96RU2 1077 aa12.65□□□□□ -0.39
CXCL12-203ENST00000374429 TEX13AQ9BXU3 409 aaPredicted RBP12.65□□□□□ -0.39
CXCL12-203ENST00000374429 CCDC73Q6ZRK6 1079 aa12.64□□□□□ -0.39
CXCL12-203ENST00000374429 GTF3C6Q969F1 213 aa12.64□□□□□ -0.39
CXCL12-203ENST00000374429 ISCA1Q9BUE6 129 aa12.64□□□□□ -0.39
CXCL12-203ENST00000374429 KCNJ14Q9UNX9 436 aa12.64□□□□□ -0.39
CXCL12-203ENST00000374429 SLC5A1P13866 664 aa12.64□□□□□ -0.39
CXCL12-203ENST00000374429 DYNLL1P63167 89 aaKnown RBP12.64□□□□□ -0.39
CXCL12-203ENST00000374429 ZMYM1Q5SVZ6 1142 aa12.64□□□□□ -0.39
CXCL12-203ENST00000374429 FSIP1Q8NA03 581 aa12.64□□□□□ -0.39
CXCL12-203ENST00000374429 HMG20BQ9P0W2 317 aa12.64□□□□□ -0.39
CXCL12-203ENST00000374429 PDE6AP16499 860 aa12.63□□□□□ -0.39
CXCL12-203ENST00000374429 KLRK1P26718 216 aa12.63□□□□□ -0.39
CXCL12-203ENST00000374429 PDIA3P30101 505 aaKnown RBP12.63□□□□□ -0.39
CXCL12-203ENST00000374429 EVX2Q03828 476 aa12.63□□□□□ -0.39
CXCL12-203ENST00000374429 KIAA2012Q0VF49 1180 aa12.63□□□□□ -0.39
CXCL12-203ENST00000374429 MAP3K11Q16584 847 aa12.63□□□□□ -0.39
CXCL12-203ENST00000374429 LEO1Q8WVC0 666 aaPredicted RBP12.63□□□□□ -0.39
CXCL12-203ENST00000374429 MCM5P33992 734 aa12.63□□□□□ -0.39
CXCL12-203ENST00000374429 MAP3K12Q12852 859 aa12.63□□□□□ -0.39
CXCL12-203ENST00000374429 SPATA5Q8NB90 893 aa12.63□□□□□ -0.39
CXCL12-203ENST00000374429 NCOA7Q8NI08 942 aa12.63□□□□□ -0.39
CXCL12-203ENST00000374429 CCDC69A6NI79 296 aa12.63□□□□□ -0.39
CXCL12-203ENST00000374429 BRD2P25440 801 aaKnown RBP12.63□□□□□ -0.39
CXCL12-203ENST00000374429 CHRNDQ07001 517 aa12.63□□□□□ -0.39
CXCL12-203ENST00000374429 UTYO14607 1347 aa12.62□□□□□ -0.39
CXCL12-203ENST00000374429 GOLGA6L19H0YKK7 550 aa12.62□□□□□ -0.39
CXCL12-203ENST00000374429 KINO60870 393 aaKnown RBP12.62□□□□□ -0.39
CXCL12-203ENST00000374429 METAP2P50579 478 aaKnown RBP eCLIP12.62□□□□□ -0.39
CXCL12-203ENST00000374429 CSPP1Q1MSJ5 1256 aa12.62□□□□□ -0.39
CXCL12-203ENST00000374429 CCDC192P0DO97 292 aa12.62□□□□□ -0.39
CXCL12-203ENST00000374429 ZSCAN30Q86W11 494 aa12.62□□□□□ -0.39
CXCL12-203ENST00000374429 APPBP2Q92624 585 aa12.62□□□□□ -0.39
CXCL12-203ENST00000374429 CELF1Q92879 486 aaKnown RBP12.62□□□□□ -0.39
CXCL12-203ENST00000374429 AATFQ9NY61 560 aaKnown RBP eCLIP12.62□□□□□ -0.39
CXCL12-203ENST00000374429 CHD2O14647 1828 aaKnown RBP12.62□□□□□ -0.39
CXCL12-203ENST00000374429 NCAPD2Q15021 1401 aa12.62□□□□□ -0.39
CXCL12-203ENST00000374429 ZNF445P59923 1031 aa12.62□□□□□ -0.39
CXCL12-203ENST00000374429 CCDC152Q4G0S7 254 aa12.62□□□□□ -0.39
CXCL12-203ENST00000374429 FAM47AQ5JRC9 791 aa12.62□□□□□ -0.39
CXCL12-203ENST00000374429 TBC1D10CQ8IV04 446 aa12.62□□□□□ -0.39
CXCL12-203ENST00000374429 CTNNA3Q9UI47 895 aa12.62□□□□□ -0.39
CXCL12-203ENST00000374429 RGPD1P0DJD0 1748 aa12.62□□□□□ -0.39
CXCL12-203ENST00000374429 GOLGA8AA7E2F4 631 aa12.61□□□□□ -0.39
CXCL12-203ENST00000374429 LRRFIP1Q32MZ4 808 aaKnown RBP12.61□□□□□ -0.39
CXCL12-203ENST00000374429 ANKRD18AQ8IVF6 992 aa12.61□□□□□ -0.39
CXCL12-203ENST00000374429 LCORLQ8N3X6 602 aa12.61□□□□□ -0.39
CXCL12-203ENST00000374429 TRIM29Q14134 588 aa12.61□□□□□ -0.39
CXCL12-203ENST00000374429 NSUN7Q8NE18 718 aaKnown RBP12.61□□□□□ -0.39
CXCL12-203ENST00000374429 SETDB2Q96T68 719 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms