RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 BICDL1Q6ZP65 573 aa18.84■□□□□ 0.61
CNKSR1-202ENST00000374253 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.84■□□□□ 0.61
CNKSR1-202ENST00000374253 WTIPA6NIX2 430 aaPredicted RBP18.84■□□□□ 0.61
CNKSR1-202ENST00000374253 CLCN1P35523 988 aa18.84■□□□□ 0.61
CNKSR1-202ENST00000374253 FAM182BQ5T319 152 aa18.84■□□□□ 0.61
CNKSR1-202ENST00000374253 C8orf37Q96NL8 207 aa18.84■□□□□ 0.61
CNKSR1-202ENST00000374253 SPEF2Q9C093 1822 aa18.84■□□□□ 0.61
CNKSR1-202ENST00000374253 ZNF213O14771 459 aa18.83■□□□□ 0.61
CNKSR1-202ENST00000374253 PRC1O43663 620 aa18.83■□□□□ 0.61
CNKSR1-202ENST00000374253 RESTQ13127 1097 aa18.83■□□□□ 0.61
CNKSR1-202ENST00000374253 SMARCC2Q8TAQ2 1214 aa18.83■□□□□ 0.61
CNKSR1-202ENST00000374253 LEO1Q8WVC0 666 aaPredicted RBP18.83■□□□□ 0.61
CNKSR1-202ENST00000374253 INCENPQ9NQS7 918 aa18.83■□□□□ 0.61
CNKSR1-202ENST00000374253 CTNNA3Q9UI47 895 aa18.83■□□□□ 0.61
CNKSR1-202ENST00000374253 THRAP3Q9Y2W1 955 aaKnown RBP18.83■□□□□ 0.61
CNKSR1-202ENST00000374253 OTUD7BQ6GQQ9 843 aa18.83■□□□□ 0.6
CNKSR1-202ENST00000374253 LPIN2Q92539 896 aa18.83■□□□□ 0.6
CNKSR1-202ENST00000374253 PDLIM2Q96JY6 352 aa18.83■□□□□ 0.6
CNKSR1-202ENST00000374253 GOLGA6L4A6NEF3 574 aa18.82■□□□□ 0.6
CNKSR1-202ENST00000374253 PDE6AP16499 860 aa18.82■□□□□ 0.6
CNKSR1-202ENST00000374253 BCAMP50895 628 aa18.82■□□□□ 0.6
CNKSR1-202ENST00000374253 RASGRF1Q13972 1273 aa18.82■□□□□ 0.6
CNKSR1-202ENST00000374253 AGXT2Q9BYV1 514 aa18.82■□□□□ 0.6
CNKSR1-202ENST00000374253 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.82■□□□□ 0.6
CNKSR1-202ENST00000374253 ANTXR2P58335 489 aa18.82■□□□□ 0.6
CNKSR1-202ENST00000374253 NBPF3Q9H094 633 aa18.82■□□□□ 0.6
CNKSR1-202ENST00000374253 KDM4AO75164 1064 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 FGFR2P21802 821 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 PLCB2Q00722 1185 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 STK11IPQ8N1F8 1099 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 USP25Q9UHP3 1055 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 NRAPQ86VF7 1730 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 KLF18A0A0U1RQI7 1052 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 NTSR2O95665 410 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 C3orf67Q6ZVT6 689 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 RALYLQ86SE5 291 aaKnown RBP18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 TBC1D10CQ8IV04 446 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 CKAP2LQ8IYA6 745 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 MAGEB6Q8N7X4 407 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 SPATA5Q8NB90 893 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 GJB4Q9NTQ9 266 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 MROH5Q6ZUA9 1318 aa18.81■□□□□ 0.6
CNKSR1-202ENST00000374253 RXRAP19793 462 aa18.8■□□□□ 0.6
CNKSR1-202ENST00000374253 MB21D2Q8IYB1 491 aaPredicted RBP18.8■□□□□ 0.6
CNKSR1-202ENST00000374253 LINC00116Q8NCU8 138 aa18.8■□□□□ 0.6
CNKSR1-202ENST00000374253 PGBD1Q96JS3 809 aa18.8■□□□□ 0.6
CNKSR1-202ENST00000374253 DACT1Q9NYF0 836 aa18.8■□□□□ 0.6
CNKSR1-202ENST00000374253 MYH7P12883 1935 aa18.8■□□□□ 0.6
CNKSR1-202ENST00000374253 GOLGA8BA8MQT2 603 aa18.8■□□□□ 0.6
CNKSR1-202ENST00000374253 SLC5A1P13866 664 aa18.8■□□□□ 0.6
CNKSR1-202ENST00000374253 ARID4AP29374 1257 aaPredicted RBP18.8■□□□□ 0.6
CNKSR1-202ENST00000374253 LTBP4Q8N2S1 1624 aa18.8■□□□□ 0.6
CNKSR1-202ENST00000374253 CCDC24Q8N4L8 307 aa18.8■□□□□ 0.6
CNKSR1-202ENST00000374253 SCAND2PQ9GZW5 306 aaPredicted RBP18.8■□□□□ 0.6
CNKSR1-202ENST00000374253 MCM5P33992 734 aa18.79■□□□□ 0.6
CNKSR1-202ENST00000374253 TTF1Q15361 905 aaPredicted RBP18.79■□□□□ 0.6
CNKSR1-202ENST00000374253 NCOA7Q8NI08 942 aa18.79■□□□□ 0.6
CNKSR1-202ENST00000374253 BICD2Q8TD16 824 aa18.79■□□□□ 0.6
CNKSR1-202ENST00000374253 COL4A1P02462 1669 aa18.79■□□□□ 0.6
CNKSR1-202ENST00000374253 FDPSP14324 419 aaKnown RBP18.79■□□□□ 0.6
CNKSR1-202ENST00000374253 CCDC152Q4G0S7 254 aa18.79■□□□□ 0.6
CNKSR1-202ENST00000374253 AIDAQ96BJ3 306 aa18.79■□□□□ 0.6
CNKSR1-202ENST00000374253 NGLY1Q96IV0 654 aa18.79■□□□□ 0.6
CNKSR1-202ENST00000374253 LLPHQ9BRT6 129 aaKnown RBP18.79■□□□□ 0.6
CNKSR1-202ENST00000374253 IGHMBP2P38935 993 aaKnown RBP18.78■□□□□ 0.6
CNKSR1-202ENST00000374253 ERFEQ4G0M1 354 aa18.78■□□□□ 0.6
CNKSR1-202ENST00000374253 ZSCAN25Q6NSZ9 544 aa18.78■□□□□ 0.6
CNKSR1-202ENST00000374253 ZSCAN30Q86W11 494 aa18.78■□□□□ 0.6
CNKSR1-202ENST00000374253 TICAM2Q86XR7 235 aa18.78■□□□□ 0.6
CNKSR1-202ENST00000374253 ZNF274Q96GC6 653 aaPredicted RBP18.78■□□□□ 0.6
CNKSR1-202ENST00000374253 ARMT1Q9H993 441 aa18.78■□□□□ 0.6
CNKSR1-202ENST00000374253 SENP2Q9HC62 589 aa18.78■□□□□ 0.6
CNKSR1-202ENST00000374253 ANO8Q9HCE9 1232 aaPredicted RBP18.78■□□□□ 0.6
CNKSR1-202ENST00000374253 ABCC12Q96J65 1359 aa18.78■□□□□ 0.6
CNKSR1-202ENST00000374253 TCRBV5S4A2TA0A5A2 114 aa18.78■□□□□ 0.6
CNKSR1-202ENST00000374253 NR1I2O75469 434 aa18.78■□□□□ 0.6
CNKSR1-202ENST00000374253 EP400Q96L91 3159 aa18.78■□□□□ 0.6
CNKSR1-202ENST00000374253 ELP1O95163 1332 aa18.78■□□□□ 0.6
CNKSR1-202ENST00000374253 B4E1Z4 1266 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 MBD4O95243 580 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 UQCRFS1P1P0C7P4 283 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 CHRNDQ07001 517 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 CYB5R4Q7L1T6 521 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 CCDC144CPQ8IYA2 1237 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 ZNF512BQ96KM6 892 aaPredicted RBP18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 FUCA2Q9BTY2 467 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 NUP62CLQ9H1M0 184 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 CARMIL3Q8ND23 1372 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 SALL1Q9NSC2 1324 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 PRKAB2O43741 272 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 HMGN5P82970 282 aaKnown RBP18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 UBE3CQ15386 1083 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 PARP10Q53GL7 1025 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 MIGA1Q8NAN2 632 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 HPS5Q9UPZ3 1129 aa18.77■□□□□ 0.6
CNKSR1-202ENST00000374253 TAF1P21675 1872 aa18.77■□□□□ 0.59
CNKSR1-202ENST00000374253 LETM1O95202 739 aaPredicted RBP18.76■□□□□ 0.59
CNKSR1-202ENST00000374253 PDIA4P13667 645 aaKnown RBP18.76■□□□□ 0.59
CNKSR1-202ENST00000374253 MSNP26038 577 aaKnown RBP18.76■□□□□ 0.59
CNKSR1-202ENST00000374253 CTDSPL2Q05D32 466 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms