RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 VEGFAP15692 232 aaPredicted RBP23.32■■□□□ 1.32
COL16A1-201ENST00000373667 TTC39AQ5SRH9 613 aa23.32■■□□□ 1.32
COL16A1-201ENST00000373667 ANKRD45Q5TZF3 282 aa23.32■■□□□ 1.32
COL16A1-201ENST00000373667 L3MBTL3Q96JM7 780 aaPredicted RBP23.32■■□□□ 1.32
COL16A1-201ENST00000373667 TLR7Q9NYK1 1049 aaKnown RBP23.32■■□□□ 1.32
COL16A1-201ENST00000373667 DBNLQ9UJU6 430 aaKnown RBP23.32■■□□□ 1.32
COL16A1-201ENST00000373667 RPS12P25398 132 aaKnown RBP23.31■■□□□ 1.32
COL16A1-201ENST00000373667 CNOT7Q9UIV1 285 aaKnown RBP23.31■■□□□ 1.32
COL16A1-201ENST00000373667 HACL1Q9UJ83 578 aa23.31■■□□□ 1.32
COL16A1-201ENST00000373667 FAM205AQ6ZU69 1335 aa23.31■■□□□ 1.32
COL16A1-201ENST00000373667 ARAP2Q8WZ64 1704 aa23.3■■□□□ 1.32
COL16A1-201ENST00000373667 IQCA1LA6NCM1 817 aa23.3■■□□□ 1.32
COL16A1-201ENST00000373667 POTECB2RU33 542 aa23.3■■□□□ 1.32
COL16A1-201ENST00000373667 EPS15P42566 896 aa23.3■■□□□ 1.32
COL16A1-201ENST00000373667 SCNN1DP51172 638 aa23.3■■□□□ 1.32
COL16A1-201ENST00000373667 AGBL3Q8NEM8 1001 aa23.3■■□□□ 1.32
COL16A1-201ENST00000373667 DENND2AQ9ULE3 1009 aa23.3■■□□□ 1.32
COL16A1-201ENST00000373667 H7C1D1 291 aa23.29■■□□□ 1.32
COL16A1-201ENST00000373667 UQCRFS1P1P0C7P4 283 aa23.29■■□□□ 1.32
COL16A1-201ENST00000373667 B4GALNT3Q6L9W6 998 aa23.29■■□□□ 1.32
COL16A1-201ENST00000373667 DPF2Q92785 391 aa23.29■■□□□ 1.32
COL16A1-201ENST00000373667 GPRC5DQ9NZD1 345 aa23.29■■□□□ 1.32
COL16A1-201ENST00000373667 F8W031 263 aaPredicted RBP23.28■■□□□ 1.32
COL16A1-201ENST00000373667 SEMA3EO15041 775 aa23.28■■□□□ 1.32
COL16A1-201ENST00000373667 MFSD14BQ5SR56 506 aa23.28■■□□□ 1.32
COL16A1-201ENST00000373667 MICALL2Q8IY33 904 aa23.28■■□□□ 1.32
COL16A1-201ENST00000373667 PSME4Q14997 1843 aa23.28■■□□□ 1.32
COL16A1-201ENST00000373667 MYO3BQ8WXR4 1341 aa23.28■■□□□ 1.32
COL16A1-201ENST00000373667 WDR90Q96KV7 1748 aa23.28■■□□□ 1.32
COL16A1-201ENST00000373667 SHTN1A0MZ66 631 aa23.27■■□□□ 1.32
COL16A1-201ENST00000373667 RASGRF1Q13972 1273 aa23.27■■□□□ 1.32
COL16A1-201ENST00000373667 RBM26Q5T8P6 1007 aaKnown RBP23.27■■□□□ 1.32
COL16A1-201ENST00000373667 KIAA0825Q8IV33 1275 aa23.27■■□□□ 1.32
COL16A1-201ENST00000373667 CERS5Q8N5B7 392 aa23.27■■□□□ 1.32
COL16A1-201ENST00000373667 WDR66Q8TBY9 1149 aa23.27■■□□□ 1.32
COL16A1-201ENST00000373667 TBC1D22AQ8WUA7 517 aa23.27■■□□□ 1.32
COL16A1-201ENST00000373667 GMLQ99445 158 aa23.27■■□□□ 1.32
COL16A1-201ENST00000373667 USP17L8P0C7I0 530 aa23.26■■□□□ 1.31
COL16A1-201ENST00000373667 ARID4AP29374 1257 aaPredicted RBP23.26■■□□□ 1.31
COL16A1-201ENST00000373667 EPHX2P34913 555 aa23.26■■□□□ 1.31
COL16A1-201ENST00000373667 FKBP1AP62942 108 aaKnown RBP23.26■■□□□ 1.31
COL16A1-201ENST00000373667 C16orf71Q8IYS4 520 aaPredicted RBP23.26■■□□□ 1.31
COL16A1-201ENST00000373667 TAF1DQ9H5J8 278 aaPredicted RBP23.26■■□□□ 1.31
COL16A1-201ENST00000373667 SNRKQ9NRH2 765 aa23.26■■□□□ 1.31
COL16A1-201ENST00000373667 HMG20BQ9P0W2 317 aa23.26■■□□□ 1.31
COL16A1-201ENST00000373667 MYH13Q9UKX3 1938 aa23.25■■□□□ 1.31
COL16A1-201ENST00000373667 EAPPQ56P03 285 aaPredicted RBP23.25■■□□□ 1.31
COL16A1-201ENST00000373667 SMC5Q8IY18 1101 aa23.25■■□□□ 1.31
COL16A1-201ENST00000373667 OGFOD1Q8N543 542 aa23.25■■□□□ 1.31
COL16A1-201ENST00000373667 SPATA5Q8NB90 893 aa23.25■■□□□ 1.31
COL16A1-201ENST00000373667 MCAMP43121 646 aa23.24■■□□□ 1.31
COL16A1-201ENST00000373667 SCARF1Q14162 830 aa23.24■■□□□ 1.31
COL16A1-201ENST00000373667 PI16Q6UXB8 463 aa23.24■■□□□ 1.31
COL16A1-201ENST00000373667 ADARB2Q9NS39 739 aaKnown RBP23.24■■□□□ 1.31
COL16A1-201ENST00000373667 HDAC9Q9UKV0 1011 aa23.24■■□□□ 1.31
COL16A1-201ENST00000373667 SCN4AP35499 1836 aa23.24■■□□□ 1.31
COL16A1-201ENST00000373667 TBC1D10BQ4KMP7 808 aaPredicted RBP23.23■■□□□ 1.31
COL16A1-201ENST00000373667 SAMD7Q7Z3H4 446 aa23.23■■□□□ 1.31
COL16A1-201ENST00000373667 ABCF2Q9UG63 623 aa23.23■■□□□ 1.31
COL16A1-201ENST00000373667 CLEC11AQ9Y240 323 aa23.23■■□□□ 1.31
COL16A1-201ENST00000373667 KIF3CO14782 793 aa23.22■■□□□ 1.31
COL16A1-201ENST00000373667 GRIK5Q16478 980 aa23.22■■□□□ 1.31
COL16A1-201ENST00000373667 ZNF512BQ96KM6 892 aaPredicted RBP23.22■■□□□ 1.31
COL16A1-201ENST00000373667 LNPKQ9C0E8 428 aa23.22■■□□□ 1.31
COL16A1-201ENST00000373667 TTF2Q9UNY4 1162 aaKnown RBP23.22■■□□□ 1.31
COL16A1-201ENST00000373667 COL1A1P02452 1464 aaPredicted RBP23.22■■□□□ 1.31
COL16A1-201ENST00000373667 ZNF646O15015 1829 aaPredicted RBP23.22■■□□□ 1.31
COL16A1-201ENST00000373667 PNMA8AQ86V59 439 aaPredicted RBP23.21■■□□□ 1.31
COL16A1-201ENST00000373667 GPATCH3Q96I76 525 aa23.21■■□□□ 1.31
COL16A1-201ENST00000373667 PDS5AQ29RF7 1337 aaKnown RBP23.2■■□□□ 1.3
COL16A1-201ENST00000373667 ZBTB22O15209 634 aa23.2■■□□□ 1.3
COL16A1-201ENST00000373667 LDHBP07195 334 aaKnown RBP23.2■■□□□ 1.3
COL16A1-201ENST00000373667 ZAP70P43403 619 aa23.2■■□□□ 1.3
COL16A1-201ENST00000373667 RBM5P52756 815 aaKnown RBP eCLIP23.2■■□□□ 1.3
COL16A1-201ENST00000373667 ZNF280AP59817 542 aaPredicted RBP23.2■■□□□ 1.3
COL16A1-201ENST00000373667 TBC1D9Q6ZT07 1266 aa23.2■■□□□ 1.3
COL16A1-201ENST00000373667 USP50Q70EL3 339 aaPredicted RBP23.2■■□□□ 1.3
COL16A1-201ENST00000373667 ZGPATQ8N5A5 531 aaKnown RBP23.2■■□□□ 1.3
COL16A1-201ENST00000373667 MYOZ2Q9NPC6 264 aa23.2■■□□□ 1.3
COL16A1-201ENST00000373667 NUCB1Q02818 461 aa23.19■■□□□ 1.3
COL16A1-201ENST00000373667 SPTY2D1Q68D10 685 aaPredicted RBP23.19■■□□□ 1.3
COL16A1-201ENST00000373667 CHD1LQ86WJ1 897 aa23.19■■□□□ 1.3
COL16A1-201ENST00000373667 TRPM4Q8TD43 1214 aa23.19■■□□□ 1.3
COL16A1-201ENST00000373667 CCDC136Q96JN2 1154 aa23.19■■□□□ 1.3
COL16A1-201ENST00000373667 BOLA2Q9H3K6 86 aa23.19■■□□□ 1.3
COL16A1-201ENST00000373667 ECHDC1Q9NTX5 307 aa23.19■■□□□ 1.3
COL16A1-201ENST00000373667 NDUFB9Q9Y6M9 179 aa23.19■■□□□ 1.3
COL16A1-201ENST00000373667 SALL1Q9NSC2 1324 aa23.18■■□□□ 1.3
COL16A1-201ENST00000373667 EGFRP00533 1210 aa23.18■■□□□ 1.3
COL16A1-201ENST00000373667 PRDX5P30044 214 aa23.18■■□□□ 1.3
COL16A1-201ENST00000373667 MMP14P50281 582 aa23.18■■□□□ 1.3
COL16A1-201ENST00000373667 KIF4BQ2VIQ3 1234 aa23.18■■□□□ 1.3
COL16A1-201ENST00000373667 OTUD7AQ8TE49 926 aaPredicted RBP23.18■■□□□ 1.3
COL16A1-201ENST00000373667 SUGT1Q9Y2Z0 365 aa23.18■■□□□ 1.3
COL16A1-201ENST00000373667 CYP2E1P05181 493 aaPredicted RBP23.17■■□□□ 1.3
COL16A1-201ENST00000373667 POTEIP0CG38 1075 aa23.17■■□□□ 1.3
COL16A1-201ENST00000373667 POTEJP0CG39 1038 aa23.17■■□□□ 1.3
COL16A1-201ENST00000373667 ATP5JP18859 108 aa23.17■■□□□ 1.3
COL16A1-201ENST00000373667 HIRAP54198 1017 aaPredicted RBP23.17■■□□□ 1.3
COL16A1-201ENST00000373667 DLGAP5Q15398 846 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms